Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq41242 84.2 3e-11 >seq41242 Length=195047 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||||||||| || || | || || || ||| Sbjct 171387 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAAACCATCACCCTTGAGGTGGAGAGCTCT 171328 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| ||||| || || || || ||||| ||||| || || Sbjct 171327 GATACCATTGACAATGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 171268 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| ||||| | |||||| |||||||| || || | | || | |||| || || Sbjct 171267 CAAAGGTTGATATTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTGGCAGACTACAAC 171208 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGT 156031 || || ||| || |||| ||||| |||| Sbjct 171207 AT-TCAAAAGGAATCGACCCTTCACCTAGT 171179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731205063343200