Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016-
09-29] 17,436 sequences; 589,166,415 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq11736 116 3e-21
seq12936 107 2e-18
seq12320 105 6e-18
seq12070 105 6e-18
seq9352 105 6e-18
seq15625 100 3e-16
seq8841 100 3e-16
seq16592 98.7 9e-16
seq12004 98.7 9e-16
seq11548 96.9 3e-15
seq12418 91.5 1e-13
seq8356 91.5 1e-13
seq8693 87.8 2e-12
seq12880 86.0 6e-12
seq11062 86.0 6e-12
>seq11736
Length=148999
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || ||||| ||| | |
Sbjct 10231 GATGCAGATCTTTGTCAAGACACTGACTGGCAAGACCATCACCCTGGAAGTGGAAAGCTC 10290
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || ||||| |||||
Sbjct 10291 TGACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCTCCTGATCA 10350
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||| || || || ||||||||||| | | | | || ||||||| ||
Sbjct 10351 GCAGAGGCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGTACCTTGGCAGATTACAA 10410
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||||| |||||||| || || || | || |||| | ||||| |||
Sbjct 10411 CATTCAGAAGGAATCCACTCTTCATCTTGTCCTGCGCCTCCGCGGTGGC 10459
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || ||||| || || | ||
Sbjct 10004 ATGCAGATCTTCGTCAAGACTCTCACAGGGAAGACCATCACTCTCGAGGTTGAGAGCTCC 10063
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 10064 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 10123
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| ||||| |||||||||||| | | | || | || || |||
Sbjct 10124 CAGAGGCTCATCTTTGCTGGGAAGCAGCTGGAGGATGGGCGCACATTGGCTGACTACAAC 10183
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||| |||||||| || || || ||||
Sbjct 10184 ATTCAGAAGGAATCTACTCTTCATCTTG 10211
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || || || || || || ||||| || || | |
Sbjct 9775 GATGCAGATCTTTGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGAGCTC 9834
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| |||||||| ||||| || || || || || || ||
Sbjct 9835 AGACACTATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 9894
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || || || || ||||| | | | || | || || ||
Sbjct 9895 GCAGAGGCTCATCTTTGCTGGCAAGCAACTAGAGGACGGCCGCACCCTGGCTGACTACAA 9954
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||||| ||||| || || || ||| | || ||||
Sbjct 9955 CATTCAGAAGGAGTCTACCCTCCACCTTGTCCTGCG 9990
>seq12936
Length=140512
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || ||||| || || || || || | |
Sbjct 39097 GATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 39038
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||| || ||||| |||||||| ||||| || ||
Sbjct 39037 TGACACGATTGACAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCAGACCA 38978
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||| | ||||| || || || ||||| ||||| | | | | ||||||| ||
Sbjct 38977 GCAACGCCTTATCTTCGCTGGCAAGCAGCTCGAGGACGGGCGTACGCTTGCAGATTACAA 38918
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||||||||||| || || | ||| | || | || | || ||||||
Sbjct 38917 CATTCAAAAGGAGTCCACCTTGCACCTTGTCCTCCGTCTACGTGGAGGC 38869
Score = 89.7 bits (98), Expect = 5e-13
Identities = 146/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || ||||| ||||| || || || || | || || || | |
Sbjct 38641 GATGCAGATCTTCGTGAAGACGCTCACCGGCAAGACCATCACTTTGGAGGTCGAGTCTTC 38582
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 38581 AGACACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 38522
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | || |||||||| || ||||| ||||| | | | | || | ||||| ||
Sbjct 38521 GCAGCGCCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACCCTGGCGGATTACAA 38462
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
||| || |||||||| || || || ||||
Sbjct 38461 CATCCAGAAGGAATCCACCCTCCATCTTG 38433
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || ||||| || || | |
Sbjct 33939 GATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCATC 33880
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | | || |||| | || ||||| ||||| | || || |||||
Sbjct 33879 TGACACTATTGACAATGCCAAGGCAAAGGTTCAGGACAAGGAAGGGGTTCCCCCTGATCA 33820
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGT-CAGATTATA 24881
|| || || |||| || || || ||||| ||||||| | | || | | | |||| |
Sbjct 33819 GCAGCGACTGTTCTTCGCTGGCAAGCAGCTCGAGGATT-GCCACACGTTTGCTAATTACA 33761
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||||| ||||| || || || ||| | || |||||
Sbjct 33760 GCATTCAGAAGGAGTCCACCCTGCACCTTGTCTTGCG 33724
>seq12320
Length=36718
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || ||||| || || || || || ||||| || || || || |
Sbjct 5148 GATGCAGATCTTCGTGAAGACGCTCACGGGCAAGACGATCACGCTGGAGGTGGAGGCGTC 5207
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || || || ||| | || ||||| || || || || || || ||
Sbjct 5208 GGACACGGTGGCAAACGTGAAGGCCAAGGTGCAGGACAAGGAGGGGATCCCGCCGGACCA 5267
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| || ||||| ||||||||||| | | | || | || || ||
Sbjct 5268 GCAGCGGCTCATCTTCGCGGGGAAGCAGCTGGAGGACGAGCGCACGCTGGCCGACTACAA 5327
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| || ||||| ||||| || ||| ||||| | || | ||||| |||||
Sbjct 5328 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCGG 5378
>seq12070
Length=146516
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || |||||||| || || || || |
Sbjct 66123 GATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATTACGCTTGAGGTCGAGTCCTC 66064
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 66063 GGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 66004
