Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016-
09-29] 17,436 sequences; 589,166,415 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq13858 360 2e-94
seq8389 233 2e-56
seq12320 168 7e-37
seq15625 154 1e-32
seq9352 152 5e-32
seq8841 149 6e-31
seq16195 141 9e-29
seq12880 134 1e-26
seq12936 131 2e-25
seq11548 129 6e-25
seq11062 129 6e-25
seq12070 125 7e-24
seq11736 118 1e-21
seq12004 113 5e-20
seq1832 105 7e-18
seq5775 104 2e-17
seq2366 93.3 4e-14
seq6651 86.0 6e-12
seq8356 82.4 8e-11
>seq13858
Length=133588
Score = 360 bits (398), Expect = 2e-94
Identities = 583/827 (70%), Gaps = 15/827 (2%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|||||||| || || || || |||| || || |||||| ||| | || || ||||||
Sbjct 59785 TTCTCAAAGAAGTTTGTCTTCCCCTGCAGCGAGATGAGCTCCATCCAGTCGAATGGGTTG 59844
Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744
|| | |||||| | | ||| | || | | |||||| | ||| || |||||||||
Sbjct 59845 GCGGCGTTGTACATCCTCTTGCAGCCGAGCGCCATGAGCAGGCGGTCAGCAACGAACTCG 59904
Query 132745 ATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCTTCGGT 132803
||||| || |||| ||| || | || | || ||| ||||| ||||| |||
Sbjct 59905 ATGTACTGGCTCATGAGCCCGCCGTTCATGCCGACGAG-CGCGACCGGGAGCGCGTCGCA 59963
Query 132804 GA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862
|| ||| || |||||||| |||| ||||||| |||||| || | ||||| || ||
Sbjct 59964 GACGAACTCGC-GCTCGATGTCGACGGCGTCGGCGACGATCTCGCGGACGCGGTCCTCG- 60021
Query 132863 TCGGCCGTTGCACCAAAT-GCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921
||| | | ||| | | | | | | | ||| || |||||||| || | |||||||
Sbjct 60022 TCGAGCTTGCCACGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCG 60081
Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981
|| | ||| ||||| |||||| ||| || | ||| |||||||||||||| || ||||||
Sbjct 60082 TCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCGCGCTTCTTGAGC 60141
Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041
|| || |||||| ||| |||||| ||||||| |||||||||| ||||| || ||
Sbjct 60142 CAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAGGCGACG 60201
Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101
||||||||| |||| | || || | |||||||||||| |||||| ||||||||
Sbjct 60202 AGGCGCTCGGCGAA---GCGCTCCCCGCCGTCGATCCAGCGCATCGCCCAGTCGGCCTTG 60258
Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA 133161
|||| || | || ||||||||| || | ||| ||||| | |
Sbjct 60259 CGGCGGACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCGGCGCCGTCG 60318
Query 133162 CGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATT 133221
|| | ||| || || | || ||| ||||| |||||||| | |||||| ||||||||
Sbjct 60319 CGGATGTACGTCTCCAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCGATGGCGATC 60378
Query 133222 TGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281
|| ||||| || ||| ||||||||| | |||||||| || ||| || | |
Sbjct 60379 TGGAAGCCATAGAAGGCGCGCGCCTCGGCGACCTGCACGTCGGACATGAAGCGGGAGGCG 60438
Query 133282 AGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAA 133341
|| || ||| |||||||||||| ||||||||| ||||| |||||||| ||||||
Sbjct 60439 AGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGCACGTGGGAGATGAAG 60498
Query 133342 TGGCGCTCGTTGTCGTTCAAGCGC----TCCCAGTCGCGCGTGTCCTTGGACAGGTCCAC 133397
|||||||||| | | ||||| ||||||| ||||| ||| || ||||||||
Sbjct 60499 TGGCGCTCGTCG-GGGGAGAGCGCCGAATCCCAGTGGCGCGCGTCGGCCGAGAGGTCCAC 60557
Query 133398 CTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCC 133444
||||||| ||||||| || |||||| | || || ||||| | |||||
Sbjct 60558 CTCCTCGGCGGTCCAGAAGGACGCCACCGCCTTCTTGTAGA-ACTCC 60603
>seq8389
Length=83750
Score = 233 bits (258), Expect = 2e-56
Identities = 344/481 (72%), Gaps = 7/481 (1%)
Strand=Plus/Minus
Query 132967 CCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026
||||| || |||||||| || |||||| ||| |||||| ||||||| ||||||||||
Sbjct 80432 CCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACG 80373
Query 133027 GCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGC 133086
||||| || || ||||||||| |||| ||| | || | ||||||||||||
Sbjct 80372 CAGGCGAAGGCGACGAGGCGCTCGGCGAAGC--GCT-CGCCGCCGTCGATCCAGCGCATG 80316
Query 133087 GCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGT 133146
||||| |||||||| |||| || | || ||||||||| |||| |||
Sbjct 80315 GCCCAGTCGGCCTTGCGCCGGACGGCGGGGACAGTGTCGATGGCGCGGAACAGGCGGTCC 80256
Query 133147 TTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACG 133206
||||| | | || | |||||| |||| || ||| ||||| |||||||| | |
Sbjct 80255 TTCTCGGCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATG 80196
Query 133207 TTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGA 133266
||||| |||||||| || |||||||| ||| || |||||| | |||||||| ||
Sbjct 80195 TTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGCGACCTGCACGTCGGAC 80136
Query 133267 GCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGC 133326
||| || | |||| || ||| |||||||||||| ||||||||| ||||| |||
Sbjct 80135 ATGAAGCGGGAGGCCAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGC 80076
Query 133327 ACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA--AGCGC-TCCCAGTCGCGCGTGTCC 133383
||||| || ||| |||||||||| | | | | | | ||||||| || | |||
Sbjct 80075 ACGTGGGAGACGAAGTGGCGCTCGTCGGGGGAGAGCACCTCGTCCCAGTGTCGGGCGTCG 80016
Query 133384 TTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTC 133443
||| ||||||||||||||| | ||||| || |||||| | || || ||||| | ||||
Sbjct 80015 CCGGAGAGGTCCACCTCCTCGGCCGTCCAGAAGGACGCCACCGCCTTCTTGTAGA-ACTC 79957
Query 133444 C 133444
|
Sbjct 79956 C 79956
>seq12320
Length=36718
Score = 168 bits (186), Expect = 7e-37
Identities = 182/236 (77%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || |||||||||||||| || ||||| | || || |||||
Sbjct 5146 AAGATGCAGATCTTCGTGAAGACGCTCACGGGCAAGACGATCACGCTGGAGGTGGAGGCG 5205
Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358
| |||| || ||||||| | || | || | | ||||| ||||| | ||||||| |
Sbjct 5206 TCGGACACGGTGGCAAACG-TGAAGGCCAAGGTGCAGGACAAGGAGGGGA-TCCCGCCGG 5263
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||||||||| | |||||| || |||||||| ||||||||||| || |||||
Sbjct 5264 ACCAGCAGCGGCTCATCTTCGCGGGGAAGCAGCTGGAGGACGAGCGCACGCTGGCCGACT 5323
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474
|||||||||| ||||| |||||||||| ||||||| || | | |||||| ||
Sbjct 5324 ACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCGGC 5379
>seq15625
Length=123999
Score = 154 bits (170), Expect = 1e-32
Identities = 177/233 (76%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || ||||| ||||| || || |||||| | || || ||| |
Sbjct 106654 AAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACCCTGGAGGTGGAGAGC 106713
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358
| ||||| | | | |||| | || | || |||| ||||||||||| | ||||||| |
Sbjct 106714 AGCGACACCATCGACAACG-TCAAGGGCAAGATCCAGGACAAAGAGGGCA-TCCCGCCGG 106771
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||| ||||| | ||| ||||| ||||| || |||| | ||| ||| |||||
Sbjct 106772 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCACACGCTCGCCGACT 106831
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||||| ||||| |||||||||| |||||||||| | | ||||||
Sbjct 106832 ACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTCCGCGGCGGC 106884
>seq9352
Length=67289
Score = 152 bits (168), Expect = 5e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| || |
Sbjct 47605 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 47546
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || |||||| | |||||
Sbjct 47545 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 47486
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| ||||||| | || ||||| ||||| || |||| ||||||||| |||||||||
Sbjct 47485 CAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCGCTGACTACAAC 47426
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| |||||| | || || || ||||||||||| || | || ||
Sbjct 47425 ATCCAGAAGGAATCCACCCTCCACCTGGTGCTGCGTCTGCGTGGTGG 47379
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| ||||||||| | || || ||| || |
Sbjct 47377 ATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCG 47318
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||| |||| ||||| ||||| |||||| | |||||
Sbjct 47317 GACACCATCGACAACG-TGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 47259
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| ||||| || || | || ||||| |||||||||
Sbjct 47258 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCCGACTACAA 47199
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || || ||||||| ||
Sbjct 47198 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCG 47163
>seq8841
Length=75027
Score = 149 bits (164), Expect = 6e-31
Identities = 168/220 (76%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || ||||| || |||||||| | || || ||| ||
Sbjct 23662 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCC 23603
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358
| |||| | | | |||| | || | || |||| ||||| ||||| || |||||||
Sbjct 23602 TCGGACACCATCGACAACG-TGAAGGCCAAGATCCAAGACAAGGAGGGCAT-CCCGCCGG 23545
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| |||||
Sbjct 23544 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 23485
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||||| ||||| |||||||||| ||||||| ||
Sbjct 23484 ACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCG 23445
>seq16195
Length=15917
Score = 141 bits (156), Expect = 9e-29
Identities = 248/354 (70%), Gaps = 6/354 (2%)
Strand=Plus/Minus
Query 132676 AAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCC 132735
|| |||||||| | |||||| ||| ||| | || | | |||||| | ||| |
Sbjct 462 AATGGGTTGGCGGCGTTGTACATCTTCTTGCAGCCGAGCGCCATGAGCAGGCGGTCTACG 403
Query 132736 ACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGC-ACCGGCAG 132794
|||||||||||||| || |||| | | | || | | || || ||| || || ||
Sbjct 402 ACGAACTCGATGTACTGGCTCATGAGTCCACCGTTCA-TGCCGACAAGCGCGACGGGGAG 344
Query 132795 CGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCG 132854
||| ||| || ||| ||||| || ||| ||||||| |||||| || | |||||
Sbjct 343 CGCGTCGCAGACAAACTCGCGCTCGGTGTTGACGGCGTCGGCGACGATCTCGCGGACGCG 284
Query 132855 CGCCGCGCTCGGCCGTTGC-ACCAA-ATGCTTGAACATCAAGCAAGCAAAGTCGCAATGC 132912
||| || || || |||| || || | | | | ||| || |||||||| |||
Sbjct 283 GGCCTCG-TCAACC-TTGCTACGAAGGAGGTCRTTGAGGAGGCAGGCGAAGTCGCAGTGC 226
Query 132913 AAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGT 132972
| ||||||||| | ||| ||||| |||||| ||| || | ||| ||||||||||| ||
Sbjct 225 AGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCACGC 166
Query 132973 TTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026
|| ||||||||||| |||||| ||| |||| | ||||||| |||||| |||
Sbjct 165 TTCTTGAGCCAAAAGATGGCGCAGAAGGAGCCCAAGAAGAAGATGCCCTCTACG 112
>seq12880
Length=140709
Score = 134 bits (148), Expect = 1e-26
Identities = 165/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || ||||| || |||||||| | || || ||| ||
Sbjct 19040 AAGATGCAGATCTTCGTGAAGACCCTGACGGGAAAGACCATCACGTTGGAGGTGGAGTCC 18981
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358
| |||| | | | |||| | |||| || || | || || ||||| || |||||||
Sbjct 18980 TCGGACACCATCGACAACG-TGAAAGCCAAGATTCAGGATAAGGAGGGCAT-CCCGCCGG 18923
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||||||||| | ||| ||||| ||||| || |||| ||||||||| |||||
Sbjct 18922 ACCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 18863
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||||| ||||| | || || || ||||||| ||
Sbjct 18862 ACAACATCCAGAAGGAGTCCACACTCCACCTGGTGCTCCG 18823
>seq12936
Length=140512
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || |||||||| ||||| |||||||| | || |||||| | |
Sbjct 38640 ATGCAGATCTTCGTGAAGACGCTCACCGGCAAGACCATCACTTTGGAGGTCGAGTCTTCA 38581
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 38580 GACACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 38521
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||||| || ||||| ||||| || |||| ||| ||||| || ||||||
Sbjct 38520 CAGCGCCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACCCTGGCGGATTACAAC 38461
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| |||||| | || || ||| | || |||||
Sbjct 38460 ATCCAGAAGGAATCCACCCTCCATCTTGTCCTGCG 38426
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| ||||||||| | || || ||| || |
Sbjct 38868 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGTCCTCT 38809
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||| ||||| ||||| | |||||
Sbjct 38808 GACACCATCAACAATGTGAAGGCAAAGATCCAGGACAACGAGGGTATTCCTCCGGACCAG 38749
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | || | || ||||| || || | |||||||| |||||||||
Sbjct 38748 CAGCGCCTCATCTTTGCCAGGAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTACAAC 38689
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
||||| ||| || | || ||||| |||||||
Sbjct 38688 ATCCAGAAGTAATCAACCCTGCACCTGGTGCT 38657
>seq11548
Length=265335
Score = 129 bits (142), Expect = 6e-25
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||||||||| ||| | || || ||| | |
Sbjct 39344 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGAGGTTGAGAGCTCT 39403
Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 39404 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 39462
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| || ||||| || ||||| || | |||||||| ||||||||
Sbjct 39463 GCAGCGCCTGATTTTTGCTGGCAAGCAACTGGAGGATGGCCGCACCCTTGCAGACTACAA 39522
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| ||| || || || ||||||| || |||| || ||
Sbjct 39523 CATCCAGAAGGAGAGC-ACTCTCCACCTGGTGCTCCGCCTGAGGGGTGG 39570
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| ||||||||| |||| || ||| | |
Sbjct 38648 ATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 38707
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| || || | |||||
Sbjct 38708 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 38767
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||||||||| | ||| ||||| ||||| || || | |||||| || |||||||||
Sbjct 38768 CAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACGCTTGCTGACTACAAC 38827
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||| || || || ||||||| ||| | || || ||
Sbjct 38828 ATCCAGAAGGAGAGC-ACCCTCCACCTGGTGCTCCGTCTCAGGGGTGG 38874
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || ||||| |||||||| | || || ||| | ||
Sbjct 39572 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAGAGCTCC 39631
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| ||||| ||||| || ||| | |||||
Sbjct 39632 GACACCATTGACAACG-TGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCCCCGGACCA 39690
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 39691 GCAGCGTCTGATATTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCCGACTACAA 39750
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||||| |||
Sbjct 39751 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGT 39787
>seq11062
Length=46929
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | |
Sbjct 43709 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTCT 43768
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | ||||||| ||||| ||||| || || | |||||
Sbjct 43769 GACACAATCGACAATGTCAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 43828
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| ||||||| | ||| ||||| ||||| || || | ||||||||| |||||||||
Sbjct 43829 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACCCTTGCGGACTACAAC 43888
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| |||| ||| || || || |||||||| || ||||| || ||
Sbjct 43889 ATCCAGTAGGAGAGC-ACCCTCCACTTGGTGCTCCGCTTGAGGGGTGG 43935
>seq12070
Length=146516
Score = 125 bits (138), Expect = 7e-24
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||| || | || |||||| || |
Sbjct 66122 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATTACGCTTGAGGTCGAGTCCTCG 66063
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 66062 GACACGATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 66004
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | |||||||| ||||||||
Sbjct 66003 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAA 65944
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || || || |||||||
Sbjct 65943 CATCCAGAAGGAGTCCACTCTCCACCTGGTGCT 65911
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| |||||||| | || || ||| | |
Sbjct 65218 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAGGTGGAGTCATCT 65159
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || ||||| || ||| | |||||
Sbjct 65158 GACACCATCGACAACG-TGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCA 65100
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | || ||||| |||||||| || | |||||||| ||||||||
Sbjct 65099 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAA 65040
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| | || || || ||||||| ||| | | || ||||
Sbjct 65039 CATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGTCTCCGTGGTGGCC 64990
>seq11736
Length=148999
Score = 118 bits (130), Expect = 1e-21
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
||| | ||||| || || || || || ||||| ||||| |||||||| |||| ||||||
Sbjct 9770 AAACAGATGCAGATCTTTGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAG 9829
Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357
| | |||| | | | | |||| || |||| ||||| ||||| || ||| |
Sbjct 9830 AGCTCAGACACTATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCCCCG 9889
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
||||| ||| ||||||| | || ||||| || || || |||| |||||||| |||
Sbjct 9890 GACCAGCAGAGGCTCATCTTTGCTGGCAAGCAACTAGAGGACGGCCGCACCCTGGCTGAC 9949
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| || ||||| | || || || | || |||||| |||| || ||
Sbjct 9950 TACAACATTCAGAAGGAGTCTACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 10002
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || |||||||| |||| || ||| | ||
Sbjct 10004 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAGACCATCACTCTCGAGGTTGAGAGCTCC 10063
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || || | ||||| ||||| || ||| | |||||
Sbjct 10064 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 10123
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| ||||||| | || || || |||||||| || | |||||| | |||||||||
Sbjct 10124 CAGAGGCTCATCTTTGCTGGGAAGCAGCTGGAGGATGGGCGCACATTGGCTGACTACAAC 10183
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| || |||||| | || || ||| | || |||||| | || || ||
Sbjct 10184 ATTCAGAAGGAATCTACTCTTCATCTTGTCCTGCGTCTCAGGGGAGG 10230
>seq12004
Length=146743
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || |||||||| | || |||||| | |
Sbjct 145627 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACGCTGGAGGTCGAGTCGTCT 145686
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || || | |||||
Sbjct 145687 GACACCATTGACAACG-TGAAGGCGAAGATCCAAGACAAGGAGGGCATCCCACCAGACCA 145745
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | || || || ||||| || || | |||||||| ||||||||
Sbjct 145746 GCAGCGCCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTACAA 145805
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| |||||| | ||||| ||| |||| |||||
Sbjct 145806 CATCCAGAAGGAATCTACGCTCCATCTGGTCCTGCG 145841
>seq1832
Length=108017
Score = 105 bits (116), Expect = 7e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
|| || ||||| || || | ||| ||||| |||||||| |||||||||||||| ||||
Sbjct 384 GATCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGAGCGCACCCTGGCCGAC 443
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGCCGC 38477
||||||||||| ||||| ||||||||| ||||||| || | | ||||||||| ||
Sbjct 444 TACAACATCCAGAAGGAGTTGACGCTGCACCTGGTGCTCCGCCTACGTGGCGGCCGCGGC 503
Query 38478 A 38478
|
Sbjct 504 A 504
Score = 96.9 bits (106), Expect = 3e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
|||| ||||||||||| | ||| || || |||||||| |||| ||||||||| ||||
Sbjct 47645 GACCGTCAGCGGCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGGCGCACCCTGGCCGAC 47704
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||| |||||| ||||| |||||||||| ||||||| ||
Sbjct 47705 TACAGCATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCG 47745
>seq5775
Length=94323
Score = 104 bits (114), Expect = 2e-17
Identities = 94/116 (81%), Gaps = 3/116 (3%)
Strand=Plus/Plus
Query 38344 AGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402
||||| |||||||| |||| ||||||||||| | |||||| || |||||||| ||||
Sbjct 52662 AGGGA--TCCCGCCGGACCAGCAGCGGCTCATCTTCGCGGGGAAGCAGCTGGAGGACGGC 52719
Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| |||||||| |||||| ||||| | |||||||| ||||||| ||
Sbjct 52720 CGCACCCTGGCCGACTACAGCATCCAGAAGGATTCCACGCTGCACCTGGTGCTCCG 52775
Score = 102 bits (112), Expect = 8e-17
Identities = 96/121 (79%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409
|||||||| |||| ||||||||||||| ||| || || |||||||| |||| |||||||
Sbjct 42536 TCCCGCCGGACCAGCAGCGGCTCATTTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCC 42595
Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469
| ||||| |||||||| ||||| | |||||||| ||||||| || | ||||||
Sbjct 42596 TAGCGGACTATAACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGCCTCCGAGGCG 42655
Query 38470 G 38470
|
Sbjct 42656 G 42656
>seq2366
Length=105829
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/215 (70%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| || || |||||||| | || || ||| | |
Sbjct 75729 ATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATCACACTGGAGGTGGAGTCATCT 75788
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || ||| ||||| || || || ||| | |||||
Sbjct 75789 GACACCATCGACAATGTGAAGGCCAA--TCCAGGACAAGGATGGCATCCCC-CGGACCAG 75845
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
| ||| ||||| | | | ||||| ||||| || |||| |||||||| ||||||||||
Sbjct 75846 CGGCGCCTCATCTTCACCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCCGACTACAAC 75905
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||| | || || ||| | || || ||
Sbjct 75906 ATCCAAAAGGAGTCCACCCTCCATCTCGTTCTCCG 75940
>seq6651
Length=371268
Score = 86.0 bits (94), Expect = 6e-12
Identities = 87/111 (78%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 38346 GGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCG 38404
||||| ||||||| |||| ||||| || || | ||| || || |||||||| || | ||
Sbjct 148559 GGAAT-CCCGCCGGACCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAGGATGGCCG 148617
Query 38405 CACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||||||||||||||||||| | ||||| || | |||||
Sbjct 148618 CACCCTGGCCGACTACAACATCCAAAAGGAGTCCACGCTCCACCTCGTGCT 148668
>seq8356
Length=84350
Score = 82.4 bits (90), Expect = 8e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| || || || |||||| | || || ||| | ||
Sbjct 46708 ATGCAGATCTTTGTGAAGACCCTCACTGGGAAGACAATCACCCTTGAGGTGGAGTCATCC 46767
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | ||| || | || || ||||||||||| | || ||
Sbjct 46768 GACACAATTGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGAATTCCACCAGAGCAG 46827
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||| ||| || | || ||||| |||||||| || | |||||| | |||||||||
Sbjct 46828 CAGCAGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGGCGCACGATTGCTGACTACAAC 46887
Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446
|| || || || | || |||||
Sbjct 46888 ATTCAGAAAGAGTCCACCCTGCA 46910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500063787338240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |