Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq9737 105 3e-18 >seq9737 Length=173456 Score = 105 bits (116), Expect = 3e-18 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 26060 AAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACT 26119 || ||||||||||| || |||||||||||||| || || | ||||| ||||||||||| Sbjct 49251 AACCTACCTTTTCTCTTGCCTCCACCTTGATCAACATAACGGGCAGTATCATTGAAAACA 49310 Query 26120 TTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTC 26179 || ||| ||||| | ||| | ||| ||| ||||| | |||| | || || Sbjct 49311 CGCAGCATAGGAACAATTCCGTTAGAAGTTCCATTTGTTCCTCGAATGTAACTCCCAGTA 49370 Query 26180 GATCTAATATCGTGAGCATGA-ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA 26238 | || ||||| ||| | ||| | ||| ||||| ||||| |||| || | ||||| Sbjct 49371 GCTCGAATATTGTG-GATTGAGACACCAATTCCTCCAGCAGATTTGCTTATCACAGCACA 49429 Query 26239 ATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 || || | ||||| ||||||| | || |||||| ||||||| Sbjct 49430 TTCCGAGAGAGTATCATAAATTCCCTCAATACTATCATCTTTCAT 49474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252986228683700