Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq13232 86.0 8e-12
>seq13232
Length=903684
Score = 86.0 bits (94), Expect = 8e-12
Identities = 132/186 (71%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTT-CAGGAATGGCCCAAAAAGGAACTTGTGG 193498
||||| ||| | || || ||||||||| || |||| |||||| |||| || ||| ||
Sbjct 844837 CGTATTCCTCAGATTGGAGATAAATTTAGTAGCAGGCATGGCC-AAAAGGGGACTGTGGG 844779
Query 193499 TATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTAT 193558
||||| ||| | || ||||||||||||| || | | ||| || || || |||||
Sbjct 844778 TATGACTTACACTCAGGAAGATATGCCATGGACTGTTGAAGGCATTACGCCTGACATTAT 844719
Query 193559 TATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTGCCACTGTTAT 193618
| | ||||| || ||||| || ||||||| ||| ||| |||||| | ||||
Sbjct 844718 TGTGAATCCTCATGCCATTCCCTCTCGAATGACTATTGGTCAGCTTATTGAGTGTATTAT 844659
Query 193619 GGGCAA 193624
||| ||
Sbjct 844658 GGGAAA 844653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634598778532560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |