Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 93.3 4e-14
seq220 87.8 2e-12
seq5010 86.0 5e-12
>seq2385
Length=44452
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | ||||| ||| |||| ||| | || || ||| |
Sbjct 34422 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34481
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||||| || || || ||||| ||||| |||||
Sbjct 34482 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 34541
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | | || || || | ||||||| ||| | || ||||| |||
Sbjct 34542 CAGAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAAC 34601
Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194
|| || || |||||||| |||||
Sbjct 34602 ATCCAGAAGGAATCTACGCTTCAT 34625
>seq220
Length=196394
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | ||||| || |||| ||| |||| || ||| |
Sbjct 149226 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTTGAGAGCTCA 149167
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | || || |||||| ||||| |||||||| || || |||||
Sbjct 149166 GACACCATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAG 149107
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | || || ||||| ||||| |||| | | | || || |||
Sbjct 149106 CAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGGCGCACTCTTGCTGACTACAAC 149047
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||| || |||||||| | || || ||| | || | || || |||
Sbjct 149046 ATTCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTTAGGGGTGGA 148999
>seq5010
Length=51657
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || ||| | ||||| ||| | || ||| | ||||||||| |
Sbjct 38520 ATGCAGATCTTCGTCAAGACACTTACTGGCAAAACCATCACCCTTGAAGTCGAGAGCTCG 38579
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || | || || || || ||||| || || || || || |||||
Sbjct 38580 GATACCATTGACAACGTTAAGGCTAAAATCCAGGACAAGGAGGGGATTCCCCCGGATCAG 38639
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | || |||||||| || || |||| | | | | | ||||||||||
Sbjct 38640 CAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCCGATTATAAC 38699
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| |||||||| ||
Sbjct 38700 ATTCAGAAAGAATCCAC 38716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429724907604330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |