Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq220 96.9 3e-15 seq5010 95.1 1e-14 seq2385 95.1 1e-14 seq490 86.0 6e-12 seq2468 82.4 7e-11 >seq220 Length=196394 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAAA 26827 ||||| | ||||| || || | ||||| || |||||||| |||| | || | | | Sbjct 149226 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTTGAGAGCTCA 149167 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||| | || || |||||| ||||| ||||| || || || ||||| Sbjct 149166 -GACACCATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCA 149108 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || ||||| | || || || || ||||| |||| | | | ||||| || Sbjct 149107 GCAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGGCGCACTCTTGCTGACTACAA 149048 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| || |||||||| |||| |||| ||||| ||||| || |||| Sbjct 149047 CATTCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTTAGGGGTGGAA 148998 >seq5010 Length=51657 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || ||||| | |||||| |||| | ||||| | Sbjct 37836 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCTTCC 37895 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||||| ||||| || || || || || ||||| Sbjct 37896 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAG 37955 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | | ||| ||||||||||| |||| | | | || |||||||||| Sbjct 37956 CAGAGGTTGATCTTTGCCGGTAAACAACTCGAGGATGGCCGCACCCTCGCCGACTATAAC 38015 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || || || || |||| |||||||| Sbjct 38016 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 38047 >seq2385 Length=44452 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| ||| |||||||| | || | || ||| Sbjct 34422 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34481 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||||| || || || || || ||||| ||||| Sbjct 34482 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 34541 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | || ||||| | ||||||| ||| | || || || ||| Sbjct 34542 CAGAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAAC 34601 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || |||||||| | ||||| ||||| Sbjct 34602 ATCCAGAAGGAATCTACGCTTCATCTCGTCCT 34633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| ||| |||||||| | || | || ||| Sbjct 34650 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34709 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 34710 GACACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 34769 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||||| ||||||| | || || || || || |||| | || | || || || || Sbjct 34770 CAAAGGCTCATTTTTGCAGGGAAGCAGCTTGAGGATG-GACGCACTTTGGCTGATTACAA 34828 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||| |||||||| |||| || ||||| | ||| | || |||| Sbjct 34829 CATCCAAAAGGAATCTACGCTCCACCTTGTCCTCCGCCTTCGTGGTGGAA 34878 >seq490 Length=81643 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || ||||| || | || ||| | || | ||||| Sbjct 59058 ATGCAGATATTTGTTAAGACCTTGACTGGTAAGACTATTACCCTTGAGGTTGAATCGTCA 59117 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||||| ||||| || || || || || || || Sbjct 59118 GACACCATTGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 59177 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||| | | || || || |||||||||| | | | | || || ||| Sbjct 59178 CAAAGACTCATATTTGCAGGGAAGCAGCTCGAAGATGGACGCACCCTTGCTGATTACAAC 59237 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || |||||||| |||| || ||||| Sbjct 59238 ATCCAGAAGGAATCTACACTCCACCTTGTCCT 59269 >seq2468 Length=52418 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | ||||| || || | || || || |||||||| |||| | || || Sbjct 9914 AAGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCG 9973 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | ||||| ||||| ||||| || || || || || || Sbjct 9974 TCCGACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 10033 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | ||||| | || |||||| || || ||||| | | | | | |||||| Sbjct 10034 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGACTAC 10093 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || ||||||| ||||| Sbjct 10094 AACATCCAGAAGGAGTCCACCCTCCATCTCGTCCT 10128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478421357581920