Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq42335 226 2e-53
seq20799 197 1e-44
seq56765 141 7e-28
seq41242 131 1e-24
seq60508 127 2e-23
seq46817 114 1e-19
seq40947 113 4e-19
seq38797 105 5e-17
seq13230 105 5e-17
seq58518 95.1 1e-13
seq2942 95.1 1e-13
seq56985 93.3 3e-13
seq36358 89.7 4e-12
>seq42335
Length=1173052
Score = 226 bits (250), Expect = 2e-53
Identities = 578/871 (66%), Gaps = 14/871 (2%)
Strand=Plus/Plus
Query 551736 GACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGAT 551795
|||||| |||| || | | ||||| || ||||| || ||||| ||| |||
Sbjct 369973 GACGTATCTCTGCTGACCATTGAAGAGGGCATCTTTGAGGTCAAGGCTACAGCTGGTGAT 370032
Query 551796 TCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATT 551853
|||||||||| || |||||||||||||| || |||| | || | |||| |||| |
Sbjct 370033 ACTCATCTTGGAGGTGAAGATTTTGATAACAGGTTGGTCAACCAC--TTTGTTCAAGAGT 370090
Query 551854 TTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAA 551913
| || | || |||||| ||| | | | | ||| |||||| | || | ||||
Sbjct 370091 TCAAGAGGAAGAACAAAAAGGATATTAGTGGAAATCCCAGGGCTCTTAGGCGGTTGAGAA 370150
Query 551914 CTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAG 551973
|||| || || ||||| || || || | || ||| | | || ||||| || ||| | |
Sbjct 370151 CTGCCTGTGAGAGAGCGAAGAGAACTTTATCGTCTACTGCACAGACCACCATCGAAATCG 370210
Query 551974 ATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATA 552033
|||| | |||||||| ||||||| || | | ||| | | || | ||||| ||
Sbjct 370211 ATTCTCTCTTTGAGGGCATTGATTTCTATTCAACAATTACTCGTGCTAGGTTTGAGGAGC 370270
Query 552034 TTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TAAGAGATTCA 552092
|| ||||| || |||||| || ||||| || || |||| | ||||| |
Sbjct 370271 TTAACATGGATCTATTCAGAAAATGCATGGAACCTGTCGAG-AAGTGCCTCCGAGATGCT 370329
Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152
||||| || || || ||||||| | || ||||||||||||||||| | || |||
Sbjct 370330 AAGATGGACAAGAGCACTATACATGATGTAGTTCTTGTTGGTGGATCTACTCGTATACCT 370389
Query 552153 AAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG--T 552208
| | ||| || || | ||| | | |||||||| || | | || ||| | |
Sbjct 370390 AGAGTTCAACAATTGCTGCAAGATTTC--TTCAATGGAAAGGAGCTT--TGCAAGAGCAT 370445
Query 552209 TAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA 552268
||||||||||||||||| || ||||||||||| | |||||||||||| | ||| |
Sbjct 370446 AAATCCAGATGAGGCTGTCGCTTATGGTGCCGCGGTCCAAGCAGCTATTTTGAGTGGGGA 370505
Query 552269 AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328
|||| || | || || || | || | || || || || |||||||| || ||
Sbjct 370506 GGGCAATGAGAAGGTGCAGGATCTTTTGCTGCTCGACGTCACCCCGCTATCTCTAGGCTT 370565
Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388
|| |||| || || | |||||| ||| || ||| || || ||||||||| ||
Sbjct 370566 GGAGACAGCCGGCGGCGTCATGACTGTTCTGATTCCTAGGAACACAACTATTCCTACAAA 370625
Query 552389 AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTT 552448
|| | || || || || || || || ||||| | | ||| || || |||
Sbjct 370626 GAAGGAGCAAGTCTTCTCCACCTACTCTGACAATCAGCCAGGTGTGTTGATCCAGGTTTA 370685
Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508
||||||||| |||| | || |||||||| || || || | ||| | | ||
Sbjct 370686 TGAAGGAGAGAGAACACGAACAAAAGATAACAACTTGCTAGGCAAATTTGAGCTCTCTGG 370745
Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568
|||||||| ||||| | || || || || ||| ||| || ||||| ||||||||
Sbjct 370746 CATTCCTCCAGCTCCAAGAGGCGTCCCTCAGATTACCGTTTGCTTTGATATTGATGCCAA 370805
Query 552569 TGGAATTTTGAATGTGACTGCTTGTGATAAA 552599
||| || ||||||| ||||| ||||||
Sbjct 370806 TGGCATCCTGAATGTCTCTGCTGAGGATAAA 370836
Score = 149 bits (164), Expect = 5e-30
Identities = 252/360 (70%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240
||||||||||| || |||||||| || || | |||||| ||||||| |||||||||
Sbjct 369553 GATGCTAAACGCTTGATTGGAAGGAGATTCAGTGATTCTCCTGTTCAAAGTGATATGAAG 369612
Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAA--ACCTTAT-ATTGAAGCTACTCAT 550297
||||| ||| | ||||| || ||||| | | | ||| |||| | | |
Sbjct 369613 ATGTGGCCATTCAAGGTTGTTGCTGGACCTGGAGATAAGCCTATGATTGTTGTTCAGTAC 369672
Query 550298 GAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATG 550357
| || | || || ||| | | || | ||||| || ||||||||||| || |||
Sbjct 369673 AAGGGTGAGGAGAAGCAGTTTGCTGCTGAGGAGATTTCCTCAATGGTTTTAATTAAGATG 369732
Query 550358 AAACAAACAGCCAGTGCTTTTGTTGGT-CAAGAAGTTACGGATGCAGTAATAACTGTACC 550416
|| | | || || | |||| | | || | | | ||||||| | ||||| ||
Sbjct 369733 AAGGAGATTGCTGAAGCCTACCTTGGAGCGACAA-TCAAGAATGCAGTTGTTACTGTTCC 369791
Query 550417 AGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACT 550476
|| || || ||||| ||||| || |||||||| || |||||||| ||||||||| ||
Sbjct 369792 TGCCTACTTCAATGATTCACAGCGCCAAGCTACCAAGGATGCTGGTGTTATTGCTGGCCT 369851
Query 550477 TAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
|||||| | || ||||||||||| ||||||||||| || | || ||||| ||||||||
Sbjct 369852 TAATGTCATGCGCATTATCAATGAGCCTACTGCTGCAGCCATAGCCTATGGTCTTGATAA 369911
>seq20799
Length=908468
Score = 197 bits (218), Expect = 1e-44
Identities = 450/671 (67%), Gaps = 12/671 (2%)
Strand=Plus/Minus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
|||||||||||||| ||||| |||||| ||||||| || | | || || || |||||
Sbjct 594269 AGAACTGCTTGCGAGAGAGCAAAACGAACTCTTTCCTCCACTGCCCAGACTACCATTGAG 594210
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
| ||||| | | ||||| ||||||| ||||| | ||| | | || | ||||||
Sbjct 594209 ATCGATTCTCTTTACGAGGGGATTGATTTCTATACGACCATTACTCGAGCTAGATTTGAG 594150
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTAAGAGA 552088
|| | |||||||| || || || || || || || |||| ||| |||||
Sbjct 594149 GAGCTCAACATGGATCTCTTCAGGAAGTGCATGGAGCCGGTCGAG-AAGTGTTTGAGAGA 594091
Query 552089 TTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAAT 552148
| | ||||| || || || || ||||| |||| ||||| || ||||| ||||| ||
Sbjct 594090 TGCGAAGATGGACAAGAACAGTGTTCATGATGTTGTTCTTGTCGGAGGATCAACAAGGAT 594031
Query 552149 TCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG- 552207
||| ||| ||| | || | || |||||||| || || | || ||| |
Sbjct 594030 TCCCAAAGTTCAGCAGCTGCTGCAGGATTTCTTCAATGGGAAGGAACTC--TGCAAGAGC 593973
Query 552208 -TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266
|||| || ||||| ||||| || ||||| || || | ||||| || || | |||
Sbjct 593972 ATTAACCCCGATGAAGCTGTGGCTTATGGAGCAGCTGTGCAAGCTGCAATCTTGAGCGGA 593913
Query 552267 CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326
| |||| || |||| || || | ||| | ||||||||||| || ||||||||
Sbjct 593912 GAGGGGAATGAGAAGGTACAGGATCTTCTCCTTCTCGATGTTACTCCCCTCTCTCTTGGC 593853
Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386
|| || || | ||| ||| |||||||| || || || || || || |||||
Sbjct 593852 TTGGAGACCGCTGGCGGTGTTATGACTGTACTGATTCCGAGGAACACCACCATTCCCACC 593793
Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446
|| ||| | ||||| ||||| || || ||||| || | | ||| ||| ||| |
Sbjct 593792 AAGAAAGAGCAGGTATTCTCTACTTACTCGGATAACCAGCCAGGTGTACTAATCCAAGTC 593733
Query 552447 TTTGAAGGAGAAAGA---AAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503
| |||||| || ||| ||| || || || || |||| || || | ||| | |
Sbjct 593732 TATGAAGGCGAGAGAGCCAAA---ACCAAGGACAACAATCTGCTCGGCAAGTTTGAGCTT 593676
Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563
|| ||||||||||| || | || || || || ||| | ||| ||||||||||||
Sbjct 593675 TCCGGCATTCCTCCTGCGCCCAGGGGCGTGCCTCAGATTAATGTTTGCTTCGATATCGAT 593616
Query 552564 GCCAATGGAAT 552574
|||||||| ||
Sbjct 593615 GCCAATGGCAT 593605
Score = 107 bits (118), Expect = 2e-17
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369
|| ||||| || || || |||| || || |||||| | | ||||||||| ||| |||
Sbjct 594731 AAGCAATTCTCTCCTGAGGAAATCTCCTCCATGGTTCTTACCAAAATGAAAGAAATTGCC 594672
Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429
||||| | || || || | | | |||||| | ||||| || || || || ||
Sbjct 594671 GAAGCTTTCCTCGGCAAAAGTGTAAAGAACGCAGTAGTCACTGTCCCTGCCTACTTCAAC 594612
Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGT-ATTGCTGGACTTAATGTTCTTCG 550488
||||| || || || || ||||| |||||||| ||| || | || || ||||| | |
Sbjct 594611 GACTCTCAGCGGCAGGCAACTAAGGATGCTGG-CGTCATCTCCGGCCTCAATGTCATGAG 594553
Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
|| ||||| || ||||||||||| || |||| ||||| ||||| ||
Sbjct 594552 GATCATCAACGAGCCTACTGCTGCAGCCATTGCCTATGGCCTTGACAA 594505
>seq56765
Length=334650
Score = 141 bits (156), Expect = 7e-28
Identities = 322/477 (68%), Gaps = 13/477 (3%)
Strand=Plus/Plus
Query 551890 CCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTG 551949
||| ||||||||| | | ||||| ||||| || ||||| || | |||| || ||
Sbjct 283444 CCAGAGCTCTTCGAAGGTTGAGAACAGCTTGTGAGAGAGCGAAGAGGACTCTCTCTTCCA 283503
Query 551950 GTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTA 552009
|| | || ||||| |||||| | ||||| ||||| || || ||||| | | | | |
Sbjct 283504 GTGCGCAGACCACCATTGAAATCGATTCTTTATTCGAAGGCATTGACTTCTACAGTTCGA 283563
Query 552010 TTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAG 552069
| |||| || | || ||||| | ||||||||| || || || || ||||
Sbjct 283564 TAACGAGAGCAAGGTTCGAAGAGCTCAACATTGATCTCTTCAGGAAGTGCATGGAGCCAG 283623
Query 552070 TAGAACAAGTTT-TAAGAGATTCAAAGATTGATAA---ATCCAAAGTACATGAAATTGTG 552125
| || |||| | | |||| | ||||| ||||| | ||| | | || ||||
Sbjct 283624 TGGAG-AAGTGCATGAAAGATGCCAAGATGGATAAGAGAACCATCG---ACGACGTTGTC 283679
Query 552126 CTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCA 552183
|| || ||||| ||||| |||||||| ||| ||| | || | ||| | | ||||
Sbjct 283680 CTGGTGGGTGGTTCTACTAGAATTCCCAAAGTTCAGCAGCTGCTTCAAGATTTC--TTCA 283737
Query 552184 ATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAA 552243
|||| || | | | |||| | || || || |||||||| ||||||||||| ||
Sbjct 283738 ATGGAAAGGAGCTCTGTAAAAGCATAAACCCTGACGAGGCTGTGGCCTATGGTGCTGCTG 283797
Query 552244 TTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAG 552303
|||||||||| || | || | |||| ||| ||||| | || | ||| | |
Sbjct 283798 TTCAAGCAGCAATCTTGAGCGGTGATGGCAATGAGAAAGTACAAGACATGCTTCTTATTG 283857
Query 552304 ATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360
||||| ||||||| || |||||||| ||||||| |||||| | ||||| | |||||
Sbjct 283858 ATGTTGCTCCTCTCTCCCTTGGTTTGGAAACAGCTGGAGGCGTCATGAC-AGTCTTA 283913
>seq41242
Length=195047
Score = 131 bits (144), Expect = 1e-24
Identities = 163/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| ||||| || |||||| ||| || ||||||||| || || ||||| |
Sbjct 146677 GAGACGGAGGACAAGGTGGAGGGTAGATTCCTTTTGAATATTGTAGTCTGCAAGAGTGCG 146736
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| ||||| |||||||| ||||| ||||| || |||||||| |||||||| || ||
Sbjct 146737 GCCATCCTCAAGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTC 146796
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAG 563434
||| || || || ||| || || ||||||||||| | | | || ||| | ||
Sbjct 146797 TTTGTCCTGGATCTTTGCCTTCACGTTATCAATTGTATCGGAGCTCTCCAC-TTCCAAAG 146855
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| | || || || |||||||| || || ||||| ||||||
Sbjct 146856 TGATGGTCTTTCCCGTAAGAGTCTTCACAAAAATCTGCATA 146896
Score = 131 bits (144), Expect = 1e-24
Identities = 163/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| ||||| || |||||| ||| || ||||||||| || || ||||| |
Sbjct 151841 GAGACGGAGGACAAGGTGGAGGGTAGATTCCTTTTGAATATTGTAGTCTGCAAGAGTGCG 151900
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| ||||| |||||||| ||||| ||||| || |||||||| |||||||| || ||
Sbjct 151901 GCCATCCTCAAGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTC 151960
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAG 563434
||| || || || ||| || || ||||||||||| | | | || ||| | ||
Sbjct 151961 TTTGTCCTGGATCTTTGCCTTCACGTTATCAATTGTATCGGAGCTCTCCAC-TTCCAAAG 152019
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| | || || || |||||||| || || ||||| ||||||
Sbjct 152020 TGATGGTCTTTCCCGTAAGAGTCTTCACAAAAATCTGCATA 152060
Score = 98.7 bits (108), Expect = 8e-15
Identities = 156/221 (71%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
|||||||||||||||||| ||||| ||| || |||||||||||| || || || |
Sbjct 170941 GAGACGGAGTACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCTGCAAGGGTGCG 171000
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| ||||| |||||||| || || || || || |||||||| || || || || ||
Sbjct 171001 ACCATCCTCAAGCTGTTTTCCAGCGAAGATTAGCCTCTGCTGATCTGGCGGGATCCCCTC 171060
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAG 563434
|| || || || ||| || || || || || || | | | ||| ||| | |
Sbjct 171061 CTTGTCCTGGATCTTTGCCTTGACATTATCGATGGTGTCCGAGCTCTCTAC-TTCTAAGG 171119
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| | || || |||||||| || || || || |||||||||
Sbjct 171120 TGATGGTCTTTCCAGTAAGCGTCTTCACAAATATTTGCATA 171160
>seq60508
Length=503932
Score = 127 bits (140), Expect = 2e-23
Identities = 245/359 (68%), Gaps = 3/359 (1%)
Strand=Plus/Minus
Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240
||||| || || || ||||| || | ||| |||| | |||||||| ||||| |||
Sbjct 290448 GATGCCAAGCGATTGATTGGCAGGCGGTTTTCTGATGCATCTGTTCAGAGTGATATCAAG 290389
Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAA--ACCTTAT-ATTGAAGCTACTCAT 550297
| |||||| ||| || || || || ||||| | | | || |||| | | ||
Sbjct 290388 CTTTGGCCATTCAAAGTTATTCCTGGACCTGGAGACAAGCCCATGATTGTTGTTCAGTAT 290329
Query 550298 GAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATG 550357
| || | |||||| ||| || | ||| |||| |||||||||||| | || || |||
Sbjct 290328 AAGGGTGAGGATAAACAGTTTGCAGCTGAAGAAATCTCATCTATGGTTCTTATTAAGATG 290269
Query 550358 AAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCA 550417
| | ||| || | | | || || | | | ||||| | ||||| ||
Sbjct 290268 CGTGAGATTGCCGAGGCCTATTTAGGAGCGACTGTGAAGAACGCAGTTGTCACTGTTCCT 290209
Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477
||||| || ||||||||||| || ||||| || || |||||||| ||||| || ||
Sbjct 290208 GCATACTTCAATGACTCACAGCGCCAAGCCACAAAGGATGCTGGTGTCATTGCCGGTCTA 290149
Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
|||||| | | || || ||||| || ||||||||||| |||||||||| ||||| ||
Sbjct 290148 AATGTTATGAGAATCATTAATGAGCCAACTGCTGCTGCCATTGCATATGGTCTTGACAA 290090
>seq46817
Length=946993
Score = 114 bits (126), Expect = 1e-19
Identities = 131/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411
|| |||||| |||| || || | | | ||| || ||| || | || || || ||
Sbjct 753873 AAGATGAAAGAAACTGCAGAAGCCTATCTCGGTAAATCTGTTTCGAAAGCCGTGATCACA 753814
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| || || || |||||||| | || || || |||||||||||||||||| | ||||||
Sbjct 753813 GTTCCTGCTTACTTTAATGATGCGCAGCGACAGGCTACTAAAGATGCTGGAAGAATTGCT 753754
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
|| | |||||||||| ||||| ||||| || |||||||||||||| | |||||
Sbjct 753753 GGGTTAGATGTTCTTCGGATTATTAATGAGCCGACTGCTGCTGCACTGTCCTATGG 753698
>seq40947
Length=4604
Score = 113 bits (124), Expect = 4e-19
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|| || || || || |||||||| |||||| |||||||| || || || || |
Sbjct 1898 AGGCGAAGAACGAGGTGAAGGGTTGATTCTTTCTGTATATTGTAGTCCGCAAGCGTGCGG 1839
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|| ||||| || || || ||||| || || ||||||||||| || ||||| || ||
Sbjct 1838 CCGTCCTCAAGCTGCTTACCAGCAAAGATGAGCCTTTGCTGATCCGGCGGAATCCCCTCC 1779
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435
||||||||||| || || || |||||||||||| | | | || || || ||
Sbjct 1778 TTATCTTGAATCTTCGACTTCACATTCTCAATTGTATCCGAGCTCTCCAC-GTCCAGGGT 1720
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| ||||||||||||||||| ||||| ||||| |||||
Sbjct 1719 GATCGTTTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1681
>seq38797
Length=1288649
Score = 105 bits (116), Expect = 5e-17
Identities = 161/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || ||||||||||| ||| | ||| || ||||||||||| ||
Sbjct 628756 CCTCAGACGGAGAACTAGATGAAGGGTGGACTCCTTCTGG--ATGTTGTAATCAGCAAGG 628699
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | ||||||||| ||||| |||||||| || || ||||||||||| ||||| ||
Sbjct 628698 GTGCGGCCATCTTCAAGCTGTTTGCCGGCAAAGATCAGCCTTTGCTGATCTGGAGGGATG 628639
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTC 563429
|| || || || || || || ||||| ||||| ||||| | | || ||
Sbjct 628638 CCCTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCAATAGTATCCGAACTCTCCAC-CTC 628580
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || | || || || || ||||| || ||||| || |||||
Sbjct 628579 GAGGGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 628535
Score = 87.8 bits (96), Expect = 1e-11
Identities = 155/224 (69%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || ||||| ||||| ||| | ||| || ||||||||||| ||
Sbjct 628984 CCTCAGACGGAGAACCAGATGGAGGGTGGACTCCTTCTGG--ATGTTGTAATCAGCAAGG 628927
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | ||||||||| || || |||||||| || || || ||||| || || || ||
Sbjct 628926 GTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGGATA 628867
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG 563430
|| ||||| || || || || || || ||||| || |||| | | ||
Sbjct 628866 CCCTCTTTGTCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAGCTCTCAACCTCT 628807
Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | || || ||||| ||||| || ||||| || |||||
Sbjct 628806 AGGGTGATCGTCTTGCCAGTGAGAGTCTTTACGAAGATCTGCAT 628763
>seq13230
Length=937707
Score = 105 bits (116), Expect = 5e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
||||| |||||||| ||||||||||| ||||| | ||| | || || || || ||||||
Sbjct 188803 GCAGTGATAACTGTCCCAGCATATTTCAATGATGCTCAAAGGCAGGCCACAAAGGATGCT 188862
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| | |||||||| ||| |||| | | || ||||||||||| |||||||| || |||
Sbjct 188863 GGGAGAATTGCTGGCCTTGATGTGCAAAGGATAATCAATGAACCAACTGCTGCAGCTCTT 188922
Query 550520 GCATATGG 550527
| |||||
Sbjct 188923 TCTTATGG 188930
>seq58518
Length=949082
