Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq72902 581 9e-162
seq40833 475 1e-129
seq52089 464 2e-126
seq42667 253 6e-63
seq23143 188 2e-43
seq30002 181 3e-41
seq25588 174 4e-39
seq6128 159 1e-34
seq26450 111 4e-20
seq13264 96.9 1e-15
seq40448 91.5 4e-14
seq49586 80.6 8e-11
>seq72902
Length=152221
Score = 581 bits (644), Expect = 9e-162
Identities = 727/986 (74%), Gaps = 18/986 (2%)
Strand=Plus/Minus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | |||||||| || ||||||||||| || || |||||||| ||||||| |
Sbjct 1102 ACTGGATTACCAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCC 1043
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | | | | || ||| | ||| || || ||||||||||||||||| ||||| ||
Sbjct 1042 CTACTTTATTGACCGCAACT-TCTGTATTTATCATTGCCTTCATTGCTGCCCCTCCAGTC 984
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATA 18909
|| |||||||| || || || |||||| | || ||| |||||||||||||| || ||
Sbjct 983 GATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATT 924
Query 18910 TCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGG 18967
|| || ||| | |||| | | ||| || || || | || || |||||||| ||||
Sbjct 923 TCAGGTGCCATTATTCCTACTTCCGCA--GCTATAGGTTTGCATTTTTACCCAATATGGG 866
Query 18968 AAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCC 19027
|||| || ||||||| ||| | ||||| || || || | |||| | || | |
Sbjct 865 AAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTGATTGTTCTAC 806
Query 19028 ACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAG 19087
||||| | |||| || | ||||||||| || |||||||||||||| | || || |
Sbjct 805 ACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGG 746
Query 19088 GGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCT 19147
| ||||||||||||||| |||||| || |||||||||||||| || || | || || |
Sbjct 745 GTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGCTGTTT 686
Query 19148 TCCTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGTATTA 19204
|| | |||| || |||||||||| || || | || | ||||||||| || ||
Sbjct 685 TCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGAATAT 629
Query 19205 GTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGT 19264
|||||| ||||||| |||| ||||||||||||| || || ||||| || ||||| || |
Sbjct 628 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATCCAT 569
Query 19265 TCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTT 19324
| |||||| | || || |||||||| |||||||| || ||||| ||||| ||||| ||||
Sbjct 568 TTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCTCTATTCAGTGCTATGCATGGTT 509
Query 19325 CGCTTGTTACGTCCTCGCTT-GTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGC 19383
| ||| || | || | || | | ||||| |||||| | | ||| || | ||
Sbjct 508 C-TTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAACGAGTCTGCTAATGAAGGT 450
Query 19384 TACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGT 19443
|||| || || ||||| ||||| || ||||| ||||| || |||||||| ||||||||
Sbjct 449 TACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGC 390
Query 19444 CGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCT 19503
|| | || ||||| || || ||||||||| |||||| |||||||||| |||||
Sbjct 389 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTACATTTCTTCCTGGCT 330
Query 19504 GCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA--AGCACCATGGCATTCA 19561
|||||||| || || || || ||||| | | ||| ||||| ||||| ||||| ||||
Sbjct 329 GCTTGGCCAGTAGTGGGTATCTGGTTCACTG--CTTTGGGTATTAGCACTATGGCGTTCA 272
Query 19562 ACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATA 19621
|| ||||||| || || |||||||| || | |||||| | |||||||| ||| | |
Sbjct 271 ACCTGAATGGTTTCAATTTTAACCAATCTGTAGTTGACAGTCAAGGTCGTGTTATTAACA 212
Query 19622 CTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATG 19681
|||||||||| || | ||||||||||| || || | || || ||||| ||||||||||
Sbjct 211 CTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTCATGCATGAACGTAATG 152
Query 19682 CTCATAACTTCCCACTTGATTTGGCT 19707
| || |||||||| || ||| | |||
Sbjct 151 CACACAACTTCCCTCTAGATCTAGCT 126
>seq40833
Length=287482
Score = 475 bits (526), Expect = 1e-129
Identities = 701/985 (71%), Gaps = 16/985 (2%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | |||||||| || |||| || ||| || || |||||||| ||||||| |
Sbjct 9484 ACTGGATTACCAGTACTGAAAACCATCATTACATTGGATGGTTTGGTGTTTTGATGATCC 9543
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | | | | || ||| | ||| || || ||||||||||||||||| ||||| ||
Sbjct 9544 CTACTTTATTGACCGCAACT-TCTGTATTTATCATTGCCTTCATTGCTGCCCCTCCAGTC 9602
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATA 18909
|| |||||||| || || | |||||| | || ||| |||||||||||||| || ||
Sbjct 9603 GATATTGATGGTATTCGTTAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATT 9662
Query 18910 TCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGG 18967
|| || ||| | |||| | | ||| || || || || || |||||||| ||||
Sbjct 9663 TCAGGTGCCATTATTCCTACTTCCGCA--GCTATAGGTTGGCATTTTTACCCAATATGGG 9720
Query 18968 AAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCC 19027
|||| || ||||||| ||| | ||||| || || || | |||| | || | |
Sbjct 9721 AAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTGATTGTTCTAC 9780
Query 19028 ACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAG 19087
||||| | |||| || | ||||||||| || ||||||||||||| | || || |
Sbjct 9781 ACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTAAGTGGGAACTTAGTTTCCGTCTGG 9840
Query 19088 GGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCT 19147
| |||| |||||||||| |||||| || |||||| ||||||| || || | || || |
Sbjct 9841 GTATGCACCCTTGGATTGCTGTTGCATATTCAGCTGCTGTTGCGGCTGCTACAGCTGTTT 9900
Query 19148 TCCTTGTCTATCCATTTGGTCAAG---GTTCCTTTAGCGACGCTATGCCTTTGGGTATTA 19204
|| | |||| || ||||||||| ||| || | || | ||||||||| ||
Sbjct 9901 TCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGACAAT 9957
Query 19205 GTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGT 19264
|||||| || |||| |||| |||||||||| || || || ||||| || ||||| || |
Sbjct 9958 CTGGTACTTTAAACTTCATGATTGTATTCCAAGCAGAGCACAACATTCTTATGCATCCAT 10017
Query 19265 TCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTT 19324
| |||||| | || || |||| ||| ||| |||| || ||||| ||||| ||||| |||
Sbjct 10018 TTCACATGTTAGGCGTAGCTGTTGTATTCAGCGGCTCTCTATTCAGTGCTATGCATAGTT 10077
Query 19325 CGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCT 19384
| | || || || | | | ||||| |||||| | | ||| || | || |
Sbjct 10078 CTTTGGTAACTTCTAATTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTT 10137
Query 19385 ACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTC 19444
||| || || ||||| ||||| || ||||| ||| | || ||||||| |||||||| |
Sbjct 10138 ACAGATTCGGTCAAGAGGAAGAAACCTATAATATTATAGCCACTCATGGTTATTTTGGCC 10197
Query 19445 GGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTG 19504
| | || ||||| || || ||||||||| || ||| |||||||||| ||||||
Sbjct 10198 GATTGATCTTCCAATATGCTAATTTCAACAATTCCCATTCCTTACATTTCTTCCTGGCTG 10257
Query 19505 CTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA--AGCACCATGGCATTCAA 19562
|||||| | || || || ||||| || ||| ||||| ||||| ||||| |||||
Sbjct 10258 CTTGGCTATTAGTGGGTATCTGGTT--CCCTGCTTTGGGTATTAGCACTATGGCGTTCAA 10315
Query 19563 CTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATAC 19622
| ||||||| || || ||||| || || | |||||| | |||||||| ||| | ||
Sbjct 10316 CCTGAATGGTTTCAATTTTAAACAATCTGTAATTGACAGTCAAGGTCGTGTTATTAACAC 10375
Query 19623 TTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGC 19682
|| |||||| || | |||| |||||| || || | || || ||||| ||| |||||||
Sbjct 10376 TTTGGCTGATATCATAAATCATGCTAATCTTGGTATGGAAGTCATGCATGAATGTAATGC 10435
Query 19683 TCATAACTTCCCACTTGATTTGGCT 19707
|| |||||||| || ||| | |||
Sbjct 10436 ACACAACTTCCCTCTAGATCTAGCT 10460
>seq52089
Length=184372
Score = 464 bits (514), Expect = 2e-126
Identities = 697/983 (71%), Gaps = 13/983 (1%)
