Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9737 95.1 3e-14 >seq9737 Length=173456 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| || | ||| || || | | |||||| | || | Sbjct 49474 ATGAAAGATGATAGTATTGAGGGAATTTATGATACTCTCTCGGAATGTGCTGTGATAAGC 49415 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || ||| || ||||||||||| || ||||||||| |||| || || | |||||||| Sbjct 49414 AAATCTGCTGGAGGAATTGGTGTCTCAATCCACAATATTCGAGCTACTGGG-AGTTACAT 49356 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| ||| || || || | ||||| ||||| ||||| || | |||| Sbjct 49355 TCGAGGAACAAATGGAACTTCTAACGGAATTGTTCCTATGCTGCGTGTTTTCAATGATAC 49296 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||| | || || || || |||||||| ||| | ||||| Sbjct 49295 TGCCCGTTATGTTGATCAAGGTGGAGGCAAGAGAAAAGG 49257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303062432434952