Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 120 3e-22
seq490 116 3e-21
seq220 114 1e-20
seq410 87.8 2e-12
seq5010 86.0 5e-12
seq564 86.0 5e-12
>seq2385
Length=44452
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCT 114214
|| ||||| || | | ||| | ||| | || || || |||||||| ||||| || |||
Sbjct 35104 CCACCACGGAGGCGAAGAACCAGATGCAGGGTCGACTCCTTTTGAATATTGTAGTCTGCT 35045
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || ||||| || || ||||| ||||||| | ||| |||||||||||
Sbjct 35044 -AGGGTGCGCCCGTCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCCGGAGG 34986
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|||||| |||||||| ||||||| || | | |||| |||||| | ||||| ||
Sbjct 34985 AATGCCCTCTTTGTCCTGAATCTTTGCCTTGACGTTGTCAATGGTGTCTGAAGATTCAAC 34926
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || ||||| ||||| || || ||||| ||||||||
Sbjct 34925 CTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 34878
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | ||||||||| || || |||||||||||
Sbjct 34651 ATACCACCACGAAGGCGGAGGACGAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCA 34592
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| | ||||| || || |||| || | ||| || || |||
Sbjct 34591 GCGAGGGTTCGCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGA 34532
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || || || ||||||| || | | || | |||||| | || ||
Sbjct 34531 GGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCCGATGACTCA 34472
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||||||||| ||||| || || ||||| ||||||||
Sbjct 34471 ACCTCAAGGGTGATCGTTTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 34422
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||||||||| ||||| ||||||||||| || ||| || ||| ||||| || || ||
Sbjct 34847 CGTAGATTCCTTTTGGATGTTGTAATCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTCCC 34788
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
|| | ||||| | || |||||||| || ||||| || ||||| ||||| ||
Sbjct 34787 TGCAAAAATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTT 34728
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | |||||| | || || || || | ||| | ||||||||| ||||| ||
Sbjct 34727 AACATTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATCGTTTTGCCAGTCAGCGT 34668
Query 114365 TTTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 34667 CTTCACAAAGATCTGCAT 34650
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | ||| | || | || || || || || |||||||| ||
Sbjct 34044 ATGCCTCCACGAAGACGGAGAACAAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCA 33985
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || |||||||| ||||| |||| |||||||| |||||||||
Sbjct 33984 GCCAGGGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGA 33925
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||| || || ||||| ||| ||| | ||| | | || | || |||| || ||
Sbjct 33924 GGAATTCCCTCCTTGTCCTGAAT-TTTGGCCTTAACATTGTCGATTGTATCGGATGACTC 33866
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || | || | || || ||||||| || |||||||| || |||||
Sbjct 33865 GACCTCAAGAGTGATGGTCTTCCCGGTCAATGTCTTTACAAAGATTTGCAT 33815
>seq490
Length=81643
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCT 114214
|| ||||| || | | ||| | ||| | || || || |||||||| ||||| || |||
Sbjct 59740 CCACCACGGAGGCGAAGAACCAGATGCAGGGTTGACTCCTTTTGAATATTGTAGTCTGCT 59681
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || ||| ||||| || || || || ||||||| | ||||||||| |||||
Sbjct 59680 -AGGGTGCGCCCATCCTCAAGCTGCTTCCCCGCAAAGATGAGCCTCTGTTGGTCTGGAGG 59622
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|||||| |||||||| ||| ||| || | | |||| |||||| | ||||| ||
Sbjct 59621 AATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTGTCAATGGTGTCTGAAGATTCAAC 59562
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || ||||| |||||||| || || || ||||||||
Sbjct 59561 CTCAAGGGTTATGGTCTTGCCAGTCAGAGTCTTGACGAATATCTGCAT 59514
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | ||||||||| ||||||||||| |||||
Sbjct 59059 ATACCACCACGGAGACGGAGGACAAGGTGGAGCGTAGATTCCTTTTGAATGTTATAATCA 59000
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| ||| ||||| || || || || ||||||| | || ||||| ||
Sbjct 58999 GCAAGAGTACGTCCATCCTCAAGCTGCTTCCCTGCAAAGATGAGCCTTTGCTGGTCAGGG 58940
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| ||||| || ||||| ||| | | |||| |||||| | ||| ||
Sbjct 58939 GGGATGCCCTCTTTATCCTGGATCTTCGCTTTGACATTGTCAATGGTGTCCGAGGACTCA 58880
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || ||||| |||| || || ||||| |||||||||
Sbjct 58879 ACCTCAAGGGTGATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCATG 58829
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | |||||||| || || |||||||||||
Sbjct 59287 ATACCACCACGGAGGCGGAGGACAAGGTGGAGTGTAGATTCCTTCTGGATGTTGTAATCA 59228
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || || || || || | ||||| | || ||||||||
Sbjct 59227 GCAAGGGTGCGTCCATCTTCGAGCTGCTTCCCTGCAAATATGAGTCTTTGCTGGTCCGGG 59168
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||||| || | | |||| |||||| | |||||
Sbjct 59167 GGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGACGTTGTCAATGGTGTCTGACGATTCA 59108
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || |||| || || ||||| ||||||||
Sbjct 59107 ACCTCAAGGGTAATAGTCTTACCAGTCAAGGTCTTAACAAATATCTGCAT 59058
>seq220
Length=196394
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224
|| |||| || || || | |||||||| || ||||||||||| || | ||| ||
Sbjct 149009 AGCCTCAGCACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGC 149068
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
||| || || || ||||||||| ||||||| | ||| || ||||| |||||||||||
Sbjct 149069 CCATCCTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATGCCTTCC 149128
Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344
||||| |||||| |||| | || | |||||| | | || || || | |||
Sbjct 149129 TTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTG 149188
Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| ||| ||||| || || || || ||||| ||||||||
Sbjct 149189 ATCGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 149226
>seq410
Length=85275
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||||||||| || | | || | || | || || || || || ||||||||||||
Sbjct 46596 ACCGCCACGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGC 46537
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || || || || || || ||| ||||||| |||||||||||||| ||
Sbjct 46536 GAGTGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGTTGGTCCGGCGG 46477
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|| || || ||||| ||||| || | | || | |||||| | || || ||
Sbjct 46476 TATTCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGATGACTCCAC 46417
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | ||| || ||||| ||||| || || || ||||||||
Sbjct 46416 CTCAAGGGTGATCGTCTTCCCGGTGAGAGTCTTCACGAAGATCTGCAT 46369
>seq5010
Length=51657
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| |||||||| || | | || | || | || || ||||| ||||||||||| ||
Sbjct 38521 ATGCCGCCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCC 38462
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || || || || || || | || || | ||| ||||||||
Sbjct 38461 GCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCCGGG 38402
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || |||||| || | | |||| |||||||| | |||
Sbjct 38401 GGGATACCTTCCTTATCCTGAATCTTGGCCTTCACGTTATCAATGGTGTCGGAGCTCTCG 38342
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | ||| ||||| |||||||| || || || ||||||||
Sbjct 38341 ACCTCCAAGGTAATCGTCTTGCCTGTCAGAGTCTTCACGAAGATCTGCAT 38292
>seq564
Length=78751
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
|| || ||||| || || ||| | ||||||||||| |||||||| || || ||||| |||
Sbjct 11299 TCCTCGAGTTGCTTTCCGGCGAATATGAGACGCTGCTGGTCCGGCGGGATCCCTTCCTTG 11358
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| |||||| || | | || | |||||| | || || || || | ||| | |
Sbjct 11359 TCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATC 11418
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || || ||||| ||||| || || ||||||||
Sbjct 11419 GTCTTCCCCGTCAGCGTTTTCACGAAGATCTGCAT 11453
Score = 82.4 bits (90), Expect = 6e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
|| || ||||| || || ||| | ||||||||||| |||||||| || || ||||| |||
Sbjct 22138 TCCTCGAGTTGCTTTCCCGCGAATATGAGACGCTGCTGGTCCGGCGGGATCCCTTCCTTG 22197
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| |||||| || | | || | |||||| | || || || || | ||| | |
Sbjct 22198 TCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATC 22257
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || || ||||| || || || || ||||||||
Sbjct 22258 GTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 22292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419928120049032
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