Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3117 104 3e-17 >seq3117 Length=39173 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||| | ||| | ||||||| || |||| || | ||| || ||||| ||| Sbjct 14555 CCTCCTTGATCAACATAACGTGCAGTATCATTGAAAACCCTCAGCATAGGAACAATGCCA 14614 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| || || || ||||| || | |||| || || || |||| Sbjct 14615 TTAGATGTTCCATTTGTACCACGGATGTAACTACCTGTTGCTCGGATGTTGTGAACTGAA 14674 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || || || || || || ||||| ||||||| ||||| |||||||| || Sbjct 14675 ACTCCAATTCCTCCAGCAGACTTGCTTATTATAGCACACTCCTTAAGAGTATCATAGATG 14734 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 || || || ||||||||| |||| || || ||||||||| Sbjct 14735 CCCTCAATGCTATCATCTTTCATGCATATCAGGAAACAACTA 14776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561825736061040