Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3117 100 4e-16 >seq3117 Length=39173 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || || |||||||||||| || | ||||| ||| |||||| || || | ||||||| Sbjct 13840 TCAAATTCGTCTCCCCAACAATCAGCCAATCCTGGAGCTTCATTAGGGCAAAACAATGAC 13899 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || | |||| ||| | || | || ||| ||||| || ||||||||||| || | |||| Sbjct 13900 CATTGACCATTATCCTGAACCCTTTGCATGAAGAGGTCGGGAATCCAAAGTGCAAAAAAT 13959 Query 72064 AGATCTCTGGTTCTATGCTCCTC 72086 ||||| || | ||||||||| || Sbjct 13960 AGATCCCTTGCTCTATGCTCTTC 13982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670801231077360