Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 100 3e-16
seq7765 91.5 2e-13
seq32078 86.0 6e-12
>seq2510
Length=43382
Score = 100 bits (110), Expect = 3e-16
Identities = 113/149 (76%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || ||||||||||| || ||||| ||||| | | ||| || |||||||| || |||
Sbjct 21245 AGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTT 21186
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317
| ||| ||||| ||||| ||||| | |||||| || | |||| || || || || ||
Sbjct 21185 AGCCCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAGAT-GGAGCAGAAGGAGCCGGAGAA 21127
Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346
||| |||||||| || | ||||| ||||
Sbjct 21126 GAAGATACCCTCGACGCAGGCAAAGGCGA 21098
>seq7765
Length=42474
Score = 91.5 bits (100), Expect = 2e-13
Identities = 111/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || ||||||||||| || ||||| ||||| | | ||| || |||||||| || ||
Sbjct 40032 AGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTG 40091
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC-AAATGACCCCGAAAA 16317
| ||| ||||| || || ||||| | |||||| || | ||| ||| || || || ||
Sbjct 40092 AGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGAT-GGAGCAAAAGGAGCCGGAGAA 40150
Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346
||| |||||||| || | ||||| ||||
Sbjct 40151 GAAGATACCCTCGACGCAGGCAAAGGCGA 40179
>seq32078
Length=1569
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || ||||||||||| || || || ||||| | | ||| || |||||||| || ||
Sbjct 1151 AGGCAGGCGAAGTCGCAGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTG 1092
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC-AAATGACCCCGAAAA 16317
| ||| ||||| || || ||||| | |||||| || | ||| ||| || || || ||
Sbjct 1091 AGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGAT-GGAGCAAAAGGAGCCGGAGAA 1033
Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346
||| |||||||| || | ||||| ||||
Sbjct 1032 GAAGATACCCTCGACGCAGGCAAAGGCGA 1004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511156864493520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |