Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2385 82.4 6e-11 >seq2385 Length=44452 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || || || |||||||| || || | | | || || | |||| Sbjct 34017 TGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAGTTGT 33958 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 |||||||| | |||| ||| || ||||| |||||||| || ||||| ||||||| Sbjct 33957 TTGCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATTTTG 33898 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || |||||| || || || | || ||||| || || ||| Sbjct 33897 GCCTTAACATTGTCGATTGTATCGGATGACTCGACCTCAAGAGTGATGGTCTTCCCGGTC 33838 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | || |||||||| |||||||| Sbjct 33837 AATGTCTTTACAAAGATTTGCAT 33815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362001375219126