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| || || || |||||||||||| | | | || | || || ||
Sbjct 66003 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAA 65944
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| || || || ||| |||||
Sbjct 65943 CATCCAGAAGGAGTCCACTCTCCACCTGGTG 65913
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || | || || || | |
Sbjct 65218 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAGGTGGAGTCATCT 65159
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || || || || ||
Sbjct 65158 GACACCATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAG 65099
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || |||||||||||| | | | || | || || |||
Sbjct 65098 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAAC 65039
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| ||||| | || | || || |||
Sbjct 65038 ATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGTCTCCGTGGTGGC 64991
>seq9352
Length=67289
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| |||| || || ||||| || || || || ||||| || || || |
Sbjct 47606 GATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 47547
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| ||||| || || || || ||
Sbjct 47546 GGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 47487
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || || ||||| ||||| | | | | | || || ||
Sbjct 47486 GCAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCGCTGACTACAA 47427
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || |||||||| || || ||| ||||| |||| |||| || ||
Sbjct 47426 CATCCAGAAGGAATCCACCCTCCACCTGGTGCTGCGTCTGCGTGGTGG 47379
>seq15625
Length=123999
Score = 100 bits (110), Expect = 3e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || ||||| || || || || || || || || || || ||
Sbjct 106656 GATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACCCTGGAGGTGGAGAGCAG 106715
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| |||||||| || || || || || ||
Sbjct 106716 CGACACCATCGACAACGTCAAGGGCAAGATCCAGGACAAAGAGGGCATCCCGCCGGACCA 106775
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTA 24879
|| || | ||||| ||||| || ||||| ||||| || | ||| | | || ||
Sbjct 106776 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGA--CG-GCCACACGCTCGCCGACTA 106832
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| || ||||| ||||| || ||| ||||| |||| | ||||| |||
Sbjct 106833 CAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTCCGCGGCGGC 106884
>seq8841
Length=75027
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || ||||| || || || || |
Sbjct 23660 GATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTC 23601
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 23600 GGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCGGACCA 23541
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| ||||| || ||||| ||||| | | | | | || || ||
Sbjct 23540 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 23481
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| ||||| || ||| ||||| | || | ||||||||
Sbjct 23480 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGAGG 23433
>seq16592
Length=119134
Score = 98.7 bits (108), Expect = 9e-16
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || ||||| || || || || ||||| || || || |
Sbjct 52501 GATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTC 52560
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 52561 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 52620
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| || ||||||| ||||| || ||||||||||||
Sbjct 52621 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAT 52657
>seq12004
Length=146743
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | ||||| || || || || || || || || | |
Sbjct 145399 ATGCAGATCTTTGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAGGTGGAGTCGTCT 145458
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 145459 GATACAATCGATAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATCCCGCCGGACCAG 145518
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
|| || | ||||| ||||| || ||||||||||| ||| | || | | |||||||
Sbjct 145519 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCG-CACAC-TCGCGGATTATA 145576
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||| || ||||| || || || ||||||||| | || | || || |||
Sbjct 145577 ACATACAGAAGGAGTCCACCCTGCACTTGGTGCTCCGTCTCCGTGGTGGC 145626
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || ||||| || || || | |
Sbjct 145627 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACGCTGGAGGTCGAGTCGTCT 145686
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 145687 GACACCATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAG 145746
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | |||||||| || || ||||| |||||| | | | || | || || |||
Sbjct 145747 CAGCGCCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTACAAC 145806
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || |||||||| || || || |||| |||| | || || |||
Sbjct 145807 ATCCAGAAGGAATCTACGCTCCATCTGGTCCTGCGCCTCCGTGGTGGC 145854
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || || || || || || |
Sbjct 145171 ATGCAGATCTTTGTGAAGACCTTGACTGGAAAGACCATCACACTAGAGGTTGAGTCCTCA 145230
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 145231 GACACAATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAG 145290
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || ||||| ||||| |||||| | | | | | || || |||
Sbjct 145291 CAGCGTCTCATCTTCGCGGGGAAGCAGCTTGAGGATGGTCGCACCTTAGCTGACTACAAC 145350
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| || || || || || ||| | ||| | || || | ||||||
Sbjct 145351 ATTCAGAAAGAGTCCACCCTTCACCTTGTGCTCAGACTGAGGGGAGGC 145398
>seq11548
Length=265335
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || | || || || || || || || || || || | |
Sbjct 39571 GATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAGAGCTC 39630
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|||||| | || |||| || | ||| ||||| ||||| || || || || || || |
Sbjct 39631 CGACACCATTGACAACGTGAAGGCCAAA-ATCCAGGACAAGGAGGGCATCCCCCCGGACC 39689
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||| |||||||| || |||||||||||| | | | | | || || |
Sbjct 39690 AGCAGCGTCTGATATTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCCGACTACA 39749
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| || || || ||| |||||
Sbjct 39750 ACATCCAGAAGGAGTCCACCCTCCACCTGGTG 39781
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || ||||| || || || || ||||| || || | |
Sbjct 38647 GATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTC 38706
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || ||||| || ||
Sbjct 38707 TGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 38766
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| ||||| || ||||| |||||| | | | | | || || ||
Sbjct 38767 GCAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACGCTTGCTGACTACAA 38826
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| || || ||| |||||
Sbjct 38827 CATCCAGAAGGAGAGCACCCTCCACCTGGTG 38857
>seq12418
Length=36051
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/206 (71%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || ||||| || || || |
Sbjct 34004 GATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 33945
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || | || || ||||||| | ||||| || || || | || |||||
Sbjct 33944 GGATACAATTGACAATGTCAAGGCAAAGATCTAGGACAAGGAGGGGATCCAACCGGATCA 33885
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG-AGAAACATGTCAGATTATA 24881
|| || ||||||||||||| || ||||| ||||| | || |||| | || || |
Sbjct 33884 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGGCGGACGCATG-CTGACTA-A 33827
Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907
|||| || ||||| || || || |||
Sbjct 33826 ACATCCAGAAGGAGTCTACCCTCCAC 33801
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| || || || || | || ||||| ||| | ||||||||||||||
Sbjct 33466 AAGATTCAGGACAAGGAGGGCATTCCACTGGACCAACAGCGTCTCATCTTTGCCGGGAAG 33407
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| | | | || | ||||| |||||||| || || || || || |||
Sbjct 33406 CAGCTTGAGGATGGCCGCACCTTGGCTGATTACAACATTCAGAAAGAGTCCACCCTTCAC 33347
Query 24908 TTGGTGTTGCGATTGCGCGGAGGC 24931
| ||| | || || | ||||||
Sbjct 33346 CTTGTGCTCAGACTGAGGGGAGGC 33323
>seq8356
Length=84350
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || || || || | |
Sbjct 46707 GATGCAGATCTTTGTGAAGACCCTCACTGGGAAGACAATCACCCTTGAGGTGGAGTCATC 46766
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||||| | || | || || |||||| || || || || ||||| || || || ||
Sbjct 46767 CGACACAATTGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGAATTCCACCAGAGCA 46826
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || || |||||||||||| | | | || | || || ||
Sbjct 46827 GCAGCAGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGGCGCACGATTGCTGACTACAA 46886
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
|||||| || || || || || |||
Sbjct 46887 CATTCAGAAAGAGTCCACCCTGCAC 46911
>seq8693
Length=192112
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853
|| ||||| ||||| || ||||| |||||||| ||| |||| || || || || ||||||
Sbjct 111169 CAGGACAAGGAAGGGATTCCTCCGGATCAACAGCGTCTGATATTCGCTGGCAAGCAGCTG 111228
Query 24854 GAGGATTCGAGAAACA-TGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| | || ||| || | || || |||||||| ||||| || || || ||||||||
Sbjct 111229 GAGGA-TGGACGCACACTGGCTGACTACAACATTCAGAAGGAGTCAACTCTCCACTTGGT 111287
>seq12880
Length=140709
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || ||| | || || || || |
Sbjct 19038 GATGCAGATCTTCGTGAAGACCCTGACGGGAAAGACCATCACGTTGGAGGTGGAGTCCTC 18979
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| ||||| || || || || || || || || || ||
Sbjct 18978 GGACACCATCGACAACGTGAAAGCCAAGATTCAGGATAAGGAGGGCATCCCGCCGGACCA 18919
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| ||||| || ||||| ||||| | | | | | || || ||
Sbjct 18918 GCAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 18859
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||| || ||||| || ||||| ||| ||||| | || | ||||| ||||
Sbjct 18858 CATCCAGAAGGAGTCCACACTCCACCTGGTGCTCCGCCTCCGCGGTGGCG 18809
>seq11062
Length=46929
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/212 (69%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || | || || || || || || || || || || || |
Sbjct 43936 GATGCAGATCTTTGTGAAGATCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTT 43995
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || ||||| || ||
Sbjct 43996 TGACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 44055
Query 24823 ACAACGTTTGATCTTT-GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
||| ||| |||| ||| ||||| || |||||||||||| | | | | | || | |
Sbjct 44056 ACATCGTCTGATTTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCTGACGACA 44115
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| || || || ||| |||||
Sbjct 44116 ACATCCAGAAGGAGTCCACCCTCCACCTGGTG 44147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449799544818080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |