Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq15016 141 7e-29
seq25488 138 8e-28
seq19607 138 8e-28
seq41242 129 4e-25
seq38797 127 1e-24
seq40947 120 2e-22
seq14985 86.0 5e-12
>seq15016
Length=583550
Score = 141 bits (156), Expect = 7e-29
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||||||||| ||||| ||||| |||||||||||||| || |||| ||
Sbjct 437738 ACGAGGTGAAGCGTCGATTCCTTCTGGATATTGTAATCGGCGAGGGTACGGCCGTCCTCA 437679
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||| ||||| || ||||| ||||||| || | || ||||| |||
Sbjct 437678 AGCTGCTTCCCGGCGAAGATTAAGCGCTGTTGATCTGGCGGAATGCCCTCCTTATCCTGG 437619
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|| || ||| | || ||| | || || || | ||| |||||||| | || ||||||||
Sbjct 437618 AT-TTTTGCCTTAACGTTGTCGATTGTATCAGAGGACTCCACCTCGAGGGTGATCGTCTT 437560
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| || |||||||| |||||
Sbjct 437559 CCCCGTTAGGGTTTTGACGAAGATCTGCAT 437530
>seq25488
Length=371609
Score = 138 bits (152), Expect = 8e-28
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||| || || ||||| || || | || ||
Sbjct 181541 ACGAGGTGGAGGGTCGACTCCTTCTGGATATTATAGTCGGCCAGAGTACGTCCATCCTCG 181482
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | || ||||| || | ||| | |||||||| |||
Sbjct 181481 AGCTGCTTACCGGCGAAGATAAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 181422
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| || ||| | ||||| |||| |||||||||||||| |||||||||||
Sbjct 181421 ATCTTGGCCTT-AACGTTGTCAATGGTATCGGAGGATTCCACCTCCAGGGTAATCGTCTT 181363
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| ||||||||||| |||||
Sbjct 181362 CCCCGTTAGGGTTTTCACGAAGATCTGCAT 181333
>seq19607
Length=286188
Score = 138 bits (152), Expect = 8e-28
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||||||||| ||||| ||||| |||||||||||||| || |||| ||
Sbjct 225719 ACGAGGTGAAGCGTCGATTCCTTCTGGATATTGTAATCGGCGAGGGTACGGCCGTCCTCA 225660
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||| ||||| || ||||| ||||| | || | || ||||| |||
Sbjct 225659 AGCTGCTTCCCGGCGAAGATTAAGCGCTGTTGATCCGGCGGAATGCCCTCCTTATCCTGG 225600
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | || ||| | || || || | ||| |||||||| | || ||||||||
Sbjct 225599 ATCTT-TGCCTTAACGTTATCGATTGTATCAGAGGACTCCACCTCGAGGGTGATCGTCTT 225541
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || || |||||||| |||||
Sbjct 225540 CCCCGTTAGAGTTTTGACGAAGATCTGCAT 225511
>seq41242
Length=195047
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| |||||||| ||||| || || ||| | || ||
Sbjct 147143 ACAAGGTGGAGTGTGGACTCCTTCTGGATGTTATAATCAGCAAGAGTACGCCCATCCTCG 147202
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||||| | |||||| |||| || | || ||||| |||
Sbjct 147203 AGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGG 147262
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | |||||||||| || ||||| | || ||||||||
Sbjct 147263 ATCTTCGCCTTCACGTTATCAATGGTGTCGGAACTCTCAACCTCAAGGGTGATCGTCTTC 147322
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| ||||||||||| |||||
Sbjct 147323 CCAGTGAGGGTTTTCACGAAGATCTGCAT 147351
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| |||||||| ||||| || || ||| | || ||
Sbjct 152307 ACAAGGTGGAGTGTGGACTCCTTCTGGATGTTATAATCAGCAAGAGTACGCCCATCCTCG 152366
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||||| | |||||| |||| || | || ||||| |||
Sbjct 152367 AGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGG 152426
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | |||||||||| || ||||| | || ||||||||
Sbjct 152427 ATCTTCGCCTTCACGTTATCAATGGTGTCGGAACTCTCAACCTCAAGGGTGATCGTCTTC 152486
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| ||||||||||| |||||
Sbjct 152487 CCAGTGAGGGTTTTCACGAAGATCTGCAT 152515
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||| |||||||| || |||||||||||||||||| ||
Sbjct 171841 CATCCCTCCCCTAAGGCGGAGCACAAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTC 171900
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| || || |||||||| | |||||| || |
Sbjct 171901 AGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCCGG 171960
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||||| | | || ||||||| | ||
Sbjct 171961 GGGAATGCCCTCCTTATCCTGGATCTTAGCCTTCACGTTATCGATTGTGTCGGAGCTCTC 172020
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || ||||| || ||||||||||| ||||| || |||||
Sbjct 172021 CACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCAT 172071
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||| |||||||| || ||||| ||||||||||| ||
Sbjct 172069 CATCCCTCCCCTAAGACGAAGCACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTC 172128
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| || ||| |||| |||| |||||| || |||||||||| | ||||||||| |
Sbjct 172129 GGCAAGGGTGCGGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCCGG 172188
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| |||| | | |||||||||| | ||
Sbjct 172189 GGGGATGCCCTCCTTATCCTGGATCTTAGCTTTCACATTATCGATGGTGTCGGAGCTCTC 172248
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | || || ||||| || |||||||| || || ||||| |||||
Sbjct 172249 CACTTCAAGTGTGATGGTCTTGCCGGTGAGGGTTTTGACAAAGATCTGCAT 172299
Score = 118 bits (130), Expect = 8e-22
Identities = 169/237 (71%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || || | ||||| | || |||||||| || |||||||| |||||
Sbjct 171151 TATTTGCATACCACCACGAAGTCTAAGTACTAGGTGAAGGGTCGATTCCTTTTGAATGTT 171210
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || || || || |||| ||||||||||| |||||||| ||||| | |||||
Sbjct 171211 GTAGTCTGCCAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAATATCAACCTTTGCTG 171270
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280
|| | ||| | || ||||| ||| || || ||||| | | ||||| || |
Sbjct 171271 GTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCAGA 171330
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||||||| | || || || ||||| ||||||||||| || ||||| |||||
Sbjct 171331 GCTCTCCACCTCAAGGGTGATGGTTTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 171387
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||||||||| || ||| || || |||||||| || ||||| ||| | || ||
Sbjct 146914 CACCAGGTGAAGGGTTGACTCTTTCTGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTC 146973
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||||| | |||||| |||| || | || ||||| |||
Sbjct 146974 AAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTG 147033
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||| || ||||| | | || ||||||| || ||||| | || || |||||
Sbjct 147034 TATTTTAGCCTTCACGTTATCAATCGTGTCGGAACTCTCAACCTCAAGGGTGATGGTCTT 147093
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| || ||||| |||||
Sbjct 147094 GCCGGTAAGGGTCTTAACAAAGATCTGCAT 147123
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||||||||| || ||| || || |||||||| || ||||| ||| | || ||
Sbjct 152078 CACCAGGTGAAGGGTTGACTCTTTCTGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTC 152137
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||||| | |||||| |||| || | || ||||| |||
Sbjct 152138 AAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTG 152197
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||| || ||||| | | || ||||||| || ||||| | || || |||||
Sbjct 152198 TATTTTAGCCTTCACGTTATCAATCGTGTCGGAACTCTCAACCTCAAGGGTGATGGTCTT 152257
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| || ||||| |||||
Sbjct 152258 GCCGGTAAGGGTCTTAACAAAGATCTGCAT 152287
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || || || ||| ||||||||||||||| || || || || ||| | || ||
Sbjct 171635 ACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAGTCTGCAAGAGTGCGGCCATCCTCG 171694
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || |||||||| | |||||| || | || | || ||||| |||
Sbjct 171695 AGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTATCCTGG 171754
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | ||||| || | | |||||||| | || || ||||||
Sbjct 171755 ATCTTAGCCTTCACGTTGTCGATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTT 171814
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| || || || |||||
Sbjct 171815 CCAGTAAGGGTCTTGACAAAAATCTGCAT 171843
Score = 100 bits (110), Expect = 2e-16
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||| || || || ||| |||||||| ||||| || ||
Sbjct 171385 CATACCACCCCTAAGACGAAGCACAAGATGGAGGGTGGATTCCTTTTGAATGTTATAGTC 171444
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| || |||||||| | | ||||| || |
Sbjct 171445 AGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGGTCCGG 171504
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | || ||||| ||| |||||| ||| || ||| | |||||||| | |
Sbjct 171505 GGGGATGCCCTCCTTGTCCTGTATCTTAGCCTTTACATTGT--CGATGGTGTCCGAGCTC 171562
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | || || |||||||| ||||||||||| || || || |||||
Sbjct 171563 TCCACCTCAAGGGTGATTGTCTTTCCAGTGAGGGTCTTGACAAATATCTGCAT 171615
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||||| || ||||| || || || ||| | || ||
Sbjct 146687 ACAAGGTGGAGGGTAGATTCCTTTTGAATATTGTAGTCTGCAAGAGTGCGGCCATCCTCA 146746
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || |||||||| | | ||||||||||| ||| | || || || |||
Sbjct 146747 AGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCTTTGTCCTGG 146806
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || || |||| | ||||| |||| || || ||||||
Sbjct 146807 ATCTTTGCCTTCACGTTATCAATTGTATCGGAGCTCTCCACTTCCAAAGTGATGGTCTTT 146866
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||||||| || || |||||
Sbjct 146867 CCCGTAAGAGTCTTCACAAAAATCTGCAT 146895
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||||| || ||||| || || || ||| | || ||
Sbjct 151851 ACAAGGTGGAGGGTAGATTCCTTTTGAATATTGTAGTCTGCAAGAGTGCGGCCATCCTCA 151910
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || |||||||| | | ||||||||||| ||| | || || || |||
Sbjct 151911 AGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCTTTGTCCTGG 151970
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || || |||| | ||||| |||| || || ||||||
Sbjct 151971 ATCTTTGCCTTCACGTTATCAATTGTATCGGAGCTCTCCACTTCCAAAGTGATGGTCTTT 152030
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||||||| || || |||||
Sbjct 152031 CCCGTAAGAGTCTTCACAAAAATCTGCAT 152059
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || || || ||| ||||| || || |||||||| || || ||| | || ||
Sbjct 170951 ACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCTGCAAGGGTGCGACCATCCTCA 171010
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || ||||| | | ||||||||||| || | || ||||| |||
Sbjct 171011 AGCTGTTTTCCAGCGAAGATTAGCCTCTGCTGATCTGGCGGGATCCCCTCCTTGTCCTGG 171070
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | | || || || | || || ||||||
Sbjct 171071 ATCTTTGCCTTGACATTATCGATGGTGTCCGAGCTCTCTACTTCTAAGGTGATGGTCTTT 171130
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || |||||||| || ||||||||
Sbjct 171131 CCAGTAAGCGTCTTCACAAATATTTGCAT 171159
>seq38797
Length=1288649
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | ||||| || || ||| |||||| ||||||||||||||
Sbjct 628993 CATCCCTCCCCTCAGACGGAGAACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATC 628934
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| ||||||||||||| | |||||| || |
Sbjct 628933 AGCAAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 628874
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | ||| || || ||| ||||| || | || ||| | |||||||| | | |
Sbjct 628873 GGGGATACCCTCTTTGTCCTGGATCTT-GGCCTTAACGTTGTCAATGGTGTCAGAGCTCT 628815
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | || |||||||| || ||||| ||||| |||||||| |||||
Sbjct 628814 CAACCTCTAGGGTGATCGTCTTGCCAGTGAGAGTCTTTACGAAGATCTGCAT 628763
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| ||| || ||||||||||| ||||| | ||| |||| ||
Sbjct 629427 ACAAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGTCCGTCCTCA 629368
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||| | | ||| || |||| ||| | || ||||| |||
Sbjct 629367 AGTTGCTTGCCCGCAAAGATAAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTATCCTGG 629308
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| | ||| ||||| | || || ||||||
Sbjct 629307 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCAACCTCTAGGGTGATGGTCTTT 629248
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| |||||||||||||| |||||
Sbjct 629247 CCAGTGAGCGTCTTCACGAAGATCTGCAT 629219
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | || || ||||| ||| |||||| ||||||||||||||
Sbjct 628765 CATCCCTCCCCTCAGACGGAGAACTAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATC 628706
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || ||||| || ||||||||||||| | ||||||||||
Sbjct 628705 AGCAAGGGTGCGGCCATCTTCAAGCTGTTTGCCGGCAAAGATCAGCCTTTGCTGATCTGG 628646
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||| | | | || || || | ||
Sbjct 628645 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCAATAGTATCCGAACTCTC 628586
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || |||||||| || ||||| |||||||||||||| |||||
Sbjct 628585 CACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 628535
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | || | |||||| || ||||||||| |||||||| ||
Sbjct 629221 CATCCCTCCCCTCAGACGGAGGACTAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTC 629162
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| |||||||| |||| | ||| || || |
Sbjct 629161 CGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAATATCAGCCTCTGTTGGTCCGG 629102
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| || ||| | |||||||| | | |
Sbjct 629101 GGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT-AACGTTGTCAATGGTGTCAGAGCTCT 629043
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | || || ||||| || || || |||||||||||||| |||||
Sbjct 629042 CAACCTCTAAGGTGATGGTCTTGCCGGTTAGAGTCTTCACGAAGATCTGCAT 628991
Score = 105 bits (116), Expect = 5e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| |||||| ||| || || ||||| || || || || ||| |||| ||
Sbjct 629655 ACGAGGTGGAGCGTGGACTCTTTCTGAATGTTATAGTCCGCAAGAGTGCGGCCGTCCTCA 629596
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||||||||| | | ||||| || | || | || ||||| |||
Sbjct 629595 AGCTGTTTACCGGCAAAGATAAGCCTTTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGG 629536
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | ||| | || ||||| | | |||||||||| || || || ||
Sbjct 629535 ATCTT-TGCCTTTACGTTGTCAATTGTGTCCGAGCTCTCCACCTCCAGGGTGATAGTTTT 629477
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| |||||||||||||| || ||||||||
Sbjct 629476 TCCAGTGAGGGTCTTCACAAATATTTGCAT 629447
>seq40947
Length=4604
Score = 120 bits (132), Expect = 2e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| ||||| |||||||||||||||||||| ||| |||| ||
Sbjct 1433 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCA 1374
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||||||||||||||||| | |||||| || | || | || ||||| |||
Sbjct 1373 AGTTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGG 1314
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|| || ||| || |||| | |||||||| | || || || | ||||| |||||
Sbjct 1313 ATTTTGGACTT-AACGTTCTCGATGGTGTCCGAACTCTCTACGTCAAGGGTAATAGTCTT 1255
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| | |||||| |||||
Sbjct 1254 CCCTGTGAGAGTCTTGATGAAGATCTGCAT 1225
Score = 105 bits (116), Expect = 5e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| |||| ||| || |||| ||
Sbjct 1205 ACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCA 1146
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| |||||||| || |||| | |||||| || | || | || ||||| |||
Sbjct 1145 AGCTGTTTCCCGGCGAATATCAGCCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGG 1086
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|| || ||| || |||| | || ||||||| |||||||| | || || |||||
Sbjct 1085 ATTTTGGTCTT-AACGTTCTCGATCGTGTCGGAACTCTCCACCTCAAGGGTGATTGTCTT 1027
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| ||||| || |||||
Sbjct 1026 GCCGGTGAGGGTCTTAACGAATATCTGCAT 997
>seq14985
Length=335608
Score = 86.0 bits (94), Expect = 5e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| ||||| || ||||| ||||| || || || |||||| || ||||||||||| |
Sbjct 170121 TTCCGCCTCTAAGCCTCAAAACCAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCCG 170180
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| | || | || |||| ||||||||||||||| ||||| || || ||||| | |
Sbjct 170181 CTAAGGTCCGACCATCTTCCAACTGCTTCCCGGCAAAAATCAATCGTTGTTGATCAGGTG 170240
Query 44229 GCACACCTTCCTTTTCC 44245
| | || ||||| |||
Sbjct 170241 GAATGCCCTCCTTGTCC 170257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359670551004534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |