Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq32078 109 1e-18 seq5413 107 4e-18 seq7765 105 1e-17 seq9629 104 5e-17 seq6694 104 5e-17 seq1603 104 5e-17 seq1071 104 5e-17 seq689 104 5e-17 seq83 104 5e-17 seq6 104 5e-17 seq3 104 5e-17 seq1448 100 6e-16 seq13460 98.7 2e-15 seq11799 98.7 2e-15 seq4323 98.7 2e-15 seq2082 98.7 2e-15 seq1404 98.7 2e-15 seq687 98.7 2e-15 seq258 98.7 2e-15 seq2656 86.0 1e-11 >seq32078 Length=1569 Score = 109 bits (120), Expect = 1e-18 Identities = 306/460 (67%), Gaps = 16/460 (3%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || ||||||||||| ||||||||| | || || || ||||| | || ||||| Sbjct 985 TCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCC 1044 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 || ||| ||||||| ||||| ||| || | |||||||| ||| | || ||| Sbjct 1045 TTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTCACCTTCTCCAAC 1104 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| ||||| || |||||||||||||| | |||| | || | || | Sbjct 1105 GAGCTCATCTCCCGTGACGAGGGTCTCCACTGCGACTTCGCCTGCCTCCTCTAC---AGC 1161 Query 230350 CTCCAGAACAAGCTACCATT---CGAG---ACGGTCAAACAAATCATTACAGAAGCAGTT 230403 |||| |||||| | | ||| |||| | || || ||| | ||| || || Sbjct 1162 CTCCTGAACAA-CAA--ATTGCCCGAGGAAAAAGTGAAGTCCATCGTGGAAGACGCCGTC 1218 Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGC 230462 || | |||| ||| ||| | |||||||| | ||| || || || | |||||||||| Sbjct 1219 GATATCGAACGGGAATTCGTGTGTGACGCGTTGCCA-GTTGCACTGGTGGGCATGAACGG 1277 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 | || ||| | |||||||| |||||||| |||||||| | | | || ||||| || Sbjct 1278 GGTTCTGATGAGCCAGTACATTGAATTCGTGGCCGACCGGTTGATGATGGCTCTTGGCTA 1337 Query 230523 CGAGAAAG-TGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAG 230581 | || ||| | || | | ||| || |||| | ||||||||||| ||| | || | Sbjct 1338 C-AGCAAGATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGG 1396 Query 230582 GGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621 |||| || || ||||| || || | ||| | || || || Sbjct 1397 GGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTACCA 1436 >seq5413 Length=38329 Score = 107 bits (118), Expect = 4e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||||||||||||||||||||||||| || || |||| || |||||||||||||||| Sbjct 1518 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 1459 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 1458 GCCCCACGGTGGGC 1445 >seq7765 Length=42474 Score = 105 bits (116), Expect = 1e-17 Identities = 305/460 (66%), Gaps = 16/460 (3%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || ||||||||||| ||||||||| | || || || ||||| | || ||||| Sbjct 40198 TCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCC 40139 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 || ||| ||||||| ||||| ||| || | |||||||| ||| | || ||| Sbjct 40138 TTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTCACCTTCTCCAAC 40079 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| ||||| || |||||||| ||||| | |||| | || | || | Sbjct 40078 GAGCTCATCTCCCGTGACGAGGGACTCCACTGCGACTTCGCCTGCCTCCTCTAC---AGC 40022 Query 230350 CTCCAGAACAAGCTACCATT---CGAG---ACGGTCAAACAAATCATTACAGAAGCAGTT 230403 |||| |||||| | | ||| |||| | || || ||| | ||| || || Sbjct 40021 CTCCTGAACAA-CAA--ATTGCCCGAGGAAAAAGTGAAGTCCATCGTGGAAGACGCCGTC 39965 Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGC 230462 || | |||| ||| ||| | |||||||| | ||| || || || | |||||||||| Sbjct 39964 GATATCGAACGGGAATTCGTGTGTGACGCGTTGCCA-GTTGCACTGGTGGGCATGAACGG 39906 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 | || ||| | |||||||| |||||||| |||||||| | | | || ||||| || Sbjct 39905 GGTTCTGATGAGCCAGTACATTGAATTCGTGGCCGACCGGTTGATGATGGCTCTTGGCTA 39846 Query 230523 CGAGAAAG-TGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAG 230581 | || ||| | || | | ||| || |||| | ||||||||||| ||| | || | Sbjct 39845 C-AGCAAGATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGG 39787 Query 230582 GGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621 |||| || || ||||| || || | ||| | || || || Sbjct 39786 GGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTACCA 39747 >seq9629 Length=18248 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 9824 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9765 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9764 CCCACGGTGGGC 9753 >seq6694 Length=24671 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 22858 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22917 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22918 CCCACGGTGGGC 22929 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 21049 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 21108 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 21109 CCCACGGTGGGC 21120 >seq1603 Length=52923 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 9568 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9509 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9508 CCCACGGTGGGC 9497 >seq1071 Length=63046 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 39048 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 39107 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 39108 CCCACGGTGGGC 39119 >seq689 Length=74106 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 33108 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 33049 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 33048 CCCACGGTGGGC 33037 >seq83 Length=126614 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 3350 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3409 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3410 CCCACGGTGGGC 3421 >seq6 Length=202382 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 59574 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 59515 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 59514 CCCACGGTGGGC 59503 >seq3 Length=218374 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 152605 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 152664 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 152665 CCCACGGTGGGC 152676 >seq1448 Length=55459 Score = 100 bits (110), Expect = 6e-16 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 ||||||||||||||||||||||||| || || |||| || |||||||||||||||||||| Sbjct 15904 CCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCC 15963 Query 165772 CACGATGGGC 165781 |||| ||||| Sbjct 15964 CACGGTGGGC 15973 >seq13460 Length=12559 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || ||||||||| |||||||| Sbjct 7672 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGTGTTCGAGC 7613 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7612 CCCACGGTGGGC 7601 >seq11799 Length=14741 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 14383 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 14442 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 14443 CCCACGGTGGGC 14454 >seq4323 Length=32935 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 25354 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 25413 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 25414 CCCACGGTGGGC 25425 >seq2082 Length=47294 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 23080 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 23021 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 23020 CCCACGGTGGGC 23009 >seq1404 Length=56136 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 18677 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18618 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 18617 CCCACGGTGGGC 18606 >seq687 Length=139362 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 139070 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 139129 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 139130 CCCACGGTGGGC 139141 >seq258 Length=97970 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 30604 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 30663 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 30664 CCCACGGTGGGC 30675 >seq2656 Length=42395 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| |||||| || ||| |||| || ||||| | |||||||||||||| ||| Sbjct 42248 TCTGCATGTTCCCGATAACATACCCCGTGATCTGGGAGTTCTACAAGAAGGCGGTAGCAT 42189 Query 229811 CTTTCTGGACCACTGAGGAAGT--TCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAA 229868 |||||||||| || || ||||| ||||| || ||| ||| | |||||| | Sbjct 42188 CTTTCTGGACGACGGAAGAAGTCGACCTCT--CCGGCGACCTCGGCCACTGGCTCAACTC 42131 Query 229869 ACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGA 229928 || | |||||||| || || |||||| ||| |||| | || ||||| | |||||| Sbjct 42130 CCTGACGGACGACGATCGCCACTTCATCTCCCACGTCCTCGCCTTCTTCGCCGCCTCCGA 42071 Query 229929 TGGTATTGT 229937 || || || Sbjct 42070 CGGCATCGT 42062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057277988936180