Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3117 96.9 4e-15 seq32078 91.5 2e-13 >seq3117 Length=39173 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 ||| || ||||| || ||||| || ||||| ||||| ||||| || ||| | |||| Sbjct 14891 AGTGCCTGCATTGAACAAGGTCGGCGAAGCATGAGTGAACCAACGTTGAGACATCAGATG 14950 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| || || || || || || || || || ||||| || | || | ||| || Sbjct 14951 GTATGTTCTGATGGCAGACTCAATGTCATCTTTGTGGATTCCAACAGATACTCTCATCAA 15010 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 ||||||||| ||||| || || | ||| | |||||||| || || |||| | Sbjct 15011 CATGTGCTGCGGTCTCTCCACAACCTTTCCAGAAACTTTCAACAGATATGACCTTTCGAG 15070 Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||||||||| ||||| |||| || |||||| || || ||||| || Sbjct 15071 AGTTTTAAATCCAAAGTAGTCATAGTCAAAGTCACGGTCATAAATTAT 15118 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || || |||||||||||| || ||| ||| ||| ||||| || || | ||| ||| Sbjct 13840 TCAAATTCGTCTCCCCAACAATCAGCCAATCCTGGAGCTTCATTAGGGCAAAACAATGAC 13899 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || | || | ||||| || | || ||| ||||| || ||||||||||| || | |||| Sbjct 13900 CATTGACCATTATCCTGAACCCTTTGCATGAAGAGGTCGGGAATCCAAAGTGCAAAAAAT 13959 Query 63113 AGATCTCTGGTTCTATGTTCCTC 63135 ||||| || | |||||| || || Sbjct 13960 AGATCCCTTGCTCTATGCTCTTC 13982 >seq32078 Length=1569 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| |||||||| ||||||||||| | || | |||||||| || ||||| Sbjct 1148 CAGGCGAAGTCGCAGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGC 1089 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| ||||| ||||| || ||||| || ||||| ||| || || || ||||| Sbjct 1088 CCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAGAAG 1029 Query 32781 ATTCCTTCTACTGCCGCAAAGGC 32803 || || || || |||||||| Sbjct 1028 ATACCCTCGACGCAGGCAAAGGC 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633312918765600