Strand=Plus/Minus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | ||||||| || ||| ||||||| || || |||||||| ||||||| |
Sbjct 43204 ACTGGATTACCAGTATTGAAAACAGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCC 43145
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | | | | || ||| | ||| || || |||||| ||||||| || |||| ||
Sbjct 43144 CTACTTTATTGACCGCAACT-TCTGTATTTATCATTGCCATCATTGCGGCCTCTCCAGTT 43086
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATA 18909
|| |||||||| || | || ||| || | || ||| |||||||||| || || ||
Sbjct 43085 GATATTGATGGTATTCATGAACCTATTTCTGGATCTCTACTTTATGGAAT-AATATTATC 43027
Query 18910 TCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAA 18969
|| || ||| | |||| | | || || || | || || |||||||| ||||||
Sbjct 43026 TCAGGTGCCTTTATTCCTACTTTCGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAA 42967
Query 18970 GCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCAC 19029
|| || ||||||| ||| | ||||| || || || | |||| | || | |||
Sbjct 42966 GCAGTATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTGATTGTTCTACAC 42907
Query 19030 TTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGG 19089
||| | |||| || | ||||||||| || |||||||||||||| | | || ||
Sbjct 42906 TTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCGGTCTGGGT 42847
Query 19090 ATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTC 19149
|||||||||| |||| ||||| || |||||||||||||| || || | | || |||
Sbjct 42846 ATGCGCCCTTAGATTGCTGTTGAATATTCAGCTCCTGTTGCGGCTGCTACAACTGTTTTC 42787
Query 19150 CTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206
| |||| || |||||||||| || || || | | ||||||||| || || |
Sbjct 42786 TTAATCTACCCTATTGGTCAAGGAAGTTTCTCTA---ATGGTATGCCTTTAGGAATATAT 42730
Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266
||||| ||||||| |||| ||||||||||||| || || || || || ||||| | ||
Sbjct 42729 GGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAATATTCTTATGCATCTATTT 42670
Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326
|||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| | ||
Sbjct 42669 CACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCTCTATTCAGTGCTATGCATGATTAT 42610
Query 19327 CTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTAC 19386
| || || || | | | ||||| |||||| | | || || | || |||
Sbjct 42609 TTAGTAACTTCTAGGTAAATTAGGGAAACCACTGAAAATGAGTCCTCTAATGAAGGTTAC 42550
Query 19387 AAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGG 19446
| || || ||||| ||||| |||||||| ||| | || |||||||| |||||||| ||
Sbjct 42549 ATATTCGGTCAAGAGGAAGAAACTTATAATATTATAGCCGCTCATGGTTATTTTGGCCGA 42490
Query 19447 CTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCT 19506
| || ||||| || || ||||||||| |||| |||||||||| ||||||||
Sbjct 42489 TTGATCTTCCAATATGCTAGTTTCAACAATTCATGTTCCTTACATTTCTTCCTGGCTGCT 42430
Query 19507 TGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA--AGCACCATGGCATTCAACT 19564
||||| || || || || | ||| | | || ||||| ||||| ||||| ||||||
Sbjct 42429 TGGCCAGTAGTGGGTATCTAGTTCACTAC--TTTGGGTATTAGCACTATGGCGTTCAACC 42372
Query 19565 TGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTT 19624
||||||| || || |||||||| | |||||| | |||||||| | | | ||||
Sbjct 42371 TGAATGGTTTCAATTTTAACCAATATGCAGTTGACAGTCAAGGTCGTGTTACTAACACTT 42312
Query 19625 GGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTC 19684
||||| | || | ||||||||||| || || | || || ||||| ||||||||||| |
Sbjct 42311 GGGCTAATATCTTAAATCGTGCTAATCTTGGTATGGAAGTCATGCATGAACGTAATGCAC 42252
Query 19685 ATAACTTCCCACTTGATTTGGCT 19707
|||||||||| || ||| | |||
Sbjct 42251 ATAACTTCCCTCTAGATCTAGCT 42229
>seq42667
Length=3872
Score = 253 bits (280), Expect = 6e-63
Identities = 419/599 (70%), Gaps = 23/599 (4%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | |||||||| | ||||||||||| || || |||||||| ||||||| |
Sbjct 1138 ACTGGATTACCAGTACTTAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCC 1197
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | | | | || ||| ||||| || |||||||||||||||||||| ||||| ||
Sbjct 1198 CTACTTTATTGACCGCAACT-TTTGTATTTATTATTGCCTTCATTGCTGCCCCTCCAGTC 1256
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATA 18909
|| ||| |||| || || || | |||| | || ||| ||||| ||||| || ||
Sbjct 1257 GATATTAATGGTATTCGTGAACATGTTTCTGGGTCTCTACTTTA----AACAATATTATC 1312
Query 18910 TCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAA 18969
|| || ||| | |||| | | || || || | || || |||||| | |
Sbjct 1313 TCAGGTGCCATTATTCCTACTTCCGTAGCTATAGGTTTGCATTTTTACCCA------GCA 1366
Query 18970 GCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCAC 19029
|| || ||||||| ||| | ||||| || || || | |||| | || | |||
Sbjct 1367 GCATATG---TTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTGATTGTTCTACAC 1423
Query 19030 TTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGG 19089
||| | |||| | | ||||||||| || |||||||||||||| | || || ||
Sbjct 1424 TTCTTACTTGGTTTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 1483
Query 19090 ATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTC 19149
|||||||||| |||| |||||| || | |||||||||||| || || | | || |||
Sbjct 1484 ATGCGCCCTTAGATTACTGTTGCATATTAAGCTCCTGTTGCGGCTGCTACATCTGTTTTC 1543
Query 19150 CTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206
| |||| || |||||||||| || || | || | | |||||| || || |
Sbjct 1544 TTGATCTACCCTATTGGTCAAGGAAGTTTCTCT---GATGGT--GCCTTTAGGAATATCT 1598
Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266
|||| ||||||| ||| ||||||||||||| | | ||||| || ||||| || ||
Sbjct 1599 GGTATTTTCAACTTAATGATTGTATTCCAGGCAAAGAACAACATTCTTATGCATCCATTT 1658
Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTC 19325
|||||| | || || |||||||| |||||||| || ||||| || || ||||| |||||
Sbjct 1659 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCTCTATTCAGAGCTATGCATGGTTC 1717
>seq23143
Length=288542
Score = 188 bits (208), Expect = 2e-43
Identities = 407/601 (68%), Gaps = 26/601 (4%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | ||| |||| | | ||||||||| || || |||||| | ||||||| |
Sbjct 209685 ACTGGATTACCCGTACTTAAAGCCGTCTTTACATTGGATGGTTTCGTGTTTTGATGATCC 209744
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGTT-TCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | | | | || ||| | ||| | || ||||||||||||||||| ||||| ||
Sbjct 209745 CTACTTTATTGACCGCGACT-TCTGTAGTTATCATTGCCTTCATTGCTGCCCCTCCAGTC 209803
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTT--CTTTATGGAAACAACATCA 18907
| |||||||| || || || | |||| || ||||| ||||| ||||| || |
Sbjct 209804 CATATTGATGGTATTCGTGAACTTGTTTATGG--GTCTTTACTTTA----AACAATATTA 209857
Query 18908 TATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGG 18967
| || ||| | ||| | | || || || | || || ||| | |
Sbjct 209858 TCTCATATGCCATTATTCGTACTTCCGCGGCTATAGGTTT-CATTTTTACATA------G 209910
Query 18968 AAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCC 19027
||| || ||||||| ||| | ||||| || || || | |||| | || | |
Sbjct 209911 CAGCA---TCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTGATTGTTCTAC 209967
Query 19028 ACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAG 19087
||||| | |||| || | ||||||||| | |||||||||||||| | || || |
Sbjct 209968 ACTTCTTACTTGGTGTAGCTTGTTACATGGGTCATGAGTGGGAACTTAGTTTCCGTCTGG 210027
Query 19088 GGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCT 19147
| ||||||||||||||| | || | || | ||||||| |||| | || | | || |
Sbjct 210028 GTATGCGCCCTTGGATTGTTATTTCATATTAAGCTCCTATTGCGACTGCTACAGTTGTTT 210087
Query 19148 TCCTTGTCTATCCATTTGGTCAAG---GTTCCTTTAGCGACGCTATGCCTTTGGGTATTA 19204
|| | | || | ||||||||| ||| || | || | ||||||||| || ||
Sbjct 210088 TCTTGATTTACCTTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGAATAT 210144
Query 19205 GTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGT 19264
||||| ||||||| |||| |||||||| |||| | || ||||| || ||||| || |
Sbjct 210145 CGGGTACTTTCAACTTCATGATTGTATTCTAGGCATAGCACAACATTCTTATGCATCCAT 210204
Query 19265 TCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTT 19324
| |||||| | || || |||||||| |||||||| || ||||| ||||| ||||| |||
Sbjct 210205 TTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCTCTATTCAGTGCTATGCATTGTT 210264
Query 19325 C 19325
|
Sbjct 210265 C 210265
>seq30002
Length=20408
Score = 181 bits (200), Expect = 3e-41
Identities = 188/245 (77%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 19084 CTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCG 19143
||| | ||||||| ||||||| |||||| || |||||||||||||| || || | ||
Sbjct 12215 CTATGTATGCGCCTTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGCT 12156
Query 19144 GTCTTCCTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGT 19200
|| || | |||| || |||||||||| || || | || | ||||||||| ||
Sbjct 12155 GTTTTTTTGATCTACCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGA 12099
Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260
|| |||||| ||||||| |||| ||||||||||||| || || ||||| || |||||
Sbjct 12098 ATATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCAT 12039
Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320
|| || |||||| | || || |||||||| |||||||| || ||||| ||||| |||||
Sbjct 12038 CCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCTCTATTCAGTGCTATGCAT 11979
Query 19321 GGTTC 19325
|||||
Sbjct 11978 GGTTC 11974
>seq25588
Length=209542
Score = 174 bits (192), Expect = 4e-39
Identities = 227/312 (73%), Gaps = 4/312 (1%)
Strand=Plus/Plus
Query 19383 CTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGG 19442
||||| || || ||||| ||||| || ||||| ||||| || |||||||| |||||||
Sbjct 143823 CTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGA 143882
Query 19443 TCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGC 19502
|| | || || || || || ||||||||| || ||| |||||||||| ||||
Sbjct 143883 CCGATTGATCTTTCAATATGCTAGTTTCAACAATTCCCATTCCTTACATTTCTTCCTGGC 143942
Query 19503 TGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA--AGCACCATGGCATTC 19560
||||||||| || || || || | || | | ||| ||||| ||||| ||| |||
Sbjct 143943 TGCTTGGCCAGTTGTAGGTATCCGATTCACTG--CTTTGGGTATTAGCACTTTGGAGTTC 144000
Query 19561 AACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGAT 19620
||| ||||||| || || |||||||| | | ||||| | | |||||| ||| |
Sbjct 144001 AACCTGAATGGTTTCAATTTTAACCAATATGTAGTTGACTGTCAAGTTCGTGTTATTAAC 144060
Query 19621 ACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAAT 19680
||||||| ||| || | ||||||||||| || || | || || ||||| |||||||||
Sbjct 144061 ACTTGGGGTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTCATGCATGAACGTAAT 144120
Query 19681 GCTCATAACTTC 19692
|| | ||||||
Sbjct 144121 GCATACAACTTC 144132
>seq6128
Length=59994
Score = 159 bits (176), Expect = 1e-34
Identities = 385/578 (67%), Gaps = 20/578 (3%)
Strand=Plus/Plus
Query 18739 ACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTC 18798
||||||| | || ||||||||||| || |||||||| | ||| ||| | ||
Sbjct 39663 ACCAGTATTAAAAATCGTCTTTATATTGGATGGTTTGGTG---TTTTGAATCCCTACTTC 39719
Query 18799 CTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTG 18856
|| | | ||| ||||| || || ||| |||| |||| | | |||| || || ||||
Sbjct 39720 ATTAACCACAACTTTTTGTATTTATCATTACCTTTATTGTTTCCACTCCAGTTGATATTG 39779
Query 18857 ATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAG 18916
|||| || | || ||| || || ||| ||||||||||| || || || || || |
Sbjct 39780 ATGGTATTCATGAACCTATTTATGGGTCTCTACTTTATGGAAATAATATTATCTCAGGTG 39839
Query 18917 CCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATT 18976
| | |||| | || | || || || |||||||||| ||| ||
Sbjct 39840 TCATTATTCCTACTTCCACAGGTATAGGTTCGCATTTCTACCCAAC------AGCATATG 39893
Query 18977 CACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCA 19036
||||||| ||| | || || | || || | |||| | || | |||||| |
Sbjct 39894 ---TTGATGACTGGTTATATAATTGCGGTCCTTATGAACTGATTGTTCTACACTTCTTAC 39950
Query 19037 TTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCC 19096
|||| || | |||| |||| | |||||||||||||| | | || || |||| |
Sbjct 39951 TTGGTGTAGCTTATTACTTGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTATGCTCT 40010
Query 19097 CTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCT 19156
|||||||| || ||| || | ||||||| |||| || || || | ||| | |||
Sbjct 40011 CTTGGATTGCTGCTGCATATTAAGCTCCTATTGCAGCTGCTATAGCAATTTTCTTGATCT 40070
Query 19157 ATCCATTTGGTCA---AGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGT 19213
| || ||||||| | ||| |||| || | ||||||||| || || | ||| |
Sbjct 40071 ACCCTATTGGTCAAAGAAGTTTCTTT---GATGGTATGCCTTTAGGAATATCTATTACTT 40127
Query 19214 TCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGC 19273
|||||| | | |||||||||||| || || || || || ||| | || || |||||
Sbjct 40128 TCAACTTTAGGATTGTATTCCAGGAAGAGCACAATATTCTTATGAATCCATTTCACATAT 40187
Query 19274 TCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGT 19311
| || | |||||||| |||||||| || |||||||||
Sbjct 40188 TAGGCATAGCTGGTGTATTCGGCGGCTCTCTATTTAGT 40225
>seq26450
Length=1729507
Score = 111 bits (122), Expect = 4e-20
Identities = 129/172 (75%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 19538 TTGGGGTA--AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCT 19595
|| ||||| ||||| ||||| |||||| ||||||| || || |||||||| || | |
Sbjct 1004376 TTTGGGTACTAGCACTATGGCGTTCAACATGAATGGTTTCAATTTTAACCAATCTGTAGT 1004435
Query 19596 TGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGG 19655
||| | | |||||||| ||| | |||| | |||| || | ||||||||||| || ||
Sbjct 1004436 TGATAGTCAAGGTCGTGTTATTAACACTTAGACTGATATCATAAATCGTGCTAATCTTGG 1004495
Query 19656 CTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707
| || || ||||| |||||||||| || |||||||| || ||| | |||
Sbjct 1004496 TATGGAAGTCATGCATGAACGTAATG--CACAACTTCCCTCTAGATCTAGCT 1004545
>seq13264
Length=684448
Score = 96.9 bits (106), Expect = 1e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | |||||||| || ||||||||||| || || |||||||| ||||||| |
Sbjct 272701 ACTGGATTACCAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCC 272760
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | | | | | ||| | ||| || || ||||||||||||| ||| ||||| ||
Sbjct 272761 CTACTTTATTGACCGTAACT-TATGTCTTTATCATTGCCTTCATTGATGCCCCTCCAGTC 272819
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATA 18909
|| |||||||| || | || |||||| | | ||| || ||||||||||| || ||
Sbjct 272820 GATATTGATGGTATTCATGAACCTGTTTCTAGATCTCTACTATATGGAAACAATATTATC 272879
Query 18910 TC 18911
||
Sbjct 272880 TC 272881
>seq40448
Length=2261
Score = 91.5 bits (100), Expect = 4e-14
Identities = 128/178 (72%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA--AGCACCATGGC 19556
|||||||||| || || || || || |||| || || ||||| || || ||| |
Sbjct 479 TGGCTGCTTGTCCAGTAGTGGGTATCCGGTTCATTGC--TTTGGGTATTAGAACTATGAC 536
Query 19557 ATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCAT 19616
|||||| ||||||| || || |||||||| | | |||| | | |||||||| ||
Sbjct 537 GTTCAACCTGAATGGTTTCAATTTTAACCAATATGTAGTTGATAGTCAAGGTCGTGTTAT 596
Query 19617 TGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAA 19674
| | ||||||||||| ||| | ||| ||||||| || | | || |||||||| |||
Sbjct 597 TAACACTTGGGCTGATATTATAAATAGTGCTAATCTTGATATGGAAGTAATGCATGAA 654
>seq49586
Length=154295
Score = 80.6 bits (88), Expect = 8e-11
Identities = 80/102 (78%), Gaps = 4/102 (4%)
Strand=Plus/Plus
Query 19487 TACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA- 19545
|| ||||||| ||||||||||||| || || || || ||||| | | ||| |||||
Sbjct 136777 TATATTTCTTCCTGGCTGCTTGGCCAGTAGTGGGTATCTGGTTCACTG--CTTTGGGTAT 136834
Query 19546 -AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCA 19586
||||| ||||| |||||| ||||||| || || ||||||||
Sbjct 136835 TAGCACTATGGCGTTCAACCTGAATGGTTTCAATTTTAACCA 136876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141026605895916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |