Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq41242 82.4 6e-11 >seq41242 Length=195047 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||||||||| | |||||||| ||||| || | ||| |||| | Sbjct 172299 ATGCAGATCTTTGTCAAAACCCTCACCGGCAAGACCATCACACTTGAAGTGGAGAGCTCC 172240 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || ||| ||||| || || || ||| | ||| |||||| Sbjct 172239 GACACCATCGATAATGTGAAAGCTAAGATCCAGGATAAGGAGGGCATCCCCCCGGATCAG 172180 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| || || ||| ||||||| | | | || | || || |||||| Sbjct 172179 CAGAGGCTGATCTTTGCTGGAAAGCAGTTGGAGGACGGCCGCACCCTTGCCGACTACAAC 172120 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || |||||||| | ||| | ||| Sbjct 172119 ATCCAGAAGGAATCTACCCTTCACCTTGTG 172090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412474793076686