Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq4514 159 4e-34
seq4174 154 2e-32
seq32078 132 6e-26
seq70 131 2e-25
seq7765 129 7e-25
seq2510 127 2e-24
seq5771 120 4e-22
seq2656 118 1e-21
seq992 95.1 1e-14
seq3117 86.0 7e-12
>seq4514
Length=32024
Score = 159 bits (176), Expect = 4e-34
Identities = 230/320 (72%), Gaps = 6/320 (2%)
Strand=Plus/Plus
Query 9240 CGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAAAACCATCCATCTCTG 9297
|| || || || || ||||||| ||||| || ||| || |||| ||||||||||| |
Sbjct 21808 CGGTTTGTAGCAGCAATGACAATGATACCAGTATTTCCTT--CAAAGCCATCCATCTCAG 21865
Query 9298 TCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC 9357
| || || ||||||| |||||||||| ||||||||| | | ||| | | |
Sbjct 21866 TTAAGAGCTGGTTAAGTGTTTGTTCCCTTTCATCATTTCCACCTCCAATACCTGTTCCTC 21925
Query 9358 GTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGG 9417
|||| |||| || |||||||||||||||| ||| ||||| |||||| |||||| ||
Sbjct 21926 TTTGCCTTCCAACAGCATCAATCTCATCAACGAAAACAATGCATGGTGCATTTTCTTTGG 21985
Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477
| | | || ||||| ||||| ||| || || ||||||||||||||||| ||||| |
Sbjct 21986 CCTTCTTGAAAAGATCACGAACTCTTGAAGCACCAACACCAACAAACATCTCTACAAACT 22045
Query 9478 TTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536
| | ||| |||| || || || ||| || |||||| ||||| || || ||
Sbjct 22046 CGGAACCAGAA-ATTGAGAAAAATGGAACACCAGCTTCACCAGCAATTGCCTTAGCCAGC 22104
Query 9537 AGAGTCTTACCCGTACCTGG 9556
|| ||||| || || |||||
Sbjct 22105 AGTGTCTTCCCAGTGCCTGG 22124
>seq4174
Length=33674
Score = 154 bits (170), Expect = 2e-32
Identities = 266/384 (69%), Gaps = 2/384 (1%)
Strand=Plus/Plus
Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254
||||| || || || | ||| || || ||| | ||||| | ||||| || || ||
Sbjct 22944 TCAAAACGTCCAGGCCTAAGAAGAGCAGAATCCAATATATCTGCACGATTGGTGGCTGCA 23003
Query 9255 ATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATA 9314
|| |||| ||||| || | | ||||||||||||||||| ||||||||||| || | |
Sbjct 23004 ATTACAATTATACCAGTATTACCCTCAAAACCATCCATCTCGGTCAAAAGTTGATTTAGA 23063
Query 9315 GTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCA 9374
|| ||||| | ||||||||| || | | || | | | ||| | || || |||
Sbjct 23064 GTCTGTTCTCTTTCATCATTTCCTCCCCCAATGCCTGTTCCTCTTTGTCTCCCAACAGCA 23123
Query 9375 TCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCG 9434
||||| || |||| || |||||||| ||| ||| || || ||| || |||||
Sbjct 23124 TCAATTTCGTCAACAAAAACAATACAAGGTGCATTCTCTTTTGCCTTTTTGAAAAGATCA 23183
Query 9435 CGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG- 9493
|| || | | || || ||||||||||||||||| ||||| | || | ||| || |
Sbjct 23184 CGGACTCGTGAAGCACCGACACCAACAAACATCTCAACAAATTCTGATCCCGAA-ATAGA 23242
Query 9494 GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACC 9553
|| || ||||| || ||||| ||||| ||| || ||||||||||| || || ||
Sbjct 23243 GAAAAATGGGACTCCAGCCTCACCTGCAATAGCTTTAGCAAGAAGAGTCTTTCCAGTCCC 23302
Query 9554 TGGCTTACCCGCGAGGAGGGCACC 9577
||| ||| | ||||| ||||
Sbjct 23303 TGGAGGACCAACAAGGAGAACACC 23326
>seq32078
Length=1569
Score = 132 bits (146), Expect = 6e-26
Identities = 163/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||||||||| || ||||| || || || || |||||| || || |||||||| ||
Sbjct 1134 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCC 1075
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
||||||||| | ||| | || | ||| || || |||||||||||||||||||| || ||
Sbjct 1074 CCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCA 1015
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464
||||| || | | ||||||||| ||||||| ||| | || | ||| || ||
Sbjct 1014 GGCAAAGGCGACGATGCGCTCGGCAAAGGAGCTCGAC---GAGTGGATCCAACGCAGAGC 958
Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
||| | |||||||| | | || || || |||| ||| ||
Sbjct 957 CCAGTCGGCCTTCTTTCCGACGCAGGGGACGGTTTCGATCGC 916
>seq70
Length=129315
Score = 131 bits (144), Expect = 2e-25
Identities = 280/411 (68%), Gaps = 13/411 (3%)
Strand=Plus/Plus
Query 9240 CGATTCGTCGCGGCGATGACAACAATACC--TGTTTCATTATCAAAACCATCCATCTCTG 9297
|| || || || || || |||| | ||| |||||| || |||| ||||||||||| |
Sbjct 36480 CGGTTTGTAGCTGCAATAACAATGACACCAGTGTTTCCTT--CAAAGCCATCCATCTCAG 36537
Query 9298 TCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACT 9355
| || || ||||||| |||||||| | |||||||| | | | | | || || |
Sbjct 36538 TTAAGAGCTGGTTAAGCGTTTGTTCTCTCTCATCATTTCCA--CCTCCAATTCCTGCTCC 36595
Query 9356 GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCG 9415
| |||| |||| || |||||||| ||||||| ||| ||||| |||||| ||||||
Sbjct 36596 TCTTTGCCTTCCAACTGCATCAATTTCATCAACGAAAACAATGCATGGTGCATTTTCTTT 36655
Query 9416 GGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475
||| | | || || || ||||| ||| || || || || ||||||||||| |||||
Sbjct 36656 GGCCTTCTTGAAAAGTTCACGAACTCTTGAAGCACCAACGCCGACAAACATCTCTACAAA 36715
Query 9476 GTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 9534
| | | ||| |||| || || || ||| || |||||| || || || || |
Sbjct 36716 CTCAGAACCTGAA-ATTGAGAAAAATGGAACACCAGCTTCACCGGCGATTGCCTTAGCCA 36774
Query 9535 GAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGC 9594
| || ||||| || ||||| || ||| | || || |||| ||||| || |
Sbjct 36775 GCAGTGTCTTCCCAGTACCCGGAGGACCAACAAGAAGAACACCTTTAGGAATTCGTGCAC 36834
Query 9595 CACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCA 9645
| | || | | ||||| |||| ||| ||||| || |||| ||||||
Sbjct 36835 CGACTGCAGTGAACCTCTCTGGTTTCTTCAGAAATTCTACAA---CTTCCA 36882
>seq7765
Length=42474
Score = 129 bits (142), Expect = 7e-25
Identities = 162/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||| ||||| || ||||| || || || || |||||| || || |||||||| ||
Sbjct 40049 GTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCC 40108
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
||||||||| | ||| | || | ||| || || |||||||||||||||||||| || ||
Sbjct 40109 CCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCA 40168
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464
||||| || | | ||||||||| ||||||| ||| | || | ||| || ||
Sbjct 40169 GGCAAAGGCGACGATGCGCTCGGCAAAGGAGCTCGAC---GAGTGGATCCAACGCAGAGC 40225
Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
||| | |||||||| | | || || || |||| ||| ||
Sbjct 40226 CCAGTCGGCCTTCTTTCCGACGCAGGGGACGGTTTCGATCGC 40267
>seq2510
Length=43382
Score = 127 bits (140), Expect = 2e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||| ||||| || ||||| || || || || |||||| ||| || |||||||| ||
Sbjct 21228 GTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTTAGCCCAGGCATGAGGCC 21169
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || | |||||| || |||||||||||||||||||| || ||
Sbjct 21168 TCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATACCCTCGACGCA 21109
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434
||||| || | | ||||||||| |||||
Sbjct 21108 GGCAAAGGCGACGATGCGCTCGGCAAAGGA 21079
>seq5771
Length=39350
Score = 120 bits (132), Expect = 4e-22
Identities = 255/376 (68%), Gaps = 16/376 (4%)
Strand=Plus/Minus
Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341
|| || |||||||||||||| || || || ||||| ||||| | ||| || ||| || |
Sbjct 4001 AACCCGTCCATCTCTGTCAAGAGCTGATTGATAGTCTGTTCTCTTTCGTCGTTCCCT--C 3944
Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399
| | | ||||||| || ||| |||| || |||||||| || || ||||| ||||| |
Sbjct 3943 CTCCAAGTCCAGCACCACGCTGCCTTCCGACAGCATCAATTTCGTCTATGAACACAATGC 3884
Query 9400 ATGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454
| || | |||||| || | || || | || || |||||| ||| || ||
Sbjct 3883 AGGGGGCCTTGGATTTT-----GCCTTCTCGAACAAGTCACGGACCCTTGAGGCACCGAC 3829
Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514
|| || |||| ||| || || | | || | |||| || |||||| || | ||
Sbjct 3828 CCCCACGAACAGCTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCTGCCTC 3769
Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574
|| || | || ||||| |||||||||||||| || || ||| || | |||| |||
Sbjct 3768 CCCGGCCACCGCCCGGGCCAGAAGAGTCTTACCGGTTCCCGGCGGCCCGACCAGGA-GGC 3710
Query 9575 ACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633
| ||| | || || || || ||| | ||| | ||||| | |||||| || ||||
Sbjct 3709 AGCCCTTGGGGATTTTCGCTCCAAGCGCCGTGTACTTGTCAGGGTTCTTGAGGAAGTCCA 3650
Query 9634 CAATCTCTTCCAATTC 9649
| | ||| | ||| ||
Sbjct 3649 CCACCTCCTGCAACTC 3634
>seq2656
Length=42395
Score = 118 bits (130), Expect = 1e-21
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||| ||||| || || || || || || || ||||| ||||| |||||||| ||
Sbjct 41680 GTGGAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAACGTGAGGCCAGGCATGAGTCC 41739
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || |||||||| || |||||||||||||| || || || ||
Sbjct 41740 GCGCTTCTTGAGCCAGAAGATTGCGCAGAAGGAGCCGGAGAAGAAGATGCCTTCGACGCA 41799
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434
|| || |||| |||||||||||| ||||
Sbjct 41800 GGCGAAGGCAACGAGGCGCTCGGCGTAGGA 41829
>seq992
Length=120957
Score = 95.1 bits (104), Expect = 1e-14
Identities = 249/375 (66%), Gaps = 14/375 (4%)
Strand=Plus/Minus
Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341
|| ||||||||||||||||| || || || || || || || | || || || | |
Sbjct 3160 AACCCATCCATCTCTGTCAATAGCTGATTGATTGTCTGCTCTCTCTCGTCGTTTCCA--C 3103
Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399
| | | || |||| || ||| ||||||| |||||||| ||||| ||||| ||||| |
Sbjct 3102 CTCCAAGCCCGGCACCACGCTGCCTTCCCACAGCATCAATTTCATCTATGAACACAATGC 3043
Query 9400 ATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455
| || || |||||| | || || | || || || || ||| |||||
Sbjct 3042 AGGGGGCCTTCGATTTCGCCTTC----TCGAACAAGTCCCGGACTCTCGAGGCACCCACT 2987
Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9515
|| ||||||| || || || | | || | |||| || |||||| || | ||
Sbjct 2986 CCCACAAACAATTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCGGCCTCC 2927
Query 9516 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 9575
|| || | || | ||| || ||||||||||| || || ||| || | | || ||||
Sbjct 2926 CCGGCCACTGCCCTGGCCAGCAGAGTCTTACCAGTTCCGGGCGGCCCGACCAAGA-GGCA 2868
Query 9576 CCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634
||| | || ||||| || || | | ||| | ||||| | |||||| ||||||||
Sbjct 2867 GCCCTTGGGGATCTTTGCTCCGAGTGCGGTGTACTTGTCAGGGTTCTTGAGGAAATCCAC 2808
Query 9635 AATCTCTTCCAATTC 9649
| ||| | ||| ||
Sbjct 2807 CACCTCCTGCAACTC 2793
>seq3117
Length=39173
Score = 86.0 bits (94), Expect = 7e-12
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
|| ||||| ||||||||||| ||||| || || || | |||| | || | ||| |||
Sbjct 13433 GCAATTGAAGCCAAATTGCAGACAGCAGTTTCTTCAGGACTTGTGAATTCAAGAATCTCT 13492
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| |||||||| ||| ||| || || || | ||| | ||||||||| ||| |||| |||
Sbjct 13493 GTGCACAAGTTTGAAGACTTGATAGTTCCAAGATTTTGTTGGTTACTTTTTCTGTTACAC 13552
Query 106583 GCATCCT 106589
| ||||
Sbjct 13553 GTGTCCT 13559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589683700418640
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