Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq16036 93.3 1e-13 >seq16036 Length=121796 Score = 93.3 bits (102), Expect = 1e-13 Identities = 175/248 (71%), Gaps = 12/248 (5%) Strand=Plus/Plus Query 72166 GTTACTTTGCCAAACACAACGTGTTTGTTATTTAAATGTGGTTGA--GGTGCAAGTGTAA 72223 || ||| | ||||| ||||||||||| || |||||| ||| |||| |||| | Sbjct 73764 GTCACTCTCCCAAAAACAACGTGTTTCCCATCTAAATGAGGTGTCCTGGTGGTAGTG--A 73821 Query 72224 TGAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTG-CT 72282 |||| || || || ||||| |||||||| || |||||||| |||| || ||| | Sbjct 73822 TGAAAAACTGAGAACCATTTGTGTCAGGACCAGAATTAGCCATTGAAAGCATTCCTTTCC 73881 Query 72283 TCTGAATGCTTTAATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATAT--ACTTTGAC 72340 ||| | |||||||| | ||||||||||| ||||| | ||||| || ||| | | Sbjct 73882 TCTCA-TGCTTTAAAACAAAATTCTCATCCTCAAATTTGGACCCATAAATTGACTCT--C 73938 Query 72341 CTGAGCTTCCATCAA-AGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTACT 72399 || |||||||| || || |||| || |||||||||||||| ||||| || Sbjct 73939 CTCCTGTTCCATCACCAGCAGTCA-TATCTCCACCTTGAACCATAAACCCTTTAATAACG 73997 Query 72400 CTATGGAA 72407 | |||||| Sbjct 73998 CGATGGAA 74005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186547667503996