Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq41242 183 3e-41 seq40947 170 2e-37 seq25488 167 3e-36 seq38797 159 4e-34 seq55201 100 3e-16 seq14985 89.7 6e-13 seq33713 84.2 2e-11 seq15058 84.2 2e-11 >seq41242 Length=195047 Score = 183 bits (202), Expect = 3e-41 Identities = 179/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| |||||||||||||| || || |||||||||||| || | Sbjct 147123 ATGCAGATCTTTGTTAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTTGAG--AGTT 147066 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| || ||||||||||||| ||||| |||||||| ||||| ||||||| Sbjct 147065 CCGACACGATTGATAACGTGAAGGCTAAAATACAGGATAAGGAGGGCATTCCCCCAGACC 147006 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| || ||||| || ||||||| || ||||| || ||||| | Sbjct 147005 AGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCGGACTACA 146946 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || || || || ||||| || || | |||||||| ||||| Sbjct 146945 ACATTCAGAAAGAGTCAACCCTTCACCTGGTGCTCCGTCTTCGTGGTGG 146897 Score = 183 bits (202), Expect = 3e-41 Identities = 179/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| |||||||||||||| || || |||||||||||| || | Sbjct 152287 ATGCAGATCTTTGTTAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTTGAG--AGTT 152230 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| || ||||||||||||| ||||| |||||||| ||||| ||||||| Sbjct 152229 CCGACACGATTGATAACGTGAAGGCTAAAATACAGGATAAGGAGGGCATTCCCCCAGACC 152170 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| || ||||| || ||||||| || ||||| || ||||| | Sbjct 152169 AGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCGGACTACA 152110 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || || || || ||||| || || | |||||||| ||||| Sbjct 152109 ACATTCAGAAAGAGTCAACCCTTCACCTGGTGCTCCGTCTTCGTGGTGG 152061 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || || || || || |||||||| ||| | Sbjct 171387 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAAACCATCACCCTTGAGGTGGAGAGCTCT 171328 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| ||||||| ||||| |||||||||||||| || ||||| |||||| Sbjct 171327 GATACCATTGACAATGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 171268 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||| || ||||| || ||||| | |||||||| |||||||| || Sbjct 171267 CAAAGGTTGATATTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTGGCAGACTACAAC 171208 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || ||||| ||||| | | ||||| ||||| Sbjct 171207 ATTCAAAAGGAATCGACCCTTCACCTAGTACTTAGACTTCGTGGTGG 171161 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| || ||||| || || |||||||| ||| | Sbjct 171843 ATGCAGATTTTTGTCAAGACCCTTACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 171784 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || |||||||||| || ||||| |||||||||||||| || |||||| Sbjct 171783 GATACCATCGACAACGTGAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCGGACCAG 171724 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || ||||| ||||| |||||||||| || || || ||||||||||| Sbjct 171723 CAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTGCAGACTATAAC 171664 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||| || ||||| || | || ||| | || || Sbjct 171663 ATCCAAAAGGAGTCCACCCTCCATCTTGTTCTCCGCCTTAGGGGAGG 171617 Score = 178 bits (196), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || || ||||| || || |||||||| ||| || | Sbjct 171615 ATGCAGATATTTGTCAAGACCCTCACTGGAAAGACAATCACCCTTGAGGTGGAG--AGCT 171558 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | |||||||| || |||||||||||||| || || || |||| Sbjct 171557 CGGACACCATCGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGCATCCCCCCGGACC 171498 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || || |||||||| ||||| |||||||||| || ||||| || ||||||| Sbjct 171497 AGCAAAGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTATA 171438 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | |||||||||||||| || ||||| || | |||||| | ||||| Sbjct 171437 ACATTCAAAAGGAATCCACCCTCCATCTTGTGCTTCGTCTTAGGGGTGG 171389 Score = 165 bits (182), Expect = 9e-36 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||| || ||| | || || ||| || | Sbjct 146895 ATGCAGATTTTTGTGAAGACTCTTACGGGAAAGACCATCACTTTGGAAGTGGAG--AGCT 146838 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| || ||||||| || || |||||||| ||||| ||||||||||| | Sbjct 146837 CCGATACAATTGATAACGTGAAGGCAAAGATCCAGGACAAAGAGGGCATTCCTCCAGATC 146778 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || |||||||| || || || ||||||| || || || |||||||| | Sbjct 146777 AGCAGAGGCTTATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCACTCTTGCAGACTACA 146718 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | ||||||||||| || || || || ||| | ||||| || ||||| Sbjct 146717 ATATTCAAAAGGAATCTACCCTCCACCTTGTCCTCCGTCTCCGTGGTGG 146669 Score = 165 bits (182), Expect = 9e-36 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||| || ||| | || || ||| || | Sbjct 152059 ATGCAGATTTTTGTGAAGACTCTTACGGGAAAGACCATCACTTTGGAAGTGGAG--AGCT 152002 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| || ||||||| || || |||||||| ||||| ||||||||||| | Sbjct 152001 CCGATACAATTGATAACGTGAAGGCAAAGATCCAGGACAAAGAGGGCATTCCTCCAGATC 151942 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || |||||||| || || || ||||||| || || || |||||||| | Sbjct 151941 AGCAGAGGCTTATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCACTCTTGCAGACTACA 151882 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | ||||||||||| || || || || ||| | ||||| || ||||| Sbjct 151881 ATATTCAAAAGGAATCTACCCTCCACCTTGTCCTCCGTCTCCGTGGTGG 151833 Score = 165 bits (182), Expect = 9e-36 Identities = 177/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||||||||| || ||||| || || | || || ||| || | Sbjct 171159 ATGCAAATATTTGTGAAGACGCTTACTGGAAAGACCATCACCTTAGAAGTAGAG--AGCT 171102 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||||| || || |||||||||||||| || || ||||| | Sbjct 171101 CGGACACCATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGGATCCCGCCAGATC 171042 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | ||||| || ||||| || || || ||||||| ||| ||||| ||||| || | Sbjct 171041 AGCAGAGGCTAATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACCCTTGCAGATTACA 170982 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 || | || ||||||||||| || ||||| || | ||||| || ||||| || Sbjct 170981 ATATTCAGAAGGAATCCACCCTCCATCTTGTACTCCGTCTCCGTGGTGGGCA 170930 Score = 161 bits (178), Expect = 1e-34 Identities = 169/220 (77%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| || || |||||||||||| || | Sbjct 147351 ATGCAGATCTTCGTGAAAACCCTCACTGGGAAGACGATCACCCTTGAGGTTGAG--AGTT 147294 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| || ||||||| || || ||||| |||||||| ||||| ||||||| Sbjct 147293 CCGACACCATTGATAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCAGACC 147234 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || |||||||| ||||| |||||||||| ||||| || || || |||| Sbjct 147233 AGCAGAGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTATA 147174 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||| ||||| || || || || | ||||| Sbjct 147173 ACATCCAGAAGGAGTCCACACTCCACCTTGTTCTTCGTCT 147134 Score = 161 bits (178), Expect = 1e-34 Identities = 169/220 (77%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| || || |||||||||||| || | Sbjct 152515 ATGCAGATCTTCGTGAAAACCCTCACTGGGAAGACGATCACCCTTGAGGTTGAG--AGTT 152458 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| || ||||||| || || ||||| |||||||| ||||| ||||||| Sbjct 152457 CCGACACCATTGATAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCAGACC 152398 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || |||||||| ||||| |||||||||| ||||| || || || |||| Sbjct 152397 AGCAGAGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTATA 152338 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||| ||||| || || || || | ||||| Sbjct 152337 ACATCCAGAAGGAGTCCACACTCCACCTTGTTCTTCGTCT 152298 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || ||||||||||| || || ||||| || ||| || | Sbjct 172299 ATGCAGATCTTTGTCAAAACCCTCACCGGCAAGACCATCACACTTGAAGTGGAG--AGCT 172242 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| |||| ||||| || ||||| |||||||| || || || || | Sbjct 172241 CCGACACCATCGATAATGTGAAAGCTAAGATCCAGGATAAGGAGGGCATCCCCCCGGATC 172182 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || |||||||| ||||| | ||||| | || ||||| || ||||| | Sbjct 172181 AGCAGAGGCTGATCTTTGCTGGAAAGCAGTTGGAGGACGGCCGCACCCTTGCCGACTACA 172122 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| |||||||| || ||||| || || | |||||| | || || Sbjct 172121 ACATCCAGAAGGAATCTACCCTTCACCTTGTGCTTCGTCTTAGGGGAGG 172073 >seq40947 Length=4604 Score = 170 bits (188), Expect = 2e-37 Identities = 177/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| ||||| || ||||| ||| || | Sbjct 1453 ATGCAGATCTTTGTCAAAACCCTCACAGGCAAGACCATTACACTCGAGGTGGAG--AGCT 1510 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| || ||||| | || || ||||||||||| || || |||| |||| Sbjct 1511 CCGACACCATTGAGAACGTGAAGTCGAAGATCCAGGACAAGGAAGGCATCGCTCCGGACC 1570 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | ||||| || || |||||||| || ||||||| || |||||| | ||||| | Sbjct 1571 AGCAAAGGCTAATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGAACCCTATCTGACTACA 1630 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||| ||||||||||| ||||| || || | || ||||| |||||| Sbjct 1631 ATATCCAGAAGGAATCCACCCTTCACCTTGTGCTCCGCCTTCGTGGTGGA 1680 Score = 145 bits (160), Expect = 9e-30 Identities = 173/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| ||||| || || || || || || || || ||| || Sbjct 1680 AATGCAGATTTTTGTTAAGACTCTTACTGGTAAAACGATCACCCTGGACGTGGAG--AGC 1737 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| ||| ||||| | || ||||| || |||||||| ||||| || || Sbjct 1738 TCGGATACAATTGAGAATGTGAAGTCGAAGATTCAAGATAAGGAGGGGATTCCGCCGGAT 1797 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| | || || |||||||||||||| || ||||| | || || || || ||||| Sbjct 1798 CAGCAAAGGCTCATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGCACGCTTGCGGACTAC 1857 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||| | || || ||||| || ||||| || || | || ||||||||||| || Sbjct 1858 AATATACAGAAAGAATCAACCCTTCACCTCGTTCTTCGCCTTCGCGGTGGGCA 1910 Score = 143 bits (158), Expect = 3e-29 Identities = 165/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||| || || || ||||||||||| ||||| || ||| || | Sbjct 1225 ATGCAGATCTTCATCAAGACTCTCACAGGGAAGACTATTACCCTTGACGTAGAG--AGTT 1282 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || | ||| | ||||| |||||||||||||| || || || |||| Sbjct 1283 CGGACACCATCGAGAACGTTAAGTCCAAAATCCAGGACAAGGAGGGCATCCCACCGGACC 1342 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| || |||||||| ||||| | || ||||| || || || | Sbjct 1343 AGCAGAGGCTGATCTTTGCCGGGAAGCAACTTGAGGACGGCCGCACCCTCGCCGATTACA 1402 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||||||||| || || || || | ||||| Sbjct 1403 ACATCCAGAAGGAATCCACACTCCACCTTGTTCTCCGTCT 1442 Score = 129 bits (142), Expect = 7e-25 Identities = 171/234 (73%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 27402 TATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 |||| ||||| || || || ||||| || ||||||||||| || || |||||||| ||| Sbjct 992 TATAGATGCAGATATTCGTTAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTGGAG- 1050 Query 27461 CAGGT--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518 || | || | || | || | ||| | ||||| ||||||||||||||||| || || Sbjct 1051 -AGTTCCGACACGATCGAGAACGTTAAGACCAAAATCCAGGACAAGGAGGGAATCCCACC 1109 Query 27519 AGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578 ||||||||| | || || || || || || || || ||||| | || ||||| | || Sbjct 1110 GGACCAGCAGAGGCTGATATTCGCCGGGAAACAGCTTGAGGACGGCCGAACCCTCTCCGA 1169 Query 27579 CTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| || |||| ||||| || || || || || || | |||||||| || || Sbjct 1170 CTACAACATCCAGAAGGAGTCTACCCTACACCTCGTTCTTCGTCTTCGGGGAGG 1223 >seq25488 Length=371609 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| ||||| || ||||| || || Sbjct 181333 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATTACCCTGGAGGTGGAATCCTCC 181392 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||||| || || ||||||||||| || |||||||| |||||| Sbjct 181393 GATACCATTGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 181452 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || || |||||||| |||||||||| ||||| || || ||||||||| Sbjct 181453 CAACGCCTTATCTTCGCCGGTAAGCAGCTCGAGGATGGACGTACTCTGGCCGACTATAAT 181512 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | || || ||||| || Sbjct 181513 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTTCGCCTCCGCGGAGG 181559 >seq38797 Length=1288649 Score = 159 bits (176), Expect = 4e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || | ||||||||| | Sbjct 628991 ATGCAGATCTTCGTGAAGACTCTAACCGGCAAGACCATCACCTTAGAGGTTGAGAGCTCT 629050 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || ||||||||||||||||| || || ||||| Sbjct 629051 GACACCATTGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAA 629110 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || ||||||| || ||||| || ||||| || Sbjct 629111 CAGAGGCTGATATTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTACAAC 629170 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||||||| || |||||||| ||||| | ||||| Sbjct 629171 ATTCAAAAGGAGTCTACTCTTCACTTAGTCCTCCGTCT 629208 Score = 149 bits (164), Expect = 7e-31 Identities = 166/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| || | Sbjct 628535 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAG--AGTT 628592 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| || | ||||| || || |||||||||||||| || |||||||| | Sbjct 628593 CGGATACTATTGACAACGTAAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATC 628652 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || || ||||| || || || || || |||| || ||||| || || || | Sbjct 628653 AGCAAAGGCTGATCTTTGCCGGCAAACAGCTTGAAGATGGCCGCACCCTTGCTGATTACA 628712 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||| ||||| ||||||||||| | ||||| Sbjct 628713 ACATCCAGAAGGAGTCCACCCTTCATCTAGTTCTCCGTCT 628752 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || || ||||| || || || |||||||| || | Sbjct 629219 ATGCAGATCTTCGTGAAGACGCTCACTGGAAAGACCATCACCCTAGAGGTTGAA--AGCT 629276 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || | ||||| || || ||||| |||||||| || |||||||||| Sbjct 629277 CCGACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACC 629336 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | || || ||||| || |||||||| ||||| | || ||| | || ||||| | Sbjct 629337 AACAGAGGCTTATCTTTGCGGGCAAGCAACTTGAGGACGGACGCACCTTGGCCGACTACA 629396 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || || ||||| ||||| || || | |||||||| ||||| Sbjct 629397 ACATCCAGAAAGAGTCCACCCTTCACCTTGTTCTCCGTCTTCGTGGTGG 629445 Score = 132 bits (146), Expect = 5e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || || || || ||||| || || ||||| ||| || | Sbjct 629447 ATGCAAATATTTGTGAAGACCCTCACTGGAAAAACTATCACCCTGGAGGTGGAG--AGCT 629504 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| || | ||||| || || |||||||||||||| ||||| || |||| Sbjct 629505 CGGACACAATTGACAACGTAAAGGCAAAGATCCAGGACAAGGAGGGGATTCCACCGGACC 629564 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || || ||||| ||||| || || ||||| | || || || || ||||||| Sbjct 629565 AGCAAAGGCTTATCTTTGCCGGTAAACAGCTTGAGGACGGCCGCACTCTTGCGGACTATA 629624 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || || ||||| || || || ||| | || || || ||||| Sbjct 629625 ACATTCAGAAAGAGTCCACGCTCCACCTCGTCCTCCGCCTCCGTGGTGG 629673 >seq55201 Length=1221137 Score = 100 bits (110), Expect = 3e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 ||||| || || || ||||| |||||||| ||||| ||||| | || |||||||| Sbjct 301300 GCTTTCGCTTGCGTTGAAGGTATTTTCTTCTCTGGCAGCTTCTGCGCCATCTTCTGGCTC 301359 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || ||||| || ||||||| ||||| | || || ||||||||||| ||||| || ||| Sbjct 301360 AAGAAGCGCGGTTTGATGCCCGGTCTCACATTCTCCAACGAGCTGATATCTCGTGATGAG 301419 Query 64846 GGGCTCCA 64853 || ||||| Sbjct 301420 GGTCTCCA 301427 >seq14985 Length=335608 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 27495 TCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACT 27554 ||||||||||||||| ||||| || || || || || | |||||||| || ||||| | Sbjct 170260 TCAGGACAAGGAGGGCATTCCACCTGATCAACAACGATTGATTTTTGCCGGGAAGCAGTT 170201 Query 27555 CGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 || |||| ||| ||| |||| || || || | || ||||| || || || ||||| || Sbjct 170200 GGAAGATGGTCGGACCTTAGCGGATTACAACATTCAGAAGGAGTCAACCCTCCATCTGGT 170141 Query 27615 CTTGCGTCTTCGCGGTGGA 27633 ||| | ||| | || ||| Sbjct 170140 TTTGAGGCTTAGAGGCGGA 170122 >seq33713 Length=603273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 60141 GTAACTCAGTTGGTTAGAGTGCGGGTCTTATGAGCCCGAAGTCGCGGGTTCGACCCCCGC 60200 ||| ||||||||||||||| || ||||||||||||| || ||||||||||||| |||||| Sbjct 79124 GTAGCTCAGTTGGTTAGAGCGCTGGTCTTATGAGCCGGAGGTCGCGGGTTCGAGCCCCGC 79183 Query 60201 CTAGAACAC 60209 | || ||| Sbjct 79184 CGGGACCAC 79192 >seq15058 Length=1696 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 60141 GTAACTCAGTTGGTTAGAGTGCGGGTCTTATGAGCCCGAAGTCGCGGGTTCGACCCCCGC 60200 ||| ||||||||||||||| || ||||||||||||| || ||||||||||||| |||||| Sbjct 332 GTAGCTCAGTTGGTTAGAGCGCTGGTCTTATGAGCCGGAGGTCGCGGGTTCGAGCCCCGC 391 Query 60201 C 60201 | Sbjct 392 C 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569790690390240