Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 82.4 6e-11
>seq2385
Length=44452
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| || || || || || || |||||||| || || | | | || || | ||||
Sbjct 34017 TGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAGTTGT 33958
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|||||||| | |||| ||| || ||||| |||||||| || ||||| |||||||
Sbjct 33957 TTGCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATTTTG 33898
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || || |||||| || || || | || ||||| || || |||
Sbjct 33897 GCCTTAACATTGTCGATTGTATCGGATGACTCGACCTCAAGAGTGATGGTCTTCCCGGTC 33838
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
| || |||||||| ||||||||
Sbjct 33837 AATGTCTTTACAAAGATTTGCAT 33815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362001375219126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |