Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2656 329 6e-85 seq32078 248 2e-60 seq7765 248 2e-60 seq2510 242 7e-59 >seq2656 Length=42395 Score = 329 bits (364), Expect = 6e-85 Identities = 514/726 (71%), Gaps = 12/726 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||||||||| |||||||| || |||||||| ||| || |||||||| Sbjct 42093 CTCGCCTTCTTCGCCGCCTCCGACGGCATCGTTCTCGAGAACCTCGCCGCCCGGTTCATG 42034 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || |||||| | ||||||||| ||||||||| |||||||| ||||| |||||| Sbjct 42033 AACGACGTGCAGCTCCCGGAGGCGCGCGCCTTCTACGGGTTCCAGATTGCCATCGAGAAC 41974 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||||| || || ||| | | || ||| ||| || | |||| Sbjct 41973 ATCCACTCCGAGATGTACTCCCTCCTCCTCGAGTCTTATATCAAGGACCCGGACGAGAAG 41914 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | | | || ||| ||| || ||||| | |||||| || |||||||| ||||||||| Sbjct 41913 ACCCGCCTCTTCCGGGCGATCGAGACCGTCCCCTGCGTCGGCAAGAAGGCCGACTGGGCG 41854 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCA-ACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 || ||||||| || || || | | | || |||| | || || ||||| || Sbjct 41853 GTCCGCTGGATC---CGT-TCGTCGGATTCCTACGCCGAGCGCCTCGTTGCCTTCGCCTG 41798 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 |||||| |||||||||||||| ||| ||||| | | ||||||||||||||| || || Sbjct 41797 CGTCGAAGGCATCTTCTTCTCCGGCTCCTTCTGCGCAATCTTCTGGCTCAAGAAGCGCGG 41738 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 || ||||| || ||||| ||||| ||||| |||||| | |||||||| || || Sbjct 41737 ACTC-ATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCTCGCGACGAGGGCCTCCACT 41679 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG-CCCTCGAAGGAGCGG 42899 | ||||| |||||||| | ||| |||| ||||| ||||| | |||| ||| || Sbjct 41678 GCGACTTCGCCTGCCTTC---TCTACAGCCTCCTCAACAACAAGTTGCCCGAA-GAGAGG 41623 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959 | | ||||| ||| ||||| || || || ||| ||||||| || | | ||| Sbjct 41622 ATTAGATCCATCGTCAAAGAGGCGGTCGACATTGAGCGGGAGTTCGTCTGCGACGCTCTG 41563 Query 42960 CCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 || ||| | || || || |||||| || || ||| | | |||||| ||| ||| ||| Sbjct 41562 CCTGTGGCGCTTGTAGGGATGAACGGGGAGCTGATGAGTCAATACATCGAGTTCGTAGCC 41503 Query 43020 GACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079 || | || ||| | | | | | |||| |||| | || || |||||| Sbjct 41502 GATCGGCTGCTGGGAGCGCTCGATTGCAGCAAAATCTATGGCGTCCCAAATCCGTTCGAC 41443 Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139 | |||||| ||| ||| || |||| ||||||||||| ||||||||| | || | ||| Sbjct 41442 TGGATGGAGCTCATATCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGAGGGTTGGCGAG 41383 Query 43140 TACCAG 43145 |||||| Sbjct 41382 TACCAG 41377 >seq32078 Length=1569 Score = 248 bits (274), Expect = 2e-60 Identities = 499/728 (69%), Gaps = 18/728 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||||||||| || |||||||| ||| |||||||| ||| | | |||||| Sbjct 721 CTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATG 780 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||||| | ||||| ||| |||||||||||||||||| ||||| |||||| Sbjct 781 TCCGACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAAC 840 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC-G 42601 | ||||| ||| ||||| || || ||| | || |||||| ||| ||| ||| | Sbjct 841 ATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAG 900 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | || || ||| || || || || | |||||| || |||||||| |||||||| Sbjct 901 TCGCGC-CTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGACTGGGC 959 Query 42662 GCTCAACTGGATCGAGA-GTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 || |||||| | ||| || || | || | |||| | | || |||||| || Sbjct 960 TCTGCGTTGGATCCACTCGTC--GA-GCTCCTTT-GCCGAGCGCATCGTCGCCTTTGCCT 1015 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780 ||||||||| ||||||||||| ||| |||| ||||||||||||||||||| || || Sbjct 1016 GCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGG 1075 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 ||||| || ||||||||||| ||||| |||||| | | |||||||| || || Sbjct 1076 GCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACT 1135 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA---GCCCTCGAAGGAGC 42897 | ||||| |||||||||| ||| |||| ||| | |||| |||| |||| Sbjct 1136 GCGACTTCGCCTGCCTCC---TCTACAGCCTCCTGAACAACAAATTGCCC---GAGGAAA 1189 Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957 || | ||||| | || ||||| || ||||| ||| ||| | | || Sbjct 1190 AAGTGAAGTCCATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGT 1249 Query 42958 TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 |||| || | ||||| ||||||||| | || ||| || ||||||| | | ||| | Sbjct 1250 TGCCAGTTGCACTGGTGGGCATGAACGGGGTTCTGATGAGCCAGTACATTGAATTCGTGG 1309 Query 43018 CCGACCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTC 43076 |||||| | || || | ||| | |||| | || | || || || Sbjct 1310 CCGACCGGTTGATGATGGCTCTTGGCT-ACAGCAAGATTTATGGCGTCACGAATCCTTTT 1368 Query 43077 GACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCC 43136 |||| |||||| |||||||||| |||| || || || || || ||||| | |||| | Sbjct 1369 GACTGGATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGC 1428 Query 43137 GACTACCA 43144 || ||||| Sbjct 1429 GATTACCA 1436 >seq7765 Length=42474 Score = 248 bits (274), Expect = 2e-60 Identities = 499/728 (69%), Gaps = 18/728 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||||||||| || |||||||| ||| |||||||| ||| | | |||||| Sbjct 40462 CTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATG 40403 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||||| | ||||| ||| |||||||||||||||||| ||||| |||||| Sbjct 40402 TCCGACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAAC 40343 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC-G 42601 | ||||| ||| ||||| || || ||| | || |||||| ||| ||| ||| | Sbjct 40342 ATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAG 40283 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | || || ||| || || || || | |||||| || |||||||| |||||||| Sbjct 40282 TCGCGC-CTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGACTGGGC 40224 Query 42662 GCTCAACTGGATCGAGA-GTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 || |||||| | ||| || || | || | |||| | | || |||||| || Sbjct 40223 TCTGCGTTGGATCCACTCGTC--GA-GCTCCTTT-GCCGAGCGCATCGTCGCCTTTGCCT 40168 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780 ||||||||| ||||||||||| ||| |||| ||||||||||||||||||| || || Sbjct 40167 GCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGG 40108 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 ||||| || ||||||||||| ||||| |||||| | | |||||||| || || Sbjct 40107 GCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCACT 40048 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA---GCCCTCGAAGGAGC 42897 | ||||| |||||||||| ||| |||| ||| | |||| |||| |||| Sbjct 40047 GCGACTTCGCCTGCCTCC---TCTACAGCCTCCTGAACAACAAATTGCCC---GAGGAAA 39994 Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957 || | ||||| | || ||||| || ||||| ||| ||| | | || Sbjct 39993 AAGTGAAGTCCATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGT 39934 Query 42958 TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 |||| || | ||||| ||||||||| | || ||| || ||||||| | | ||| | Sbjct 39933 TGCCAGTTGCACTGGTGGGCATGAACGGGGTTCTGATGAGCCAGTACATTGAATTCGTGG 39874 Query 43018 CCGACCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTC 43076 |||||| | || || | ||| | |||| | || | || || || Sbjct 39873 CCGACCGGTTGATGATGGCTCTTGGCT-ACAGCAAGATTTATGGCGTCACGAATCCTTTT 39815 Query 43077 GACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCC 43136 |||| |||||| |||||||||| |||| || || || || || ||||| | |||| | Sbjct 39814 GACTGGATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGC 39755 Query 43137 GACTACCA 43144 || ||||| Sbjct 39754 GATTACCA 39747 >seq2510 Length=43382 Score = 242 bits (268), Expect = 7e-59 Identities = 322/440 (73%), Gaps = 9/440 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||||||||| || |||||||| ||| |||||||| ||| | | |||||| Sbjct 20815 CTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATG 20874 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||||| | ||||| ||| |||||||||||||||||| ||||| |||||| Sbjct 20875 TCCGACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAAC 20934 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC-G 42601 | ||||| ||| ||||| || || ||| | || |||||| ||| ||| ||| | Sbjct 20935 ATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAG 20994 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | || || ||| || || ||||| | |||||| || |||||||| || ||||| Sbjct 20995 TCGCGC-CTCTTCCGCGCGATCGAGACCGTCCCCTGCGTCGGAAAGAAGGCCGAGTGGGC 21053 Query 42662 GCTCAACTGGATCGAGAGTCCCGACGCAA-CGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 ||| |||||| | | || || | || | |||| | | || |||||| || Sbjct 21054 GCTGCGTTGGATCCA----CTCGTCGAGTTCCTTTGCCGAGCGCATCGTCGCCTTTGCCT 21109 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAG 42779 ||||||||| ||||||||||| ||| ||||| ||||||||||||||||||| || || Sbjct 21110 GCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGAG 21169 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 | || ||||| || || |||||||| ||||| |||||| | | |||||||| || || Sbjct 21170 GCCTC-ATGCCTGGGCTAACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCAC 21228 Query 42840 AGGGACTTTGCCTGCCTCCT 42859 | ||||| ||||||||||| Sbjct 21229 TGCGACTTCGCCTGCCTCCT 21248 Score = 152 bits (168), Expect = 1e-31 Identities = 235/331 (71%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||||||||| || |||||||| ||| |||||||| ||| | | |||||| Sbjct 20066 CTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATG 20125 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||||| | ||||| ||| |||||||||||||||||| ||||| |||||| Sbjct 20126 TCCGACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAAC 20185 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAG-CG 42601 | ||||| ||| ||||| || || ||| | || |||||| ||| ||| ||| | Sbjct 20186 ATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAG 20245 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | | | || ||| || || || || | |||||| || |||||||| |||||||| Sbjct 20246 TCGC-GCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGACTGGGC 20304 Query 42662 GCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 || |||||| | | || || | || | |||| | | || |||||| || Sbjct 20305 TCTGCGTTGGATCCA----CTCGTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTTTGCCT 20360 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 ||||||||| ||||||||||| ||| |||| Sbjct 20361 GCGTCGAGGGTATCTTCTTCTCCGGCTCCTT 20391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943863654387360