Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq2845 86.0 1e-11 seq1579 86.0 1e-11 seq297 86.0 1e-11 >seq2845 Length=54259 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/85 (84%), Gaps = 5/85 (6%) Strand=Plus/Plus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 1009 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 1065 Query 324480 AATCCCACCTCCGCATCCAATTTTA 324504 ||||| ||||||| | |||||| Sbjct 1066 AATCCTGTCTCCGCAAC--ATTTTA 1088 >seq1579 Length=164942 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/85 (84%), Gaps = 5/85 (6%) Strand=Plus/Plus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 156004 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 156060 Query 324480 AATCCCACCTCCGCATCCAATTTTA 324504 ||||| ||||||| | |||||| Sbjct 156061 AATCCTGTCTCCGCAAC--ATTTTA 156083 >seq297 Length=119073 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/85 (84%), Gaps = 5/85 (6%) Strand=Plus/Minus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 2321 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 2265 Query 324480 AATCCCACCTCCGCATCCAATTTTA 324504 ||||| ||||||| | |||||| Sbjct 2264 AATCCTGTCTCCGCAAC--ATTTTA 2242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146998054718428