Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq2845 86.0 1e-11
seq1579 86.0 1e-11
seq297 86.0 1e-11
>seq2845
Length=54259
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/85 (84%), Gaps = 5/85 (6%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||
Sbjct 1009 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 1065
Query 324480 AATCCCACCTCCGCATCCAATTTTA 324504
||||| ||||||| | ||||||
Sbjct 1066 AATCCTGTCTCCGCAAC--ATTTTA 1088
>seq1579
Length=164942
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/85 (84%), Gaps = 5/85 (6%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||
Sbjct 156004 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 156060
Query 324480 AATCCCACCTCCGCATCCAATTTTA 324504
||||| ||||||| | ||||||
Sbjct 156061 AATCCTGTCTCCGCAAC--ATTTTA 156083
>seq297
Length=119073
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/85 (84%), Gaps = 5/85 (6%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||
Sbjct 2321 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 2265
Query 324480 AATCCCACCTCCGCATCCAATTTTA 324504
||||| ||||||| | ||||||
Sbjct 2264 AATCCTGTCTCCGCAAC--ATTTTA 2242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1146998054718428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |