Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2385 84.2 2e-11 seq490 84.2 2e-11 >seq2385 Length=44452 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || |||||||| || ||| | || || | | Sbjct 34422 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34481 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||| ||| ||||| ||||| | ||| | | || Sbjct 34482 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 34541 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| ||||||||||| || ||||| | |||||| ||| | || |||||||| Sbjct 34542 CAGAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAAC 34601 Query 22014 ATTCAGAAGGAATCTACTCTTCAT 22037 || |||||||||||||| |||||| Sbjct 34602 ATCCAGAAGGAATCTACGCTTCAT 34625 >seq490 Length=81643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| ||||| | || || | || ||||| ||||| ||| | || ||| | || Sbjct 59514 ATGCAGATATTCGTCAAGACTCTGACTGGCAAGACCATAACCCTTGAGGTTGAATCTTCA 59573 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||||||| || |||||||| | ||| | ||||| Sbjct 59574 GACACCATTGACAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 59633 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || |||||||| || || || || || ||| || | || || |||||| Sbjct 59634 CAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGGCGCACCCTAGCAGACTACAAT 59693 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||||| ||||| || || || ||| |||| Sbjct 59694 ATTCAAAAGGAGTCAACCCTGCATCTGGT 59722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357948965871244