Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq16195 91.5 2e-13 >seq16195 Length=15917 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| ||||||||||| ||||| || | || | |||||||| || ||||| Sbjct 243 CAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 184 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCAGAAAAGAA 42183 || ||||| ||||||||||| || |||||||| || | |||| || || || | ||||| Sbjct 183 CCCGGCATGAGGCCACGCTTCTTGAGCCAAAAGAT-GGCGCAGAAGGAGCCCAAGAAGAA 125 Query 42184 GATTCCTTCTAC 42195 ||| || ||||| Sbjct 124 GATGCCCTCTAC 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670992925211360