Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq3117 104 3e-17
>seq3117
Length=39173
Score = 104 bits (114), Expect = 3e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419
||||||||||| | ||| | ||||||| || |||| || | ||| || ||||| |||
Sbjct 14555 CCTCCTTGATCAACATAACGTGCAGTATCATTGAAAACCCTCAGCATAGGAACAATGCCA 14614
Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479
|| ||| | ||||| || || || ||||| || | |||| || || || ||||
Sbjct 14615 TTAGATGTTCCATTTGTACCACGGATGTAACTACCTGTTGCTCGGATGTTGTGAACTGAA 14674
Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539
| || || || || || || ||||| ||||||| ||||| |||||||| ||
Sbjct 14675 ACTCCAATTCCTCCAGCAGACTTGCTTATTATAGCACACTCCTTAAGAGTATCATAGATG 14734
Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581
|| || || ||||||||| |||| || || |||||||||
Sbjct 14735 CCCTCAATGCTATCATCTTTCATGCATATCAGGAAACAACTA 14776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561825736061040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |