Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2510 100 3e-16 seq7765 91.5 2e-13 seq32078 86.0 6e-12 >seq2510 Length=43382 Score = 100 bits (110), Expect = 3e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || ||||||||||| || ||||| ||||| | | ||| || |||||||| || ||| Sbjct 21245 AGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTT 21186 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| ||||| ||||| | |||||| || | |||| || || || || || Sbjct 21185 AGCCCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAGAT-GGAGCAGAAGGAGCCGGAGAA 21127 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| |||||||| || | ||||| |||| Sbjct 21126 GAAGATACCCTCGACGCAGGCAAAGGCGA 21098 >seq7765 Length=42474 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || ||||||||||| || ||||| ||||| | | ||| || |||||||| || || Sbjct 40032 AGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTG 40091 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC-AAATGACCCCGAAAA 16317 | ||| ||||| || || ||||| | |||||| || | ||| ||| || || || || Sbjct 40092 AGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGAT-GGAGCAAAAGGAGCCGGAGAA 40150 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| |||||||| || | ||||| |||| Sbjct 40151 GAAGATACCCTCGACGCAGGCAAAGGCGA 40179 >seq32078 Length=1569 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || ||||||||||| || || || ||||| | | ||| || |||||||| || || Sbjct 1151 AGGCAGGCGAAGTCGCAGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTG 1092 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC-AAATGACCCCGAAAA 16317 | ||| ||||| || || ||||| | |||||| || | ||| ||| || || || || Sbjct 1091 AGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGAT-GGAGCAAAAGGAGCCGGAGAA 1033 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| |||||||| || | ||||| |||| Sbjct 1032 GAAGATACCCTCGACGCAGGCAAAGGCGA 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511156864493520