Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq40021 91.5 7e-14
>seq40021
Length=871558
Score = 91.5 bits (100), Expect = 7e-14
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122
|||||||| ||||| ||||| |||||||| || || | ||||| ||||| |||||
Sbjct 118247 CTACCTTTCCTTTTCCCTCCTCCTTGATCAACATAGCGAGCAGTATCATTAAAAACCCGT 118188
Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182
| ||||||||||| ||| |||||| || ||||| | | |||| | || || |
Sbjct 118187 AGCATTGGAACTATGCCATTTGAAACACCATTTGTCCCACGAATGTAACTCCCAGTGGCA 118128
Query 26183 CTAATATCGTGAGCATGAATA--CCGATTCCACCAGCCCATTTTGAAATAGCTGCACAAT 26240
| ||| | || | ||| | | || ||||||||||| |||| || ||||| |
Sbjct 118127 CGAATGT--TGTGGATGGAGACGCCAATTCCACCAGCAGATTTGCTTATTATAGCACACT 118070
Query 26241 CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
|| | ||||| | ||||| | ||||||||| |||||||
Sbjct 118069 CTTTTAAGGTATCATATATTCCCTCAATGCTATCATCTTTCAT 118027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252815175699650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |