Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016-
09-29] 17,436 sequences; 589,166,415 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq15625 159 4e-34
seq8841 156 5e-33
seq12320 152 6e-32
seq11548 149 7e-31
seq12880 141 1e-28
seq12004 125 8e-24
seq12418 122 1e-22
seq16592 120 3e-22
seq12936 120 3e-22
seq12070 120 3e-22
seq11062 118 1e-21
seq9352 113 5e-20
seq2366 111 2e-19
seq11736 100 3e-16
seq8356 100 3e-16
seq1832 98.7 1e-15
seq6651 84.2 2e-11
>seq15625
Length=123999
Score = 159 bits (176), Expect = 4e-34
Identities = 169/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| |||||| |||| || |||||| ||||| |||||||||| || ||| | ||
Sbjct 106871 CGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGTGGCCG 106812
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | |||||||||||| | ||| | || ||| |||
Sbjct 106811 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCTTTG 106752
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| ||||| ||| | | | |||||||| ||||| |||| |||||
Sbjct 106751 TCCTGGATCTTGCCCTTGA-CGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGAT 106693
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| || ||||||||||| || || ||||| ||||| |||
Sbjct 106692 CGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTTG 106653
>seq8841
Length=75027
Score = 156 bits (172), Expect = 5e-33
Identities = 165/215 (77%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| |||| || |||||| ||||| |||||||||| || ||||| |||| ||
Sbjct 23450 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 23509
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||||||||| || | |||||||||||| | ||| | || |||||||||
Sbjct 23510 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTG 23569
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
|||||| ||| | ||| | | | ||||| || ||||| |||| ||||||||| |
Sbjct 23570 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCT 23628
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
| |||||||| || || || ||||| ||||| |||
Sbjct 23629 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 23663
>seq12320
Length=36718
Score = 152 bits (168), Expect = 6e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| |||| || |||||| ||||| |||||||||| || ||||||||||| ||
Sbjct 5358 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCTCGTCCTC 5299
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||| || ||||| || | ||||||||||| | ||| | | ||||||||||
Sbjct 5298 CAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 5239
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
| ||| ||| | | ||||||||||| || ||||| |||| |||||| || ||
Sbjct 5238 CACCTTGGCCTTCACGTTTGCCACCGTGTCCGACGCCTCCACCTCCAGCGTGATCGTCTT 5179
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|||||| ||||| || || ||||| ||||| |||
Sbjct 5178 GCCCGTGAGCGTCTTCACGAAGATCTGCATCTTG 5145
>seq11548
Length=265335
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || || | ||| | |||||| || | || |||||||| ||||| |||||||| |
Sbjct 38874 CCACCCCTGAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCA 38815
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| |||||| | || |||||||||||||||||||| || | ||||||||||| | ||
Sbjct 38814 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCTGGAGGG 38755
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||||| |||||| ||||| | | | ||||| || |||||
Sbjct 38754 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCCACC 38695
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||||| ||||| || || || ||||||||||| |||||
Sbjct 38694 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 38648
Score = 125 bits (138), Expect = 8e-24
Identities = 162/220 (74%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | |||||| || | || |||||| ||||| |||||||||| || ||||| |
Sbjct 39787 ACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 39728
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || |||||||||||||| ||||||| ||||||||||| | || | || ||||||
Sbjct 39727 ATCCTCCAGCTGCTTGCCGGCAAATATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 39668
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553
|||| ||| || ||| | ||| | | | ||||| |||| || || |||| |
Sbjct 39667 GTCCTGGATTTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTC---TCAACCTCCAGAG 39612
Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||||| ||||| |||| || || |||||||| |||||
Sbjct 39611 TGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 39572
Score = 123 bits (136), Expect = 3e-23
Identities = 158/214 (74%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | || |||||||| ||||| |||||||| | || ||||| | || ||
Sbjct 39553 CACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTC 39494
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|| |||||||| || || |||| |||||||||||| | || | || ||||||||||
Sbjct 39493 CAGTTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 39434
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGG 46559
|||||| ||||| ||| | | | ||||| |||| || || |||| || ||||
Sbjct 39433 GATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TCAACCTCCAAGGTAATGG 39378
Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||||| || || || || || ||||| |||||
Sbjct 39377 TTTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 39344
>seq12880
Length=140709
Score = 141 bits (156), Expect = 1e-28
Identities = 162/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | ||| |||||| ||||| |||||||||| || ||||| |||| ||
Sbjct 18828 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 18887
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||||||||| || | ||||||||||| | ||| | || |||||| |||
Sbjct 18888 GAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTG 18947
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
||||| ||| ||| | | | ||||| || ||||| |||| ||||||||| |
Sbjct 18948 AATCTT-GGCTTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCT 19006
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
| |||||||| || || || ||||| ||||| |||
Sbjct 19007 TTCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 19041
>seq12004
Length=146743
Score = 125 bits (138), Expect = 8e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| |||||||| | ||| ||||| ||||| |||||||| | || ||||| |
Sbjct 145841 CGCAGGACCAGATGGAGCGTAGATTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCA 145782
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || |||||||| || || || || | |||||||||||| | || | || |||||||
Sbjct 145781 TCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTG 145722
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|| ||||||| ||| | ||| | | | ||||| ||| || || |||| ||||||
Sbjct 145721 TCTTGGATCTTCGCCTTCA-CGTTGTCAATGGTGTCAGACGACTCGACCTCCAGCGTGAT 145663
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || ||||| || || |||||||| |||||
Sbjct 145662 GGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 145627
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | | ||| | ||||| |||| || |||||| || || || || || |
Sbjct 145627 TGCCACCACGGAGACGGAGCACCAAGTGCAGGGTGGACTCCTTCTGTATGTTATAATCCG 145568
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|| ||||| |||| || ||||||||||||||||| || | |||||||||||| | ||
Sbjct 145567 CGAGTGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 145508
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || ||||||||| ||||||| ||| | | | | || || ||| ||||
Sbjct 145507 GGATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTATCGATTGTATCAGACGACTCCA 145448
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||| |||||||| || || |||| || || |||||||| |||||
Sbjct 145447 CCTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACAAAGATCTGCAT 145399
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || || || |||||||| | || ||||| | || || |||||||| || |||||
Sbjct 145362 CTCTTTCTGAATGTTGTAGTCAGCTAAGGTGCGACCATCCTCAAGCTGCTTCCCCGCGAA 145303
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | || |||||||||| |||||| ||| | |
Sbjct 145302 GATGAGACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATT 145243
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || || || || | |||||||| || || |||| || || ||
Sbjct 145242 GTCGATTGTGTCTGAGGACTCAACCTCTAGTGTGATGGTCTTTCCAGTCAAGGTCTTCAC 145183
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 145182 AAAGATCTGCAT 145171
>seq12418
Length=36051
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||||| || | || | |||||| ||||| |||||||| | || ||||| ||
Sbjct 33108 CGCAGAACCAGGTGGAGTGGAGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGTCCG 33167
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || || | ||| || || || || | |||||||||||| | ||| | || |||||||
Sbjct 33168 TCCTCAAGTTCCTTACCAGCAAAGATTAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTG 33227
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||||| ||| | | | | ||||| ||| ||||| |||| ||||||
Sbjct 33228 TCCTGGATCTTCGCCTTCACATTGTCAATAGTGTCAGACGACTCCACCTCCAGGGTGATG 33287
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | ||||| || || |||||||| |||||
Sbjct 33288 GTCTTTCTGGTCAGGGTCTTCACAAAGATCTGCAT 33322
Score = 100 bits (110), Expect = 3e-16
Identities = 138/192 (72%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| || ||||| | | || ||| |||| ||||||||||||||||| ||
Sbjct 33813 CTCCTTCTGGATGTT-TAGTCAGCATGCGTCCGCCCGTCCTCGAGCTGCTTGCCGGCAAA 33871
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||||||| || | | | | |||||||||| |||||| ||||| |
Sbjct 33872 GATCAGGCGCTGCTGATCCGGTTGGATCCCCTCCTTGTCCTAGATCTTTGCCTTGACATT 33931
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || || || || || || | |||||||| ||||| || || || || ||
Sbjct 33932 GTCAATTGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCAC 33991
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 33992 AAAGATCTGCAT 34003
>seq16592
Length=119134
Score = 120 bits (132), Expect = 3e-22
Identities = 127/165 (77%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 46430 GTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACG 46489
|||||| | || || ||||||||||||||||| |||| |||||||||||| | || | |
Sbjct 52665 GTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATG 52606
Query 46490 CTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATC 46548
| |||||||||| |||||| ||||| ||| | | | ||||| || ||||| ||
Sbjct 52605 CCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGGACTCCACCTC 52547
Query 46549 CACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||||||| ||||| || || || ||||||||||| |||||
Sbjct 52546 GAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 52502
Score = 118 bits (130), Expect = 1e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| |||||||||||||| | || ||||| | || || ||||||||||| |||||
Sbjct 53138 CTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 53079
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | || |||||||||| |||||| ||| | |
Sbjct 53078 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATT 53019
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || |||| |||||||| ||||| || || || ||
Sbjct 53018 GTCAATGGTGTCAGAGCTC---TCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTT 52962
Query 46579 AACAAAGATTTGCAT 46593
|| ||||| |||||
Sbjct 52961 CACGAAGATCTGCAT 52947
>seq12936
Length=140512
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||| || | || || ||| |||| || |||||||||||||| ||
Sbjct 38450 TCCTTCTGGATGTTGTAATCCGCCAGGGTACGCCCGTCCTCAAGCTGCTTGCCGGCAAAA 38509
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||| | || | || |||||||||| ||||||| ||| | |
Sbjct 38510 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTG 38569
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||| || || || |||| |||||||| ||||| || ||||| || ||
Sbjct 38570 TCGATAGTGTCTGAAGACTCGACCTCCAAAGTGATGGTCTTGCCGGTGAGCGTCTTCACG 38629
Query 46583 AAGATTTGCAT 46593
||||| |||||
Sbjct 38630 AAGATCTGCAT 38640
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| | || ||| | || || ||||| || ||||||||| || ||||| || |
Sbjct 38868 TGCCTCCACGTAGACGGAGGACAAGGTGCAAGGTGGACTCCTTTTGAATGTTGTAATCTG 38927
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|| || ||| |||| |||||||||||||| ||||| || | ||| |||||||| | |
Sbjct 38928 CAAGCGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAG 38987
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | ||||||||| ||||| ||||| | | | |||||| || ||||
Sbjct 38988 GAATTCCTTCCTTGTCCTGAATCTTTGCCTTGACATTGTCAATCGTGTCAGAAGACTCCA 39047
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | ||||| || ||||| || || || || |||||||| |||||
Sbjct 39048 CCTCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 39096
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| |||| || | ||| ||||| |||||||| | || ||||| | || ||
Sbjct 38659 CACCAGGTGCAGGGTTGATTACTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 38718
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||| | ||| || || | |||||||||||| | || | | ||| ||||||
Sbjct 38719 GAGCTGCTTCCTGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATACCCTCGTTGTCCTG 38778
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||| | | | ||||| || ||||| |||| |||||||| ||
Sbjct 38779 GATCTTTGCCTTCACATTGTTGATGGTGTCAGAGGACTCCACCTCCAAGGTGATGGTCTT 38838
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || ||||| || |||||
Sbjct 38839 GCCGGTGAGGGTCTTCACAAAAATCTGCAT 38868
>seq12070
Length=146516
Score = 120 bits (132), Expect = 3e-22
Identities = 169/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | ||| || | | ||| | |||||| || | ||| |||||| ||||| |||||
Sbjct 64985 TTACTGGCCACCACGGAGACGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTA 65044
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
||| | || ||||| | || || ||||||||||| || || || | |||||||||||
Sbjct 65045 GTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTC 65104
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538
| || | || |||||| ||| ||||||| ||| | ||| | | | ||||| |
Sbjct 65105 CGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCAGATG 65163
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| ||||| |||| |||||||| ||||| || || || || || ||||| |||||
Sbjct 65164 ACTCCACCTCCAAAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 65218
Score = 116 bits (128), Expect = 4e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | || |||||| ||||| |||||||| | || ||||| | || ||
Sbjct 65913 CACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTC 65972
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||||| ||||| || | ||||||||||| | || | || ||||||||||
Sbjct 65973 CAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 66032
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
||||||| ||| | ||| | | | |||||| || || || || | ||| ||||| |
Sbjct 66033 GATCTTCGCCTTCA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTAATGGTCT 66091
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || || || || ||||| |||||
Sbjct 66092 TGCCGGTGAGGGTCTTCACGAAGATCTGCAT 66122
>seq11062
Length=46929
Score = 118 bits (130), Expect = 1e-21
Identities = 173/242 (71%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || || || || | ||||| || | || ||||||| ||||| |||||||| |
Sbjct 43935 CCACCCCTCAAGCGGAGCACCAAGTGGAGGGTGCTCTCCTACTGGATGTTGTAGTCCGCA 43876
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| |||||| | || |||||||||||||||||||| || | | ||||||||| | ||
Sbjct 43875 AGGGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCTGGAGGG 43816
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||||| ||| || ||||| | | | ||||| || |||||
Sbjct 43815 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAAGACTCCACC 43756
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAACAA 46606
|| | |||||||| ||||| || || || || || || || |||| | |||| ||| ||
Sbjct 43755 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCA-TCTGCA-AAAGAA 43698
Query 46607 CA 46608
||
Sbjct 43697 CA 43696
Score = 89.7 bits (98), Expect = 6e-13
Identities = 147/211 (70%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | || |||||| ||||| |||| ||| | || ||||| | || ||
Sbjct 44147 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTCGTCAGCGAGGGTGCGGCCATCCTC 44088
Query 46444 GAGCTGCTTGCCGGC-GAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 46502
|||||||||||||| || |||| || || ||||| | || | || ||||||||||
Sbjct 44087 CAGCTGCTTGCCGGCAAAAAATCAGACGATGTTGGTCCGGAGGGATGCCCTCCTTGTCCT 44028
Query 46503 TGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
|||||| ||| | | | | ||||| || || || || | |||||||| |
Sbjct 44027 GGATCTTGGCCTTCACATTGTCAATGGTGTCAAAAGACTCAACCTCAAGGGTGATGGTCT 43968
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || | || |||||||| |||||
Sbjct 43967 TGCCAGTGAGGATCTTCACAAAGATCTGCAT 43937
>seq9352
Length=67289
Score = 113 bits (124), Expect = 5e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | || |||||| ||||| |||||||||| || || || | || ||
Sbjct 47168 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCATCCTC 47227
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||||| ||||| || | |||||||||||| | || | || ||||||||||
Sbjct 47228 AAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 47287
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
|||||| ||| | ||| | | | ||||| || || || || | |||||||| |
Sbjct 47288 GATCTTTGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCAACCTCAAGGGTGATGGTCT 47346
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || || || ||||| || |||||
Sbjct 47347 TGCCAGTGAGGGTCTTGACAAAAATCTGCAT 47377
Score = 105 bits (116), Expect = 8e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||||| || | || ||||| ||||| |||||||| | || ||||| |
Sbjct 47390 ACGCAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCC 47449
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || ||||||||||| || || || | | ||||||||| | || | || |||||
Sbjct 47450 GTCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTT 47509
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||| || || || || | |||||
Sbjct 47510 GTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGAT 47569
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| || || || ||||| ||||| |||||
Sbjct 47570 GGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 47605
>seq2366
Length=105829
Score = 111 bits (122), Expect = 2e-19
Identities = 144/196 (73%), Gaps = 11/196 (6%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||||| || ||||| |||| |||||||||||||||| |||
Sbjct 75917 CTCCTTTTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGTGAA 75858
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGAT----CTTCTTCTTGA 46517
|| | |||| ||||||| | || | || ||||||||| ||| |||| ||
Sbjct 75857 GATGAGGCGCCGCTGGTCCG-GGGGATGCCATCCTTGTCCTGGATTGGCCTTCACATT-- 75801
Query 46518 GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
|||| | ||||| || ||||| |||| |||||||| || || || || || |
Sbjct 75800 --GTCG--ATGGTGTCAGATGACTCCACCTCCAGTGTGATGGTCTTTCCAGTGAGGGTCT 75745
Query 46578 TAACAAAGATTTGCAT 46593
| |||||||| |||||
Sbjct 75744 TCACAAAGATCTGCAT 75729
Score = 105 bits (116), Expect = 8e-18
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||| | || ||||| |||| || |||||||||||||| ||
Sbjct 75692 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCAAGCTGCTTGCCGGCAAA 75633
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
| | ||||||||| || | || | || |||||||||| |||||| ||| | |
Sbjct 75632 GACGAGGCGCTGCTGTTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATT 75573
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || || || |||| |||||| | ||||| ||||| || || ||
Sbjct 75572 GTCGATCGTGTCCGAGGACTCTACCTCCAAGGTGATGATCTTGCCAGTCAGGGTCTTCAC 75513
Query 46582 AAAGAT 46587
||||||
Sbjct 75512 AAAGAT 75507
>seq11736
Length=148999
Score = 100 bits (110), Expect = 3e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || || | ||||| || || || | ||| |||||| || || |||||||| |
Sbjct 10002 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 9943
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || || |||||||| || || || | | ||||||||| | ||
Sbjct 9942 AGGGTGCGGCCGTCCTCTAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 9883
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| || |||||||||| |||||| |||| | | | ||||| |||| ||
Sbjct 9882 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATAGTGTCTGAGCTC---TCG 9826
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | |||||||| ||||| || || || ||||||||||| |||||
Sbjct 9825 ACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 9776
>seq8356
Length=84350
Score = 100 bits (110), Expect = 3e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| || |||| ||| ||||| || | |||||| || | || |||| || ||||
Sbjct 83246 ACAAGGTGCAGTGTGGACTCCTCCTGAACATTGTAATCAGCAAGCGTGCATCGGTTGTCG 83187
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| || | |||||| ||||| | ||| | ||||||||||||
Sbjct 83186 AGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATCCTCTCCTTGTCCTCA 83127
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | ||||| | || ||||| | | |||||||| ||
Sbjct 83126 ATCTTGGCCTTGACATTGTTGATAGTGTCACAAGACTCCACCTTAAGGGTGATGGTCATG 83067
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCA 46592
|| || || || || |||||||| ||||
Sbjct 83066 CCAGTGAGGGTCTTCACAAAGATCTGCA 83039
>seq1832
Length=108017
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| || | || || | |||||| |||| || |||||| ||||| ||||||||||
Sbjct 497 GCCGCCACGTAGGCGGAGCACCAGGTGCAGCGTCAACTCCTTCTGGATGTTGTAGTCGGC 438
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
|| ||||||||||| || ||||||||||| ||||| |||| ||||||||| || | ||
Sbjct 437 CAGGGTGCGCTCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCAGGAGG 378
Query 46486 CA 46487
||
Sbjct 377 CA 376
>seq6651
Length=371268
Score = 84.2 bits (92), Expect = 2e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||||| || ||||| | || || |||||||| ||||||||
Sbjct 148648 CTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAA 148589
Query 46462 TATCAAGCGCTGCTGGTCGGCCGG 46485
|||| ||||||||||| | |||
Sbjct 148588 GATCAGACGCTGCTGGTCCGGCGG 148565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565115206290720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |