Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq72902 98.7 4e-16
seq20738 98.7 4e-16
seq49543 87.8 7e-13
>seq72902
Length=152221
Score = 98.7 bits (108), Expect = 4e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 36924 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 36983
Query 50170 CTGCTCTACTCCGC 50183
||||||||||||||
Sbjct 36984 CTGCTCTACTCCGC 36997
>seq20738
Length=132935
Score = 98.7 bits (108), Expect = 4e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 118906 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 118847
Query 50170 CTGCTCTACTCCGC 50183
||||||||||||||
Sbjct 118846 CTGCTCTACTCCGC 118833
>seq49543
Length=241926
Score = 87.8 bits (96), Expect = 7e-13
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
|||| |||| ||||||||||||| | |||| ||| ||||||||| | |||||||| ||
Sbjct 65298 GTTGAGGAGATAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGTGAGCTACCAAA 65239
Query 50170 CTGCTCTACTCCGCATTA 50187
||||||||||||||| ||
Sbjct 65238 CTGCTCTACTCCGCACTA 65221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181445984066724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |