Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq527 125 4e-24 seq2251 122 5e-23 seq9944 114 7e-21 seq1303 113 2e-20 seq14253 111 8e-20 seq11935 111 8e-20 seq426 111 8e-20 seq9537 109 3e-19 seq4000 109 3e-19 seq3612 109 3e-19 seq842 109 3e-19 seq13892 107 1e-18 seq2095 107 1e-18 seq568 107 1e-18 seq118 107 1e-18 seq4732 105 3e-18 seq684 105 3e-18 seq236 105 3e-18 seq430 104 1e-17 seq872 96.9 2e-15 seq36932 84.2 1e-11 >seq527 Length=80275 Score = 125 bits (138), Expect = 4e-24 Identities = 83/93 (89%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||| |||||||| |||||||||||| | | |||||||| ||||||||||||||||| Sbjct 72905 AATTATTAAAAAATTTAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 72964 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 72965 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 72997 >seq2251 Length=45534 Score = 122 bits (134), Expect = 5e-23 Identities = 84/95 (88%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 11437 AATTAATAA--AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 ||||||||| |||| ||||||||||||| | | |||||||| ||||||||||||||| Sbjct 21208 AATTAATAATAAAAAAAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTAT 21267 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| ||||||||||||||| |||| Sbjct 21268 TAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 21302 >seq9944 Length=17656 Score = 114 bits (126), Expect = 7e-21 Identities = 83/97 (86%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| | ||||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 10850 AAAAACTTATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 10909 Query 11506 TCTRACCAACTGAGCTAATGGGCCGTCGACGATTGTG 11542 ||| ||||||||||||||| |||||| || ||||| Sbjct 10910 TCTAACCAACTGAGCTAATAGGCCGTTGATATTTGTG 10946 >seq1303 Length=70394 Score = 113 bits (124), Expect = 2e-20 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| | | ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 44842 AATAAAAAAAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 44783 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 44782 GACGCTCTAACCAACTGAGCTAATAGGCC 44754 >seq14253 Length=11605 Score = 111 bits (122), Expect = 8e-20 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| || ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 1504 AAAAATTAAGATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 1445 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||| |||| Sbjct 1444 CTCTAACCAACTGAGCTAATAGGCC 1420 >seq11935 Length=14554 Score = 111 bits (122), Expect = 8e-20 Identities = 85/101 (84%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||||||||| || | |||| | ||||||||| | | |||||||| ||||||||| Sbjct 3628 AAATATAGAAGAAAAAGAAAAAC----TGGCCCATGCAGGTCTCGAACCTGCGACCTTCG 3573 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| ||||||||||||||| |||| Sbjct 3572 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 3532 >seq426 Length=84326 Score = 111 bits (122), Expect = 8e-20 Identities = 81/94 (86%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 |||| ||||||| ||| ||||||||| | | |||||||| |||||||||||||||| Sbjct 17717 TTAAAAAAAAATAAAAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 17658 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||||||||||||| |||| Sbjct 17657 AGCACGACGCTCTAACCAACTGAGCTAATAGGCC 17624 >seq9537 Length=18417 Score = 109 bits (120), Expect = 3e-19 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 12761 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 12820 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||||| ||||| Sbjct 12821 CAACTGAGCTAATAGGCCG 12839 >seq4000 Length=34451 Score = 109 bits (120), Expect = 3e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||| | ||| ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 34144 AATAAAGGAAAAAAATGGCCCATGCAGGTCTCGAACCTACGACCTTCGCGTTATTAGCAC 34085 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 34084 GACGCTCTAACCAACTGAGCTAATAGGCC 34056 >seq3612 Length=36504 Score = 109 bits (120), Expect = 3e-19 Identities = 80/93 (86%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||| ||||| | ||| ||||||||| | | |||||||| |||||||||||||||||| Sbjct 30797 TAAAAAAAATTTTAATAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAG 30738 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||| ||||||||||||||| ||||| Sbjct 30737 CACGACGCTCTAACCAACTGAGCTAATAGGCCG 30705 >seq842 Length=73005 Score = 109 bits (120), Expect = 3e-19 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 28009 TAAAAAAATAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 28068 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 28069 CGCTCTAACCAACTGAGCTAATAGGCC 28095 >seq13892 Length=15408 Score = 107 bits (118), Expect = 1e-18 Identities = 78/90 (87%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||| ||| | |||| ||||||||| | | |||||||| |||||||||||||||||||| Sbjct 10042 AATTAAAGAAAAAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 9983 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| ||||||||||||||| |||| Sbjct 9982 CGACGCTCTAACCAACTGAGCTAATAGGCC 9953 >seq2095 Length=48193 Score = 107 bits (118), Expect = 1e-18 Identities = 79/91 (87%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 11443 TAAAAAATCA-AATT---GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||||||| | |||| |||||||| | | |||||||| ||||||||||||||||||| Sbjct 18647 TAAAAAATAACAATTTATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 18706 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 18707 ACGACGCTCTAACCAACTGAGCTAATAGGCC 18737 >seq568 Length=80565 Score = 107 bits (118), Expect = 1e-18 Identities = 78/91 (86%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 11443 TAAAAAATCAA----ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||| ||| ||||||||||| | | |||||||| ||||||||||||||||||| Sbjct 65874 TAAAAAAACAACATTATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 65815 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 | |||||||| ||||||||||||||| |||| Sbjct 65814 AAGACGCTCTAACCAACTGAGCTAATAGGCC 65784 >seq118 Length=116217 Score = 107 bits (118), Expect = 1e-18 Identities = 73/82 (89%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 |||||| ||||||||| | | |||||||| |||||||||||||||||||||||||||| Sbjct 95015 AATCAA--TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTC 95072 Query 11508 TRACCAACTGAGCTAATGGGCC 11529 | ||||||||||||||| |||| Sbjct 95073 TAACCAACTGAGCTAATAGGCC 95094 Score = 100 bits (110), Expect = 1e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 91944 AAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 92003 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||| ||| |||| Sbjct 92004 AACTGAGCCAATAGGCC 92020 >seq4732 Length=31119 Score = 105 bits (116), Expect = 3e-18 Identities = 87/104 (84%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 || ||| |||| | |||| || |||||| | | |||||||| |||||||||||||||| Sbjct 6023 AAGTAAAAAAACAACAAAAATGACCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 6082 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGATT 11539 ||||||||||||| ||||||||||||||| |||| ||||||| Sbjct 6083 AGCACGACGCTCTAACCAACTGAGCTAATAGGCC-AGGACGATT 6125 >seq684 Length=101651 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 9587 AAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 9646 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||||| |||| Sbjct 9647 AACTGAGCTAATAGGCC 9663 >seq236 Length=99714 Score = 105 bits (116), Expect = 3e-18 Identities = 71/79 (90%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| | Sbjct 28233 AAATGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAA 28292 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 28293 CCAACTGAGCTAATAGGCC 28311 >seq430 Length=84203 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 65524 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 65583 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 65584 TGAGCTAATAGGCC 65597 >seq872 Length=68093 Score = 96.9 bits (106), Expect = 2e-15 Identities = 88/111 (79%), Gaps = 7/111 (6%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | |||| |||| | | |||||||| |||||||||||||||||||||||| Sbjct 50782 AAAAAATTAT-TTGGGACATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 50724 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTCGACGATTGTGATTTTTCATCTA 11554 ||||| ||||||||||| ||| |||| | ||||| ||||| |||| Sbjct 50723 GCTCTAACCAACTGAGCAAATAGGCCAT------TTGTGTTTTTTTTTCTA 50679 >seq36932 Length=1187 Score = 84.2 bits (92), Expect = 1e-11 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 1187 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 1138 Lambda K H 0.637 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261362811579736