Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2656 138 2e-27 seq7765 127 3e-24 seq32078 123 4e-23 seq2510 118 2e-21 >seq2656 Length=42395 Score = 138 bits (152), Expect = 2e-27 Identities = 481/748 (64%), Gaps = 36/748 (5%) Strand=Plus/Plus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| ||||||||||| |||| || ||||| ||||| | |||| || | Sbjct 41394 TCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGATATGAGCTCCATCCAGTCGAACGGAT 41453 Query 159708 TCTTCACGTGATAGCGCTT-CGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAAT 159766 | ||| |||| || | | |||| ||| || |||||| || || || || || Sbjct 41454 TTGGGACGCCATAGATTTTGCTGCAATC-GAGCGCTCCCAGCAGCCGATCGGCTACGAAC 41512 Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826 |||||||| || |||| |||| | ||| ||||| | ||| || || || || || Sbjct 41513 TCGATGTATTGACTCATCAGCTCCCCGTTCATCCCTACAAGCGCCACAGGCAGAGCGTCG 41572 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886 | | |||||| |||||| |||||||| || | || || | || | Sbjct 41573 CAGACGAACTCCCGCTCAATGTCGACCGCCTCTTTGACGATG----------GATCTAAT 41622 Query 159887 CCCGGCTT-GCCCAAAATGTGGTCCTTAA------ACAGGAGGCACGCAAAGTCGCAGTG 159939 || ||| | ||| ||| || | | || ||||| || ||||||||||| Sbjct 41623 CCTCTCTTCGGGCAACTTGTTGTTGAGGAGGCTGTAGAGAAGGCAGGCGAAGTCGCAGTG 41682 Query 159940 CAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACG 159999 || |||||||| |||||||||| ||||||||| | ||||||| ||||||| || || Sbjct 41683 GAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAACGTGAGGCCAGGCATGAGTCCGCG 41742 Query 160000 CGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCTAAAAAAGATCCCCTCCACGGCCG 160058 | |||||||| || || | |||| ||| | ||| || ||||| || || ||| | Sbjct 41743 CTTCTTGAGCCAGAAGATTG-CGCAGAAGGAGCCGGAGAAGAAGATGCCTTCGACGCAGG 41801 Query 160059 CAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTC------ATGGGTCCACCTTT 160112 | || || ||||| | ||| ||||| || || | || |||| | Sbjct 41802 CGAAGGCAACGAGGCGCTC---------GGCGTAGGAATCCGACGAACGGATCCAGCGGA 41852 Query 160113 TGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGT 160172 ||||| || |||||||| ||| ||| || | | ||||| || || | | | Sbjct 41853 CCGCCCAGTCGGCCTTCTTGCCGACGCAGGGGACGGTCTCGATCGCCCGGAAGAGGCGGG 41912 Query 160173 CCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCA 160232 || ||| | | |||||||| || | | || |||||||| || | ||| | Sbjct 41913 TCTTCTCGTCCGGGTCCTTGATATAAGACTCGAGGAGGAGGGAGTACATCTCGGAGTGGA 41972 Query 160233 CATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCT 160292 || |||||||| ||||| || |||||| ||||||| | |||||| || | Sbjct 41973 TGTTCTCGATGGCAATCTGGAACCCGTAGAAGGCGCGCGCCTCCGGGAGCTGCACGTCGT 42032 Query 160293 GTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCA 160352 |||||| | || || | ||| | ||||||| ||| || ||||| || | Sbjct 42033 TCATGAACCGGGCGGCGAGGTTCTCGAGAACGATGCCGTCGGAGGCGGCGAAGAAGGCGA 42092 Query 160353 ACACGTGAGAGATGAAATGTCTCTCGTC 160380 ||||| |||||||| || | ||||| Sbjct 42093 GGACGTGGGAGATGAAGTGGCGATCGTC 42120 >seq7765 Length=42474 Score = 127 bits (140), Expect = 3e-24 Identities = 239/348 (69%), Gaps = 5/348 (1%) Strand=Plus/Plus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 |||||||| || ||||||||||| ||||||||||| || ||||||| ||||||||| | | Sbjct 40029 AGGAGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 40088 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCT 160035 |||| || ||||||| || ||| |||||||| || |||| ||||||| | ||| Sbjct 40089 GTGAGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATGG-AGCAAAAGGAGCCGGA 40147 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGT 160095 || ||||| ||||| ||| ||||| || |||| | ||| ||| ||| | | | Sbjct 40148 GAAGAAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCTCGGCAA---AGGAGCTCGA 40204 Query 160096 GTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGAC 160155 ||| |||| | ||||| || ||||||||| ||| ||| || | | |||| Sbjct 40205 CGAGTGGATCCAACGCAGAGCCCAGTCGGCCTTCTTTCCGACGCAGGGGACGGTTTCGAT 40264 Query 160156 GGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGA 160215 ||| || | | || ||||| |||||||| || | | || || Sbjct 40265 CGCGCGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCGAGGAGGAGGGA 40324 Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAA 160263 |||||| || | ||| | || |||||||| ||||| ||| |||||| Sbjct 40325 GTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 40372 >seq32078 Length=1569 Score = 123 bits (136), Expect = 4e-23 Identities = 238/348 (68%), Gaps = 5/348 (1%) Strand=Plus/Minus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 |||||||| || ||||||||||| || |||||||| || ||||||| ||||||||| | | Sbjct 1154 AGGAGGCAGGCGAAGTCGCAGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 1095 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCT 160035 |||| || ||||||| || ||| |||||||| || |||| ||||||| | ||| Sbjct 1094 GTGAGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATGG-AGCAAAAGGAGCCGGA 1036 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGT 160095 || ||||| ||||| ||| ||||| || |||| | ||| ||| ||| | | | Sbjct 1035 GAAGAAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCTCGGCAA---AGGAGCTCGA 979 Query 160096 GTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGAC 160155 ||| |||| | ||||| || ||||||||| ||| ||| || | | |||| Sbjct 978 CGAGTGGATCCAACGCAGAGCCCAGTCGGCCTTCTTTCCGACGCAGGGGACGGTTTCGAT 919 Query 160156 GGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGA 160215 ||| || | | || ||||| |||||||| || | | || || Sbjct 918 CGCGCGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCGAGGAGGAGGGA 859 Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAA 160263 |||||| || | ||| | || |||||||| ||||| ||| |||||| Sbjct 858 GTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 811 >seq2510 Length=43382 Score = 118 bits (130), Expect = 2e-21 Identities = 237/348 (68%), Gaps = 5/348 (1%) Strand=Plus/Minus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 |||||||| || ||||||||||| ||||||||||| || ||||||| ||||||||| | | Sbjct 21248 AGGAGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 21189 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCT 160035 | || || ||||||| || ||| |||||||| || |||| ||| ||| | ||| Sbjct 21188 GTTAGCCCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATGG-AGCAGAAGGAGCCGGA 21130 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGT 160095 || ||||| ||||| ||| ||||| || |||| | ||| ||| ||| | | Sbjct 21129 GAAGAAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCTCGGCAA---AGGAACTCGA 21073 Query 160096 GTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGAC 160155 ||| |||| | ||||| || ||||||||| ||| ||| || | | ||||| Sbjct 21072 CGAGTGGATCCAACGCAGCGCCCACTCGGCCTTCTTTCCGACGCAGGGGACGGTCTCGAT 21013 Query 160156 GGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGA 160215 ||| || | | || ||||| |||||||| || | | || || Sbjct 21012 CGCGCGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCGAGGAGGAGGGA 20953 Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAA 160263 |||||| || | ||| | || |||||||| ||||| ||| |||||| Sbjct 20952 GTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 20905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794754779720160