Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 120 2e-22
seq490 118 8e-22
seq220 111 1e-19
seq410 91.5 1e-13
>seq2385
Length=44452
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | || || || || || || || || ||||| || |||| || | | |
Sbjct 34258 ACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCC 34199
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||| ||||| ||||| || ||||||||||| || || || || ||||| || ||
Sbjct 34198 ATCCTCCAACTGCTTGCCTGCGAAGATCAAACGCTGCTGGTCTGGGGGGATGCCCTCCTT 34139
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || || ||| | |||| ||| || || | || || ||||||||||
Sbjct 34138 GTCCTGTATCTTGGCCTTGACATTGTCTATAGTATCTGAAGACTCAACCTCAAGAGTGAT 34079
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482
|| ||||| || || || || || || ||||||||| | | ||||||
Sbjct 34078 TGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGCCTCCACGAAGA 34030
>seq490
Length=81643
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | ||| ||||| || || ||||| |||||||| || || | || | |||| ||
Sbjct 59723 AACCAGATGCAGGGTTGACTCCTTTTGAATATTGTAGTCTGCTAGGGTGCGCCCATCCTC 59664
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || ||||| || | | |||||| || || |||||||| ||||| || ||
Sbjct 59663 AAGCTGCTTCCCCGCAAAGATGAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTGTCCTG 59604
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||||| || ||| | || | ||||| || | ||| || ||||| || | || ||
Sbjct 59603 AATTTTTGCCTTGACATTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTTATGGTCTT 59544
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || | ||| || || |||||||||||
Sbjct 59543 GCCAGTCAGAGTCTTGACGAATATCTGCAT 59514
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || || ||||| || ||||| || || | || | |||| |||||||||
Sbjct 58804 TGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGACCATCCTCCAATTGC 58745
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||| |||| |||||| || || || || || || || || || || || ||
Sbjct 58744 TTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTG 58685
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||| || || | || || |||||||||| || ||||| ||
Sbjct 58684 GCCTTGACATTGTCAATAGTATCTGAAGACTCAACCTCAAGAGTGATTGTCTTGCCTGTC 58625
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
|| || || ||||| |||||||||
Sbjct 58624 AAGGTCTTCACAAAGATCTGCATG 58601
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || |||||||| || || || |||||||| || | || | |||| || | |||
Sbjct 59260 TGGAGTGTAGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCGAGCTGC 59201
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| ||||||||||| | | || || || || |||||||| || || || ||||| |||
Sbjct 59200 TTCCCTGCAAATATGAGTCTTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTT 59141
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| |||| ||| || ||||| || | || || || ||
Sbjct 59140 GCCTTGACGTTGTCAATGGTGTCTGACGATTCAACCTCAAGGGTAATAGTCTTACCAGTC 59081
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||||||||||||
Sbjct 59080 AAGGTCTTAACAAATATCTGCAT 59058
>seq220
Length=196394
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || ||||||||||| || || || ||||| || || | ||| | |||| ||
Sbjct 149018 ACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGCCCATCCTCG 149077
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||||| || || || | | ||| ||||| || ||||||||||| || || |||
Sbjct 149078 AGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGA 149137
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || |||||| | || | ||||| || | || || || || |||| ||| |||
Sbjct 149138 ATCTTCGCCTTTACATTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTGATCGTCTTG 149197
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| ||||||||
Sbjct 149198 CCAGTGAGGGTCTTGACAAAGATCTGCAT 149226
>seq410
Length=85275
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || || || || || || ||||||||||||| || | | || || | |||
Sbjct 46571 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGCGAGTGTGCGTCCGTCCTCGAGCTGC 46512
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | |||||||| || ||||| || || || || || || || ||
Sbjct 46511 TTGCCGGCGAAGATGAGCCGCTGTTGGTCCGGCGGTATTCCCTCCTTGTCCTGGATCTTC 46452
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||||| ||||| |||| ||| || |||||
Sbjct 46451 GCCTTCACGTTGTCGATGGTGTCCGATGACTCCACCTCAAGGGTGATCGTCTTCCCGGTG 46392
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||| || || || ||||||||
Sbjct 46391 AGAGTCTTCACGAAGATCTGCAT 46369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396083833002102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |