Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq11548 86.0 4e-12 >seq11548 Length=265335 Score = 86.0 bits (94), Expect = 4e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || |||| || | |||||| || || || || || || || || | ||| || Sbjct 39558 CGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCA 39499 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||| ||| || || ||||||| | |||||||| |||| ||| | ||| || ||| Sbjct 39498 TCCTCCAGTTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 39439 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTG-TGTCTGCGCTTTCCACGTCCAAAGTAAT 39683 || || || || | ||| | | || |||| | ||| || || ||||| ||||| Sbjct 39438 TCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTCTCAACCTCCAAGGTAAT 39380 Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || | || || |||||||||||||| Sbjct 39379 GGTTTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 39344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347295783525788