Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq40021 91.5 7e-14 >seq40021 Length=871558 Score = 91.5 bits (100), Expect = 7e-14 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 |||||||| ||||| ||||| |||||||| || || | ||||| ||||| ||||| Sbjct 118247 CTACCTTTCCTTTTCCCTCCTCCTTGATCAACATAGCGAGCAGTATCATTAAAAACCCGT 118188 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182 | ||||||||||| ||| |||||| || ||||| | | |||| | || || | Sbjct 118187 AGCATTGGAACTATGCCATTTGAAACACCATTTGTCCCACGAATGTAACTCCCAGTGGCA 118128 Query 26183 CTAATATCGTGAGCATGAATA--CCGATTCCACCAGCCCATTTTGAAATAGCTGCACAAT 26240 | ||| | || | ||| | | || ||||||||||| |||| || ||||| | Sbjct 118127 CGAATGT--TGTGGATGGAGACGCCAATTCCACCAGCAGATTTGCTTATTATAGCACACT 118070 Query 26241 CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 || | ||||| | ||||| | ||||||||| ||||||| Sbjct 118069 CTTTTAAGGTATCATATATTCCCTCAATGCTATCATCTTTCAT 118027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252815175699650