Score = 95.1 bits (104), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| || || ||| | || ||||| ||| ||||||||||| | | |||||| | ||
Sbjct 149817 ATTGGGATTGATCTTGGCACCACTTATTCATGTGTTGGTGTCTACAAGAATGGTCATGTA 149758
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
|||||||| || ||||| ||||||||| | | |||||| || | || ||||||| ||
Sbjct 149757 GAAATTATAGCAAATGACCAAGGTAACCGTATTACTCCTTCCTGGGTAGCTTTCACTGAC 149698
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
| || || ||||||| || || || | ||||| ||| ||| || | |||
Sbjct 149697 AACGAGAGGTTGATTGGTGAAGCTGCTAAGAACCAAGCAGCTGTGAATGCTGAAAGAACT 149638
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAA-GAAGT 550207
||||||||| ||| | | ||||||| |||||
Sbjct 149637 GTTTTTGATGTCAAAAGACTTATTGGAAGGAAGT 149604
>seq2942
Length=1224
Score = 95.1 bits (104), Expect = 1e-13
Identities = 236/352 (67%), Gaps = 10/352 (3%)
Strand=Plus/Minus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
|||||||||| || |||||||| | || | |||||| | || ||||| |||||
Sbjct 1047 AGAACTGCTTATGAGAGAGCCAAGAGGACTTTGTCATCTACAGCCCAGACCACCATTGAG 988
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
| ||||| | | |||||| | |||| |||| | ||| | | || | || ||
Sbjct 987 ATTGATTCTCTCTATGAGGGTGTAGATTTCTATACAACGATTACTCGAGCGAGGTTCGAG 928
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TAAGAGA 552088
|| | ||||||||||||||| || || || ||||| |||| | || ||
Sbjct 927 GAGCTAAACATGGATCTCTTTAGAAAATGCATGGAGCCTGTAGAG-AAGTGCCTTAGGGA 869
Query 552089 TTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAAT 552148
| | ||||| || || | | || ||||| |||| ||||| || ||||| || |||
Sbjct 868 TGCCAAGATGGACAAGAGCCATGTCCATGATGTTGTACTTGTCGGCGGATCAACTCGAAA 809
Query 552149 TCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206
||||| | ||| || || | ||| | | |||||||| || | | || |||
Sbjct 808 TCCTAGAGTTCAGCAACTGCTGCAAGATTTC--TTCAATGGCAAGGAGCTC--TGCAAGA 753
Query 552207 G--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256
| ||||||| |||||||||||||| | |||||| || | ||||| |||||
Sbjct 752 GCATTAATCCGGATGAGGCTGTTGCATGTGGTGCTGCCGTCCAAGCTGCTAT 701
>seq56985
Length=1052626
Score = 93.3 bits (102), Expect = 3e-13
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| ||||| ||| | || || || || ||||||||||| | | |||||| | ||
Sbjct 54706 ATTGGTATTGATCTTGGTACAACTTACTCATGTGTTGGTGTCTACAAGAATGGTCATGTC 54765
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
|||||||| || ||||| || || ||| | | ||||| || | || ||||||| ||
Sbjct 54766 GAAATTATAGCAAATGACCAGGGCAACCGCATCACTCCTTCATGGGTGGCTTTCACTGAC 54825
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
|||||| || | ||||| ||||| || | ||||| | | ||||| | |||
Sbjct 54826 ACTGAAAGGTTGATCGGTGAGGCAGCCAAGAACCAAGCTGCAGTGAATCCCGAGAGAACT 54885
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAA 550205
|||||||||| ||| | | ||||||||||
Sbjct 54886 ATTTTTGATGTCAAAAGACTTATTGGAAGAA 54916
>seq36358
Length=502239
Score = 89.7 bits (98), Expect = 4e-12
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723
||||||| || || |||||||||||||||||||||||| |||| || || | ||||| |
Sbjct 299049 TTGATTTCTCCTCGCCAAATATTGCCAAAGAAATGCATGTTGGCCACTTAAGGTCTACTA 298990
Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTC-ATCGAGTC 930782
|||||||||| || | | | || | | |||| || | | || ||| || |||
Sbjct 298989 TTATTGGAGACACTCTTTCTCGAATGTTGGAAT-TTTCGAATGTTAAGGTCTTTCGGCGA 298931
Query 930783 AATCATATTGGTGATTGGGGAACACA 930808
|| ||| ||||||||||||| || ||
Sbjct 298930 AACCATGTTGGTGATTGGGGCACTCA 298905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4025440613451980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |