Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4514 159 4e-34 seq4174 154 2e-32 seq32078 132 6e-26 seq70 131 2e-25 seq7765 129 7e-25 seq2510 127 2e-24 seq5771 120 4e-22 seq2656 118 1e-21 seq992 95.1 1e-14 seq3117 86.0 7e-12 >seq4514 Length=32024 Score = 159 bits (176), Expect = 4e-34 Identities = 230/320 (72%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 9240 CGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAAAACCATCCATCTCTG 9297 || || || || || ||||||| ||||| || ||| || |||| ||||||||||| | Sbjct 21808 CGGTTTGTAGCAGCAATGACAATGATACCAGTATTTCCTT--CAAAGCCATCCATCTCAG 21865 Query 9298 TCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC 9357 | || || ||||||| |||||||||| ||||||||| | | ||| | | | Sbjct 21866 TTAAGAGCTGGTTAAGTGTTTGTTCCCTTTCATCATTTCCACCTCCAATACCTGTTCCTC 21925 Query 9358 GTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGG 9417 |||| |||| || |||||||||||||||| ||| ||||| |||||| |||||| || Sbjct 21926 TTTGCCTTCCAACAGCATCAATCTCATCAACGAAAACAATGCATGGTGCATTTTCTTTGG 21985 Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477 | | | || ||||| ||||| ||| || || ||||||||||||||||| ||||| | Sbjct 21986 CCTTCTTGAAAAGATCACGAACTCTTGAAGCACCAACACCAACAAACATCTCTACAAACT 22045 Query 9478 TTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536 | | ||| |||| || || || ||| || |||||| ||||| || || || Sbjct 22046 CGGAACCAGAA-ATTGAGAAAAATGGAACACCAGCTTCACCAGCAATTGCCTTAGCCAGC 22104 Query 9537 AGAGTCTTACCCGTACCTGG 9556 || ||||| || || ||||| Sbjct 22105 AGTGTCTTCCCAGTGCCTGG 22124 >seq4174 Length=33674 Score = 154 bits (170), Expect = 2e-32 Identities = 266/384 (69%), Gaps = 2/384 (1%) Strand=Plus/Plus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 ||||| || || || | ||| || || ||| | ||||| | ||||| || || || Sbjct 22944 TCAAAACGTCCAGGCCTAAGAAGAGCAGAATCCAATATATCTGCACGATTGGTGGCTGCA 23003 Query 9255 ATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATA 9314 || |||| ||||| || | | ||||||||||||||||| ||||||||||| || | | Sbjct 23004 ATTACAATTATACCAGTATTACCCTCAAAACCATCCATCTCGGTCAAAAGTTGATTTAGA 23063 Query 9315 GTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCA 9374 || ||||| | ||||||||| || | | || | | | ||| | || || ||| Sbjct 23064 GTCTGTTCTCTTTCATCATTTCCTCCCCCAATGCCTGTTCCTCTTTGTCTCCCAACAGCA 23123 Query 9375 TCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCG 9434 ||||| || |||| || |||||||| ||| ||| || || ||| || ||||| Sbjct 23124 TCAATTTCGTCAACAAAAACAATACAAGGTGCATTCTCTTTTGCCTTTTTGAAAAGATCA 23183 Query 9435 CGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG- 9493 || || | | || || ||||||||||||||||| ||||| | || | ||| || | Sbjct 23184 CGGACTCGTGAAGCACCGACACCAACAAACATCTCAACAAATTCTGATCCCGAA-ATAGA 23242 Query 9494 GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACC 9553 || || ||||| || ||||| ||||| ||| || ||||||||||| || || || Sbjct 23243 GAAAAATGGGACTCCAGCCTCACCTGCAATAGCTTTAGCAAGAAGAGTCTTTCCAGTCCC 23302 Query 9554 TGGCTTACCCGCGAGGAGGGCACC 9577 ||| ||| | ||||| |||| Sbjct 23303 TGGAGGACCAACAAGGAGAACACC 23326 >seq32078 Length=1569 Score = 132 bits (146), Expect = 6e-26 Identities = 163/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || ||||| || || || || |||||| || || |||||||| || Sbjct 1134 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCC 1075 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 ||||||||| | ||| | || | ||| || || |||||||||||||||||||| || || Sbjct 1074 CCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCA 1015 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 ||||| || | | ||||||||| ||||||| ||| | || | ||| || || Sbjct 1014 GGCAAAGGCGACGATGCGCTCGGCAAAGGAGCTCGAC---GAGTGGATCCAACGCAGAGC 958 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||| | |||||||| | | || || || |||| ||| || Sbjct 957 CCAGTCGGCCTTCTTTCCGACGCAGGGGACGGTTTCGATCGC 916 >seq70 Length=129315 Score = 131 bits (144), Expect = 2e-25 Identities = 280/411 (68%), Gaps = 13/411 (3%) Strand=Plus/Plus Query 9240 CGATTCGTCGCGGCGATGACAACAATACC--TGTTTCATTATCAAAACCATCCATCTCTG 9297 || || || || || || |||| | ||| |||||| || |||| ||||||||||| | Sbjct 36480 CGGTTTGTAGCTGCAATAACAATGACACCAGTGTTTCCTT--CAAAGCCATCCATCTCAG 36537 Query 9298 TCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACT 9355 | || || ||||||| |||||||| | |||||||| | | | | | || || | Sbjct 36538 TTAAGAGCTGGTTAAGCGTTTGTTCTCTCTCATCATTTCCA--CCTCCAATTCCTGCTCC 36595 Query 9356 GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCG 9415 | |||| |||| || |||||||| ||||||| ||| ||||| |||||| |||||| Sbjct 36596 TCTTTGCCTTCCAACTGCATCAATTTCATCAACGAAAACAATGCATGGTGCATTTTCTTT 36655 Query 9416 GGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 ||| | | || || || ||||| ||| || || || || ||||||||||| ||||| Sbjct 36656 GGCCTTCTTGAAAAGTTCACGAACTCTTGAAGCACCAACGCCGACAAACATCTCTACAAA 36715 Query 9476 GTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 9534 | | | ||| |||| || || || ||| || |||||| || || || || | Sbjct 36716 CTCAGAACCTGAA-ATTGAGAAAAATGGAACACCAGCTTCACCGGCGATTGCCTTAGCCA 36774 Query 9535 GAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGC 9594 | || ||||| || ||||| || ||| | || || |||| ||||| || | Sbjct 36775 GCAGTGTCTTCCCAGTACCCGGAGGACCAACAAGAAGAACACCTTTAGGAATTCGTGCAC 36834 Query 9595 CACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCA 9645 | | || | | ||||| |||| ||| ||||| || |||| |||||| Sbjct 36835 CGACTGCAGTGAACCTCTCTGGTTTCTTCAGAAATTCTACAA---CTTCCA 36882 >seq7765 Length=42474 Score = 129 bits (142), Expect = 7e-25 Identities = 162/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || ||||| || || || || |||||| || || |||||||| || Sbjct 40049 GTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCC 40108 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 ||||||||| | ||| | || | ||| || || |||||||||||||||||||| || || Sbjct 40109 CCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCA 40168 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 ||||| || | | ||||||||| ||||||| ||| | || | ||| || || Sbjct 40169 GGCAAAGGCGACGATGCGCTCGGCAAAGGAGCTCGAC---GAGTGGATCCAACGCAGAGC 40225 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||| | |||||||| | | || || || |||| ||| || Sbjct 40226 CCAGTCGGCCTTCTTTCCGACGCAGGGGACGGTTTCGATCGC 40267 >seq2510 Length=43382 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || ||||| || || || || |||||| ||| || |||||||| || Sbjct 21228 GTGGAGTCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTTAGCCCAGGCATGAGGCC 21169 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | |||||| || |||||||||||||||||||| || || Sbjct 21168 TCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATACCCTCGACGCA 21109 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 ||||| || | | ||||||||| ||||| Sbjct 21108 GGCAAAGGCGACGATGCGCTCGGCAAAGGA 21079 >seq5771 Length=39350 Score = 120 bits (132), Expect = 4e-22 Identities = 255/376 (68%), Gaps = 16/376 (4%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || || |||||||||||||| || || || ||||| ||||| | ||| || ||| || | Sbjct 4001 AACCCGTCCATCTCTGTCAAGAGCTGATTGATAGTCTGTTCTCTTTCGTCGTTCCCT--C 3944 Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399 | | | ||||||| || ||| |||| || |||||||| || || ||||| ||||| | Sbjct 3943 CTCCAAGTCCAGCACCACGCTGCCTTCCGACAGCATCAATTTCGTCTATGAACACAATGC 3884 Query 9400 ATGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 | || | |||||| || | || || | || || |||||| ||| || || Sbjct 3883 AGGGGGCCTTGGATTTT-----GCCTTCTCGAACAAGTCACGGACCCTTGAGGCACCGAC 3829 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514 || || |||| ||| || || | | || | |||| || |||||| || | || Sbjct 3828 CCCCACGAACAGCTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCTGCCTC 3769 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 || || | || ||||| |||||||||||||| || || ||| || | |||| ||| Sbjct 3768 CCCGGCCACCGCCCGGGCCAGAAGAGTCTTACCGGTTCCCGGCGGCCCGACCAGGA-GGC 3710 Query 9575 ACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 | ||| | || || || || ||| | ||| | ||||| | |||||| || |||| Sbjct 3709 AGCCCTTGGGGATTTTCGCTCCAAGCGCCGTGTACTTGTCAGGGTTCTTGAGGAAGTCCA 3650 Query 9634 CAATCTCTTCCAATTC 9649 | | ||| | ||| || Sbjct 3649 CCACCTCCTGCAACTC 3634 >seq2656 Length=42395 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || || || || || || || ||||| ||||| |||||||| || Sbjct 41680 GTGGAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAACGTGAGGCCAGGCATGAGTCC 41739 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || |||||||| || |||||||||||||| || || || || Sbjct 41740 GCGCTTCTTGAGCCAGAAGATTGCGCAGAAGGAGCCGGAGAAGAAGATGCCTTCGACGCA 41799 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || || |||| |||||||||||| |||| Sbjct 41800 GGCGAAGGCAACGAGGCGCTCGGCGTAGGA 41829 >seq992 Length=120957 Score = 95.1 bits (104), Expect = 1e-14 Identities = 249/375 (66%), Gaps = 14/375 (4%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || ||||||||||||||||| || || || || || || || | || || || | | Sbjct 3160 AACCCATCCATCTCTGTCAATAGCTGATTGATTGTCTGCTCTCTCTCGTCGTTTCCA--C 3103 Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399 | | | || |||| || ||| ||||||| |||||||| ||||| ||||| ||||| | Sbjct 3102 CTCCAAGCCCGGCACCACGCTGCCTTCCCACAGCATCAATTTCATCTATGAACACAATGC 3043 Query 9400 ATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 | || || |||||| | || || | || || || || ||| ||||| Sbjct 3042 AGGGGGCCTTCGATTTCGCCTTC----TCGAACAAGTCCCGGACTCTCGAGGCACCCACT 2987 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9515 || ||||||| || || || | | || | |||| || |||||| || | || Sbjct 2986 CCCACAAACAATTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCGGCCTCC 2927 Query 9516 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 9575 || || | || | ||| || ||||||||||| || || ||| || | | || |||| Sbjct 2926 CCGGCCACTGCCCTGGCCAGCAGAGTCTTACCAGTTCCGGGCGGCCCGACCAAGA-GGCA 2868 Query 9576 CCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 ||| | || ||||| || || | | ||| | ||||| | |||||| |||||||| Sbjct 2867 GCCCTTGGGGATCTTTGCTCCGAGTGCGGTGTACTTGTCAGGGTTCTTGAGGAAATCCAC 2808 Query 9635 AATCTCTTCCAATTC 9649 | ||| | ||| || Sbjct 2807 CACCTCCTGCAACTC 2793 >seq3117 Length=39173 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || ||||| ||||||||||| ||||| || || || | |||| | || | ||| ||| Sbjct 13433 GCAATTGAAGCCAAATTGCAGACAGCAGTTTCTTCAGGACTTGTGAATTCAAGAATCTCT 13492 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || |||||||| ||| ||| || || || | ||| | ||||||||| ||| |||| ||| Sbjct 13493 GTGCACAAGTTTGAAGACTTGATAGTTCCAAGATTTTGTTGGTTACTTTTTCTGTTACAC 13552 Query 106583 GCATCCT 106589 | |||| Sbjct 13553 GTGTCCT 13559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589683700418640