Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4711 95.1 1e-14 seq1109 95.1 1e-14 seq10213 93.3 5e-14 seq1531 89.7 6e-13 seq548 89.7 6e-13 seq5772 86.0 7e-12 seq469 86.0 7e-12 seq10932 82.4 8e-11 seq252 82.4 8e-11 >seq4711 Length=31216 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||| Sbjct 3513 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGC 3572 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTAT 126356 |||||||| || ||||| |||||| ||| |||| Sbjct 3573 GTGGGTTCAAATCCCACTTCTGACATATTTTTAT 3606 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/94 (82%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||| Sbjct 12523 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGC 12582 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTAT 126356 |||||||| || ||||| |||||| || |||| Sbjct 12583 GTGGGTTCAAATCCCACTTCTGACATCTTTTTAT 12616 >seq1109 Length=116192 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 ||||||||| ||||||||||||||||||||||||| | ||| |||||||| | | || Sbjct 113563 ACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGA 113504 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||||| || ||||| |||||| ||| Sbjct 113503 GCGTGGGTTCAAATCCCACTTCTGACATATT 113473 >seq10213 Length=17192 Score = 93.3 bits (102), Expect = 5e-14 Identities = 77/93 (83%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 13377 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 13320 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 ||||||||| || ||||| |||||||||| || Sbjct 13319 CGTGGGTTCAAATCCCACTTCTGACAAATTTTT 13287 >seq1531 Length=54118 Score = 89.7 bits (98), Expect = 6e-13 Identities = 83/104 (80%), Gaps = 5/104 (5%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||| Sbjct 22521 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGC 22580 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||| || ||||| |||||| | || | |||||| || Sbjct 22581 GTGGGTTCAAATCCCACTTCTGACA---TTTTTTGGGAATTATT 22621 >seq548 Length=79489 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 69895 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 69952 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGT 126368 ||| || |||||| ||| |||||| || || | |||| || Sbjct 69953 TTCAAATCCCACAACTGTCAAATTTTTTTTATATTTTTCGT 69993 >seq5772 Length=27437 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 8772 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 8715 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 8714 GCGTGGGTTCAAATCCCACTTCTGACA 8688 >seq469 Length=82340 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 71570 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 71513 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 71512 GCGTGGGTTCAAATCCCACTTCTGACA 71486 >seq10932 Length=16028 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 10140 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 10197 Query 126325 GGGTTCGAACCCCACACCTGACAAATT 126351 |||||| || |||||| ||| ||| || Sbjct 10198 GGGTTCAAATCCCACAGCTGTCAATTT 10224 >seq252 Length=115700 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 47233 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAGG 47176 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 47175 GCGTGGGTTCAAATCCCACTTCTGACA 47149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556580378822640