Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq12936 82.4 6e-11 >seq12936 Length=140512 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 15166 GGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCC 15225 |||||| || ||||| ||||||||||| || | | | |||| || | || ||||| Sbjct 38899 GGTGGACTCCTTTTGAATGTTGTAATCTGCAAGCGTACGCCCGTCCTCGAGCTGCTTGCC 38958 Query 15226 AGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTTGCTCT 15284 |||| | || | ||||| ||||| ||||||||||| ||||| ||| ||||| || Sbjct 38959 AGCGAAGATAAGGCGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCCTGAATCTTTGC-CT 39017 Query 15285 TTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAG 15344 | ||| | || || || || | || || || | ||| || || || || || || | Sbjct 39018 TGACATTGTCAATCGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTGAGGG 39077 Query 15345 TTTTTACAAAAATTTGCAT 15363 | || ||||| || ||||| Sbjct 39078 TCTTCACAAAGATCTGCAT 39096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362102236467276