Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2385 120 3e-22 seq490 109 5e-19 seq2468 107 2e-18 seq410 105 6e-18 seq220 100 2e-16 seq564 95.1 1e-14 seq5010 93.3 4e-14 seq263 87.8 2e-12 >seq2385 Length=44452 Score = 120 bits (132), Expect = 3e-22 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| |||||||| || ||||||| | || || ||||| || Sbjct 33815 ATGCAAATCTTTGTAAAGACATTGACCGGGAAGACCATCACTCTTGAGGTCGAGTCATCC 33874 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || | || |||| ||| ||||| || || ||||| || ||| Sbjct 33875 GATACAATCGA--CAATGTTAAGGCCAAAATTCA-GGACAAGGAGGGAATTCCTCCGGAC 33931 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || ||||| ||||||||| | || |||| ||||| ||| || ||| Sbjct 33932 CAGCAGCGTCTGATCTTTGCTGGCAAACAACTCGAGGATGGCCGCACCCTGGCTGACTAC 33991 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || || Sbjct 33992 AACATCCAGAAGGAGTCAACACTCCA 34017 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| |||| || || |||| || | || || || || || Sbjct 34877 AATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAATCTTC 34936 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||| || || |||| | ||||| | ||| |||||||| || ||||| || | Sbjct 34937 AGACACCATTGACAACGTCA---AGGCAAAGATTCAG-GACAAAGAGGGCATTCCTCCGG 34992 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| ||| || | || ||||| || || || | || || | ||||| | | || | Sbjct 34993 ACCAGCAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGACGGGCGCACCCTAGCAGACT 35052 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||||||| || || || || ||| | || || Sbjct 35053 ACAATATTCAAAAGGAGTCGACCCTGCATCTGGTTCT 35089 >seq490 Length=81643 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || |||||| |||| || || |||| || | || || || || || Sbjct 59514 ATGCAGATATTCGTCAAGACTCTGACTGGCAAGACCATAACCCTTGAGGTTGAATCTTCA 59573 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | ||||||| ||| |||||||| || ||||| || ||| Sbjct 59574 GACACCATTGA--CAATGTCAAGGCAAAAATTCAG-GACAAAGAGGGCATTCCTCCAGAC 59630 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | || ||||| || || || | || |||| ||||| | | || ||| Sbjct 59631 CAACAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGGCGCACCCTAGCAGACTAC 59690 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||||| || || || || ||| | || || Sbjct 59691 AATATTCAAAAGGAGTCAACCCTGCATCTGGTTCT 59725 >seq2468 Length=52418 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 24992 CGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051 ||||| ||||| || ||||| ||||| | || || || | ||||| |||| ||||| Sbjct 9910 CGGAAAGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGA 9969 Query 25052 GTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 |||||| ||||| ||||| | ||| || ||| ||||| || || || || || Sbjct 9970 GTCGTCCGACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCC 10029 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||| |||||| | || || |||||||| || | ||||| | ||||| | | ||| Sbjct 10030 GGACCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGA 10089 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || ||||| || ||| | || || Sbjct 10090 CTACAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCT 10128 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| |||| ||||||||||| Sbjct 718 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 777 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || ||||| Sbjct 778 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 837 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | || || |||||||| || | ||||| | || || | | ||| ||||| Sbjct 838 CAGCGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGGCGTACCCTTGCCGACTACAAC 897 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || ||| | || || Sbjct 898 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCT 929 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | || || || | ||||| |||| ||||||||||| ||||| ||||| Sbjct 10274 GTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGACACCATCGAC 10333 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 | ||| || ||| ||||| || || || || || ||||| |||||| | || Sbjct 10334 AACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGGCTCATC 10393 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 || |||||||| || | ||||| | ||||| | | ||| ||||| || || || || Sbjct 10394 TTCGCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGACTACAACATCCAGAAGGAG 10453 Query 25191 TCCACGCTACATTTAGTGCT 25210 ||||| || ||| | || || Sbjct 10454 TCCACCCTCCATCTCGTCCT 10473 >seq410 Length=85275 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || | ||||| | || |||||||| || Sbjct 46369 ATGCAGATCTTCGTGAAGACTCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCATCG 46428 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || |||||| Sbjct 46429 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGAATACCGCCGGACCAA 46488 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | || || |||||||| || | || || | ||||| | | ||||||||| Sbjct 46489 CAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACACTCGCCGATTACAAC 46548 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 46549 ATCCAGAAGGAGTCCACTCTTCA 46571 >seq220 Length=196394 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || ||||| | || ||||| |||| || | || |||||| || Sbjct 148999 AATGCAAATCTTCGTGAAGACCCTCACTGGTAAGACCATTACCCTGGAGGTGGAGAGCTC 148940 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||| || ||||| || ||| ||||| || ||||| || || ||||| Sbjct 148939 TGACACTATTGATAATGTGAAGGCGAAGATCCAAGACAAGGAGGGGATCCCGCCGGACCA 148880 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || || || || || || | || |||| |||||| ||| || || || Sbjct 148879 GCAGAGACTCATCTTCGCTGGGAAGCAGCTGGAGGATGGGCGCACTTTGGCAGACTATAA 148820 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||| ||||| || ||| | ||||| Sbjct 148819 CATTCAGAAAGAGTCCACTCTCCATCTGGTGCT 148787 >seq564 Length=78751 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || |||| || || | ||||| |||| ||||||||||| Sbjct 11453 ATGCAGATCTTCGTGAAAACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCGTCG 11394 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| |||| || || | ||| ||||| |||||||| || || ||||| Sbjct 11393 GACACCATCGACAACGTGAAGGCGAAGATTCA-GGACAAGGAAGGGATCCCGCCGGACCA 11335 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || ||||| || ||| | || || | ||||| | | || ||||| Sbjct 11334 GCAGCGTCTCATATTCGCCGGAAAGCAACTCGAGGACGGACGCACCCTTGCTGACTACAA 11275 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 11274 CATCCAGAAGGAGTCCACCCTCCA 11251 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || | ||||| |||| ||||||||||| Sbjct 22292 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCGTCG 22233 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| |||| || || | ||| ||||| |||||||| || || ||||| Sbjct 22232 GACACCATCGACAACGTGAAGGCGAAGATTCA-GGACAAGGAAGGGATCCCGCCGGACCA 22174 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || || ||| | || || | ||||| | | || ||||| Sbjct 22173 GCAGCGTCTCATATTCGCGGGAAAGCAACTCGAGGACGGACGCACCCTTGCTGACTACAA 22114 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 22113 CATCCAGAAGGAGTCCACACTCCA 22090 >seq5010 Length=51657 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || | || || | || || ||| || Sbjct 38292 ATGCAGATCTTCGTGAAGACTCTGACAGGCAAGACGATTACCTTGGAGGTCGAGAGCTCC 38351 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | || ||||| | || | ||| || || ||||| || || || |||| Sbjct 38352 GACACCATTGA-TAACGTGAAGGCCAAGATTCAG-GATAAGGAAGGTATCCCCCCGGACC 38409 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || |||||||||||||||| || | || || | ||||| | | || |||| Sbjct 38410 AGCAGAGGCTTATTTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCGGACTACA 38469 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| ||||| ||||| || || | ||||| Sbjct 38470 ACATTCAGAAAGAGTCCACCCTCCACCTGGTGCT 38503 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| ||||||| | ||||| ||| || Sbjct 38520 ATGCAGATCTTCGTCAAGACACTTACTGGCAAAACCATCACCCTTGAAGTCGAGAGCTCG 38579 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| |||||| ||||| || |||||||| || || || Sbjct 38580 GATACCATTGACAACGTTAAGGCTAAAATCCAGGACAAGGAGGGGATTCCCCCGGATCAG 38639 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || || ||||| || | || |||| || || | | |||||| || Sbjct 38640 CAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCCGATTATAAC 38699 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||||||||| || || | ||||| Sbjct 38700 ATTCAGAAAGAATCCACCCTCCACCTGGTGCT 38731 >seq263 Length=97214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || |||| || | || || ||| || Sbjct 78077 ATGCAGATCTTCGTCAAGACGCTCACTGGCAAGACCATAACCCTTGAGGTCGAGAGCTCG 78018 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| |||| || ||||| || || ||||| || || Sbjct 78017 GACACCATTGA--CAATGTTAAAGCCAAAATCCAG-GACAAGGAGGGTATTCCCCCGGAT 77961 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || || || || || || | || |||| ||||| ||| ||| ||| Sbjct 77960 CAGCAGAGGCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGGCCGACTAC 77901 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || |||||||| || || || ||||| Sbjct 77900 AATATTCAGAAGGAATCCACCCTGCACTTGGTGCT 77866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433115242181090