Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2510 176 6e-39 seq7765 174 2e-38 seq32078 170 2e-37 seq4514 149 8e-31 seq2656 143 3e-29 seq4174 134 2e-26 seq70 123 3e-23 seq5771 98.7 1e-15 seq992 96.9 4e-15 seq4518 95.1 2e-14 >seq2510 Length=43382 Score = 176 bits (194), Expect = 6e-39 Identities = 133/157 (85%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 102164 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 |||| |||||||||| ||||| || |||| ||||| || || ||||||||||||||||| Sbjct 21072 GTCGAGTTCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTC 21131 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||||||| | || | ||||||||||||||||| |||||||| || || ||| Sbjct 21132 CGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGGCTAACCTT 21191 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||||| ||||| |||||||||||||||||| Sbjct 21192 CTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCAC 21228 >seq7765 Length=42474 Score = 174 bits (192), Expect = 2e-38 Identities = 186/244 (76%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 |||||| || ||||| || ||| |||| || || || | |||||| || || Sbjct 40288 GAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGAC 40229 Query 102138 TGGGCTATGAAGTGGTTTGATACAAA-GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 102196 |||||| || ||| ||| || |||| | |||||||| ||||| || |||| || Sbjct 40228 TGGGCTCTGC----GTTGGATCCACTCGTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTT 40173 Query 102197 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 102256 ||| || || ||||||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 40172 TGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAA 40113 Query 102257 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316 ||| || |||||||| || ||| ||||||||||||||| ||||| |||||||||||||| Sbjct 40112 GCGGGGCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACT 40053 Query 102317 CCAC 102320 |||| Sbjct 40052 CCAC 40049 >seq32078 Length=1569 Score = 170 bits (188), Expect = 2e-37 Identities = 185/244 (76%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 |||||| || ||||| || ||| |||| || || || | |||||| || || Sbjct 895 GAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGAC 954 Query 102138 TGGGCTATGAAGTGGTTTGATACAAA-GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 102196 |||||| || ||| ||| || |||| | |||||||| ||||| || |||| || Sbjct 955 TGGGCTCTGC----GTTGGATCCACTCGTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTT 1010 Query 102197 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 102256 ||| || || ||||||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 1011 TGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAA 1070 Query 102257 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316 ||| || |||||||| || ||| ||||||||||||||| ||||| ||||||||||| || Sbjct 1071 GCGGGGCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCT 1130 Query 102317 CCAC 102320 |||| Sbjct 1131 CCAC 1134 >seq4514 Length=32024 Score = 149 bits (164), Expect = 8e-31 Identities = 279/401 (70%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 15933 CGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCAAAACCATCCATCTCTG 15990 || || || || || ||||||| ||||| || ||| || |||| ||||||||||| | Sbjct 21808 CGGTTTGTAGCAGCAATGACAATGATACCAGTATTTCCTT--CAAAGCCATCCATCTCAG 21865 Query 15991 TCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC 16050 | || |||||||||| |||||||||| ||||||||| | | ||| | | | Sbjct 21866 TTAAGAGCTGGTTAAGTGTTTGTTCCCTTTCATCATTTCCACCTCCAATACCTGTTCCTC 21925 Query 16051 GTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTC-GCGA 16109 |||| |||| || |||||||||||||||| ||| || ||||||||| |||||| | Sbjct 21926 TTTGCCTTCCAACAGCATCAATCTCATCAACGAAAACAATGCATGGTGCATTTTCTTTGG 21985 Query 16110 GCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAA 16167 | ||| ||| ||||| || || |||| || || ||||||||||||||||| |||| Sbjct 21986 CCTTCTTGAAA-AGATCACG--AACTCTTGAAGCACCAACACCAACAAACATCTCTACAA 22042 Query 16168 AGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCG 16226 | | | | ||| |||| || || || ||| || |||||| ||||| || || Sbjct 22043 ACTCGGAACCAGAA-ATTGAGAAAAATGGAACACCAGCTTCACCAGCAATTGCCTTAGCC 22101 Query 16227 AGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCG 16286 || || ||||| || || ||||| ||| | || || ||||| ||||| || Sbjct 22102 AGCAGTGTCTTCCCAGTGCCTGGGGGACCGACAAGTAGAACACCTTTAGGAATTCGTGCA 22161 Query 16287 CCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 16327 || | | | ||||| |||| ||| ||||| ||||| Sbjct 22162 CCGACAGCGGTGAACCTCTCTGGTTTCTTTAGAAATTCCAC 22202 >seq2656 Length=42395 Score = 143 bits (158), Expect = 3e-29 Identities = 126/157 (80%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 102164 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 |||| ||||| || ||||| ||| | || || || || || || || ||||||||||| Sbjct 41836 GTCGGATTCCTACGCCGAGCGCCTCGTTGCCTTCGCCTGCGTCGAAGGCATCTTCTTCTC 41777 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||||||||| || | |||||||||||||| || |||||||| || ||| || Sbjct 41776 CGGCTCCTTCTGCGCAATCTTCTGGCTCAAGAAGCGCGGACTCATGCCTGGCCTCACGTT 41717 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||||| |||||||| |||||||| |||||| Sbjct 41716 CTCCAACGAGCTCATCTCTCGCGACGAGGGCCTCCAC 41680 >seq4174 Length=33674 Score = 134 bits (148), Expect = 2e-26 Identities = 267/393 (68%), Gaps = 2/393 (1%) Strand=Plus/Plus Query 15888 TCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCG 15947 ||||| || || || | ||| || || ||| | ||||| | ||||| || || || Sbjct 22944 TCAAAACGTCCAGGCCTAAGAAGAGCAGAATCCAATATATCTGCACGATTGGTGGCTGCA 23003 Query 15948 ATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATA 16007 || |||| ||||| || | ||||||||||||||||| |||||||| || || | | Sbjct 23004 ATTACAATTATACCAGTATTACCCTCAAAACCATCCATCTCGGTCAAAAGTTGATTTAGA 23063 Query 16008 GTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCA 16067 || ||||| | ||||||||| || | | || | | | ||| | || || ||| Sbjct 23064 GTCTGTTCTCTTTCATCATTTCCTCCCCCAATGCCTGTTCCTCTTTGTCTCCCAACAGCA 23123 Query 16068 TCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCC 16127 ||||| || |||| || || || || ||| ||| || || || || ||||| Sbjct 23124 TCAATTTCGTCAACAAAAACAATACAAGGTGCATTCTCTTTTGCCTTTTTGAAAAGATCA 23183 Query 16128 CGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG- 16186 || || || || || ||||||||||||||||| ||||| | || | ||| || | Sbjct 23184 CGGACTCGTGAAGCACCGACACCAACAAACATCTCAACAAATTCTGATCCCGAA-ATAGA 23242 Query 16187 GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACC 16246 || || ||||| || ||||| ||||| ||| || ||||||||||| || || || Sbjct 23243 GAAAAATGGGACTCCAGCCTCACCTGCAATAGCTTTAGCAAGAAGAGTCTTTCCAGTCCC 23302 Query 16247 TGGCTTACCCGCGAGGAGGGCACCTCGTGGAAT 16279 ||| ||| | ||||| ||||| ||||| Sbjct 23303 TGGAGGACCAACAAGGAGAACACCTTTAGGAAT 23335 >seq70 Length=129315 Score = 123 bits (136), Expect = 3e-23 Identities = 283/414 (68%), Gaps = 19/414 (5%) Strand=Plus/Plus Query 15933 CGATTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTG 15990 || || || || || || |||| | ||| |||||| || |||| ||||||||||| | Sbjct 36480 CGGTTTGTAGCTGCAATAACAATGACACCAGTGTTTCCTT--CAAAGCCATCCATCTCAG 36537 Query 15991 TCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACT 16048 | || |||||||||| |||||||| | |||||||| | | | | | || || | Sbjct 36538 TTAAGAGCTGGTTAAGCGTTTGTTCTCTCTCATCATTTCC--ACCTCCAATTCCTGCTCC 36595 Query 16049 GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTC-GC 16107 | |||| |||| || |||||||| ||||||| ||| || ||||||||| |||||| Sbjct 36596 TCTTTGCCTTCCAACTGCATCAATTTCATCAACGAAAACAATGCATGGTGCATTTTCTTT 36655 Query 16108 GAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCAC 16165 | | ||| ||| || || || || |||| || || || || ||||||||||| || Sbjct 36656 GGCCTTCTTGAAA-AGTTCACG--AACTCTTGAAGCACCAACGCCGACAAACATCTCTAC 36712 Query 16166 AAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGG 16224 ||| | | | ||| |||| || || || ||| || |||||| || || || | Sbjct 36713 AAACTCAGAACCTGAA-ATTGAGAAAAATGGAACACCAGCTTCACCGGCGATTGCCTTAG 36771 Query 16225 CGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGG 16284 | || || ||||| || ||||| || ||| | || || ||||| ||||| | Sbjct 36772 CCAGCAGTGTCTTCCCAGTACCCGGAGGACCAACAAGAAGAACACCTTTAGGAATTCGTG 36831 Query 16285 CGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCA 16338 | || | || | | ||||| |||| ||| ||||| || |||| |||||| Sbjct 36832 CACCGACTGCAGTGAACCTCTCTGGTTTCTTCAGAAATTCTACAA---CTTCCA 36882 >seq5771 Length=39350 Score = 98.7 bits (108), Expect = 1e-15 Identities = 250/375 (67%), Gaps = 14/375 (4%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || || |||||||||||||| ||||| || ||||| ||||| | ||| || ||| || | Sbjct 4001 AACCCGTCCATCTCTGTCAAGAGCTGATTGATAGTCTGTTCTCTTTCGTCGTTCCCT--C 3944 Query 16035 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | | | ||||||| || ||| |||| || |||||||| || || ||||| || |||| Sbjct 3943 CTCCAAGTCCAGCACCACGCTGCCTTCCGACAGCATCAATTTCGTCTATGAACACAATGC 3884 Query 16093 ATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 | || ||| ||| || | || || | || || || | ||| || || Sbjct 3883 AGGGGGCCTTGGATTTTGCCTTC----TCGAACAAGTCACGGACCCTTGAGGCACCGACC 3828 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 16208 || || |||| ||| || || | | || | |||| || |||||| || | || Sbjct 3827 CCCACGAACAGCTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCTGCCTCC 3768 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268 || || | || ||||| |||||||||||||| || || ||| || | |||| |||| Sbjct 3767 CCGGCCACCGCCCGGGCCAGAAGAGTCTTACCGGTTCCCGGCGGCCCGACCAGGA-GGCA 3709 Query 16269 CCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 16327 | | | || || || || ||| | ||| | ||||| | ||| || || ||||| Sbjct 3708 GCCCTTGGGGATTTTCGCTCCAAGCGCCGTGTACTTGTCAGGGTTCTTGAGGAAGTCCAC 3649 Query 16328 AATCTCTTCCAATTC 16342 | ||| | ||| || Sbjct 3648 CACCTCCTGCAACTC 3634 >seq992 Length=120957 Score = 96.9 bits (106), Expect = 4e-15 Identities = 249/373 (67%), Gaps = 10/373 (3%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || ||||||||||||||||| ||||| || || || || || | || || || | | Sbjct 3160 AACCCATCCATCTCTGTCAATAGCTGATTGATTGTCTGCTCTCTCTCGTCGTTTCCA--C 3103 Query 16035 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | | | || |||| || ||| ||||||| |||||||| ||||| ||||| || |||| Sbjct 3102 CTCCAAGCCCGGCACCACGCTGCCTTCCCACAGCATCAATTTCATCTATGAACACAATGC 3043 Query 16093 ATGGTTGATTTTCGCGAGCGACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 | || | |||| || |||| || | ||||| || | | ||| ||||| || Sbjct 3042 AGGG--GGCCTTCGATTTCGCCTTCTCGAACAAGTCCCGGACTCTCGAGGCACCCACTCC 2985 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 16210 ||||||| || || || | | || | |||| || |||||| || | || || Sbjct 2984 CACAAACAATTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCGGCCTCCCC 2925 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 || | || | ||| || ||||||||||| || || ||| || | | || |||| | Sbjct 2924 GGCCACTGCCCTGGCCAGCAGAGTCTTACCAGTTCCGGGCGGCCCGACCAAGA-GGCAGC 2866 Query 16271 TCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAA 16329 | | || ||||| || || | | ||| | ||||| | ||| || |||||||| | Sbjct 2865 CCTTGGGGATCTTTGCTCCGAGTGCGGTGTACTTGTCAGGGTTCTTGAGGAAATCCACCA 2806 Query 16330 TCTCTTCCAATTC 16342 ||| | ||| || Sbjct 2805 CCTCCTGCAACTC 2793 >seq4518 Length=32015 Score = 95.1 bits (104), Expect = 2e-14 Identities = 273/412 (66%), Gaps = 11/412 (3%) Strand=Plus/Plus Query 15884 ACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGC 15943 ||||||||| ||||| || | | | || | ||| | |||||| | || || | Sbjct 18997 ACGATCAAATCGACCAGGCCTTAACAAGGCCTTATCTAATATATCAGGTCTGTTAGTACC 19056 Query 15944 GGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTT 16003 ||||| || || | || | | | | ||||||||||||||||| | | ||| || Sbjct 19057 GGCGAGTACTACTACTCCAGATGTGGTCCCAAAACCATCCATCTCTACAAGCAACTGATT 19116 Query 16004 AATAGTTTGTTCCCGTTCATCATTCGC---TGGCATACCACCAGCACTGCGTTGCTTTCC 16060 | ||| ||| ||||||||||| || || | ||| ||| | | ||||| | Sbjct 19117 TAGAGTGCTTTCACGTTCATCATTTGCACCTGAGAAACCTCCACGGCCTC-TTGCTCGAC 19175 Query 16061 CACG-GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAA 16119 || |||||||| |||||||| || | || | ||| | | | ||| ||| || Sbjct 19176 CAATCGCATCAATTTCATCAATAAATATTATACTGGGTGCACACTGCCTAGCTTCTTGAA 19235 Query 16120 AGAGATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCGGC 16177 | | || |||||| | ||| | || |||||||||||||| |||| ||| | | | Sbjct 19236 ACAAATTCCGTACTC--TTGCTGGTCCAACACCAACAAACATTTCCAGAAAATCCGAACC 19293 Query 16178 GGAACATTGG-ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 16236 ||| |||| | ||||| |||| ||| ||||| ||| | ||| | |||||||||| Sbjct 19294 GGAT-ATTGACAAAAAGGGCACATCAGACTCACCTGCAGTTGCTTTAGAAAGAAGAGTCT 19352 Query 16237 TACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 | |||||||| || || | || ||||||||| ||||| || || || Sbjct 19353 TTCCCGTACCAGGAGGTCCAACAAGAAGGGCACCTTTAGGAATTTTAGCTCC 19404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620429809645920