Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq25488 82.4 5e-11
>seq25488
Length=371609
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588
|| || || |||||||| ||||||| | ||| |||| || | || || ||| | ||
Sbjct 181523 TCCTTCTGGATATTATAGTCGGCCAGAGTACGTCCATCCTCGAGCTGCTTACCGGCGAAG 181464
Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648
|| | || ||||| |||| || | |||||| ||||| || || |||| |||
Sbjct 181463 ATAAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAA-CGTT 181405
Query 39649 GCTACTG-TGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707
| | || | || | | |||||| |||| ||||| || || ||||||| ||||| ||
Sbjct 181404 GTCAATGGTATCGGAGGATTCCACCTCCAGGGTAATCGTCTTCCCCGTTAGGGTTTTCAC 181345
Query 39708 GAAGATCTGCAT 39719
||||||||||||
Sbjct 181344 GAAGATCTGCAT 181333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347060964498566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |