Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq490 84.2 2e-11 seq2385 82.4 6e-11 >seq490 Length=81643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| |||||| |||| || |||| ||||| ||||| ||| || ||| | || Sbjct 59514 ATGCAGATATTCGTCAAGACTCTGACTGGCAAGACCATAACCCTTGAGGTTGAATCTTCA 59573 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| ||||||| || ||||| || | || ||| ||| Sbjct 59574 GACACCATTGACAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 59633 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || || ||||||||||| || || | || ||| || | || || |||||| Sbjct 59634 CAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGGCGCACCCTAGCAGACTACAAT 59693 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||||||||| || || || || |||| Sbjct 59694 ATTCAAAAGGAGTCAACCCTGCATCTGGT 59722 >seq2385 Length=44452 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | || || |||| |||||||| || ||| || || | | Sbjct 34422 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34481 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| ||| ||| ||||| || || | || |||||| Sbjct 34482 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 34541 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || ||||||||||| || ||||| ||||||||| ||| | || |||||||| Sbjct 34542 CAGAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAAC 34601 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 || || ||||||||||| ||||| Sbjct 34602 ATCCAGAAGGAATCTACGCTTCA 34624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410595104676404