Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2656 123 5e-23
seq32078 118 2e-21
seq7765 118 2e-21
seq2510 113 1e-19
>seq2656
Length=42395
Score = 123 bits (136), Expect = 5e-23
Identities = 289/431 (67%), Gaps = 4/431 (1%)
Strand=Plus/Minus
Query 243292 GCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGC 243351
|| ||||| ||||| |||| | ||||| ||||| || | || ||||| ||||||
Sbjct 41823 GCCGAGCGCCTCGTTGCCTTCGCCTGCGTCGAAGGCATCTTCTTCTCCGGCTCCTTCTGC 41764
Query 243352 GCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTC 243411
|| ||||| ||||| ||| || | |||||||||||| | || |||||| ||
Sbjct 41763 GCAATCTTCTGGCTCAAGAAGCGCGGACTCATGCCTGGCCTCACGTTCTCCAACGAGCTC 41704
Query 243412 ATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAG 243471
||| ||||||||||||||| ||| | |||| ||| | || ||| |
Sbjct 41703 ATCTCTCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTTCTCTACAGCCTCCTCAAC 41644
Query 243472 AACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAG 243531
|||||| | || || | | | | | ||| ||| ||| || || || | || |
Sbjct 41643 AACAAGTTGCCCGAAGAGAGGATTAGATCCATCGTCAAAGAGGCGGTCGACATTGAGCGG 41584
Query 243532 GAATTCATTTGCGACGCTATTCC-ATGCCGGCTTATTGGCATGAACTCTGAACTCATGGG 243590
|| ||| | ||||||||| | || || | |||| | || |||||| || || ||| |
Sbjct 41583 GAGTTCGTCTGCGACGCTCTGCCTGTGGC-GCTTGTAGGGATGAACGGGGAGCTGATGAG 41525
Query 243591 ACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTA 243650
|| |||||||| ||||||||||| || | | ||||| | || ||| | ||
Sbjct 41524 TCAATACATCGAGTTCGTAGCCGATCGGCTGCTGGGAGCGCTCGATTGCAGCAAAATCTA 41465
Query 243651 CAAC-TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709
| ||| | || || || | || ||||||||||| ||||| || ||||| || ||||
Sbjct 41464 TGGCGTCCCA-AATCCGTTCGACTGGATGGAGCTCATATCGCTGCAGGGGAAGACCAACT 41406
Query 243710 TCTTCGAAAAG 243720
||||||| |||
Sbjct 41405 TCTTCGAGAAG 41395
>seq32078
Length=1569
Score = 118 bits (130), Expect = 2e-21
Identities = 305/459 (66%), Gaps = 12/459 (3%)
Strand=Plus/Plus
Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345
|| ||||| ||||| ||||||||| | ||||| || ||||| | || |||||
Sbjct 985 TCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCC 1044
Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405
|| ||| ||||||| ||||| ||| || | |||||||| ||| | || |||
Sbjct 1045 TTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTCACCTTCTCCAAC 1104
Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465
||| ||||| || |||||||| || ||| | |||| || | || |
Sbjct 1105 GAGCTCATCTCCCGTGACGAGGGTCTCCACTGCGACTTCGCCTGCCTCCTCTAC---AGC 1161
Query 243466 CTCCAGAACAAGCTA---CCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAA 243522
|||| |||||| | || |||| || || ||| | ||| || || ||
Sbjct 1162 CTCCTGAACAACAAATTGCCCGAGGAAAAAGTGAAGTCCATCGTGGAAGACGCCGTCGAT 1221
Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCA--TGCCGGCTTATTGGCATGAACTCTG 243580
| |||| ||||||| | || ||||| | ||| ||| || | ||||||||| |
Sbjct 1222 ATCGAACGGGAATTCGTGTGTGACGCGTTGCCAGTTGCA--CTGGTGGGCATGAACGGGG 1279
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
|| ||| | |||||||| |||||||| |||||||| | | || || ||||| ||
Sbjct 1280 TTCTGATGAGCCAGTACATTGAATTCGTGGCCGACCGGTTGATGATGGCTCTTGGCTAC- 1338
Query 243641 AGAAAG-TGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGG 243699
|| ||| | || | || ||| || |||| || ||||||||||| ||| | || |||
Sbjct 1339 AGCAAGATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGGGG 1398
Query 243700 AAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
|||||||| ||||| || || | ||| | ||||| |||
Sbjct 1399 AAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTACCAA 1437
>seq7765
Length=42474
Score = 118 bits (130), Expect = 2e-21
Identities = 305/459 (66%), Gaps = 12/459 (3%)
Strand=Plus/Minus
Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345
|| ||||| ||||| ||||||||| | ||||| || ||||| | || |||||
Sbjct 40198 TCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCC 40139
Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405
|| ||| ||||||| ||||| ||| || | |||||||| ||| | || |||
Sbjct 40138 TTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTCACCTTCTCCAAC 40079
Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465
||| ||||| || |||||||| || ||| | |||| || | || |
Sbjct 40078 GAGCTCATCTCCCGTGACGAGGGACTCCACTGCGACTTCGCCTGCCTCCTCTAC---AGC 40022
Query 243466 CTCCAGAACAAGCTA---CCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAA 243522
|||| |||||| | || |||| || || ||| | ||| || || ||
Sbjct 40021 CTCCTGAACAACAAATTGCCCGAGGAAAAAGTGAAGTCCATCGTGGAAGACGCCGTCGAT 39962
Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCA--TGCCGGCTTATTGGCATGAACTCTG 243580
| |||| ||||||| | || ||||| | ||| ||| || | ||||||||| |
Sbjct 39961 ATCGAACGGGAATTCGTGTGTGACGCGTTGCCAGTTGCA--CTGGTGGGCATGAACGGGG 39904
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
|| ||| | |||||||| |||||||| |||||||| | | || || ||||| ||
Sbjct 39903 TTCTGATGAGCCAGTACATTGAATTCGTGGCCGACCGGTTGATGATGGCTCTTGGCTAC- 39845
Query 243641 AGAAAG-TGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGG 243699
|| ||| | || | || ||| || |||| || ||||||||||| ||| | || |||
Sbjct 39844 AGCAAGATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGGGG 39785
Query 243700 AAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
|||||||| ||||| || || | ||| | ||||| |||
Sbjct 39784 AAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTACCAA 39746
>seq2510
Length=43382
Score = 113 bits (124), Expect = 1e-19
Identities = 304/459 (66%), Gaps = 12/459 (3%)
Strand=Plus/Plus
Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345
|| ||||| ||||| ||||||||| | ||||| || ||||| | || |||||
Sbjct 21079 TCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCC 21138
Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405
|||||| ||||||| ||||| ||| ||| | |||||||| || | || |||
Sbjct 21139 TTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGGCTAACCTTCTCCAAC 21198
Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465
||| ||||| || |||||||| || ||| | |||| || | || |
Sbjct 21199 GAGCTCATCTCCCGTGACGAGGGACTCCACTGCGACTTCGCCTGCCTCCTCTAC---AGC 21255
Query 243466 CTCCAGAACAAGCTA---CCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAA 243522
|||| |||||| | || |||| || || ||| | ||| || || ||
Sbjct 21256 CTCCTGAACAACAAATTGCCCGAGGAAAAAGTGAAGTCTATCGTGGAAGACGCCGTCGAT 21315
Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCA--TGCCGGCTTATTGGCATGAACTCTG 243580
| |||| ||||||| | || ||||| | ||| ||| || | || |||||| |
Sbjct 21316 ATCGAACGGGAATTCGTGTGTGACGCGTTGCCAGTTGCA--CTGGTGGGTATGAACGGGG 21373
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
|| ||| | |||||||| |||||||| || ||||| | | || || ||||| ||
Sbjct 21374 TTCTGATGAGTCAGTACATTGAATTCGTCGCGGACCGGTTGATGATGGCTCTTGGCTAC- 21432
Query 243641 AGAAAG-TGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGG 243699
|| ||| | || | || ||| || |||| || ||||||||||| ||| | || |||
Sbjct 21433 AGCAAGATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGGGG 21492
Query 243700 AAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
|||||||| ||||| || || | ||| | ||||| |||
Sbjct 21493 AAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTACCAA 21531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102310732634100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |