Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq490 84.2 2e-11 >seq490 Length=81643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 43919 TGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGT 43978 || |||||| ||| |||||||| || || || | || |||| |||||||| Sbjct 58804 TGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGACCATCCTCCAATTGC 58745 Query 43979 TTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTT 44038 || |||||||| |||| || ||||||||| | || | || || || || || || Sbjct 58744 TTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTG 58685 Query 44039 TGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTT 44098 ||||| | ||| |||||||| | ||| || || | || ||||| || || || Sbjct 58684 GCCTTGACATTGTCAATAGTATCTGAAGACTCAACCTCAAGAGTGATTGTCTTGCCTGTC 58625 Query 44099 AAAGTCTTCACAAATATTTGCATG 44122 || ||||||||||| || |||||| Sbjct 58624 AAGGTCTTCACAAAGATCTGCATG 58601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354603409298328