Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2656 197 3e-45 seq32078 183 6e-41 seq7765 183 6e-41 seq2510 176 8e-39 >seq2656 Length=42395 Score = 197 bits (218), Expect = 3e-45 Identities = 558/847 (66%), Gaps = 29/847 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || || ||||| |||||||| |||||||||| || ||| ||| ||| Sbjct 41377 CTGGTACTCGCCAACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGATATGAGCTC 41436 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGC---CCATCTGTTCCAG 47955 ||| || ||| || || || | ||| | | | || | | | | |||| Sbjct 41437 CATCCAGTCGAACGGATTTGGGACGCCATAGAT---TTTGCTGCAATCGAGCGCTCCCAG 41493 Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 ||| |||| || ||| |||||||||||| ||| || |||||| |||| || Sbjct 41494 CAGCCGATCGGCTACGAACTCGATGTATTGACTCATCAGCTCCCCGTTCATCCCTACAAG 41553 Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 | ||| |||| ||| | || |||||| ||| || | || || || || || Sbjct 41554 CGCCACAGGCAGAGCGTCGCAGACGAACTCCCGCTCAATGTCGACCGCCTCTTTGACGAT 41613 Query 48076 CTGCTTAACGCGGGACTCTGAGGGT---TTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 ||| | |||| ||| |||||| ||| | || ||||| | ||| Sbjct 41614 GGATCTAATCCT---CTCTTCGGGCAACTTGTTGTTGAGGAGGCTG---TAGAGAAGGCA 41667 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||| ||||| | ||| | ||| ||||| || ||||||| |||||||||| ||| || Sbjct 41668 GGCGAAGTCGCAGTGGAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAACGTGAGGCC 41727 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 |||||||| || | || ||||||||||| ||||| ||| ||||| ||||||||||| Sbjct 41728 AGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATTGCGCAGAAGGAGCCGGAGAAGAAGAT 41787 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 ||| || || ||||| || ||| | ||| || | ||| | | | | ||| Sbjct 41788 GCCTTCGACGCAGGCGAAGGCAACGAGGCGCTCGGCGTAGGAATCCGAC--GAACG-GAT 41844 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| | ||||||||| |||||||| || ||| || | ||||| || |||||||| Sbjct 41845 CCAGCGGACCGCCCAGTCGGCCTTCTTGCCGACGCAGGGGACGGTCTCGATCGCCCGGAA 41904 Query 48373 GA---GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 || | |||| ||| | | |||| | ||| | ||| || | |||||| Sbjct 41905 GAGGCGGGTCTT---CTCGTCCGGGTCCTTGATATAAGACTCGAGGAGGAGGGAGTACAT 41961 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || || |||||||||||||||||||| | ||||| | Sbjct 41962 CTCGGAGTGGATGTTCTCGATGGCAATCTGGAACCCGTAGAAGGCGCGCGCCTCCGGGAG 42021 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 |||||| || | ||| | | || ||||| || || || || || || || Sbjct 42022 CTGCACGTCGTTCATGAACCGGGCGGCGAGGTTCTCGAGAACGATGCCGTCGGAGGCGGC 42081 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609 |||||||| ||||| || | ||| ||||| |||| || || || | | | |||| Sbjct 42082 GAAGAAGGCGAGGACGTGGGAGATGAAGTGGCGATCGTCGTCCGTCAG-GGAGTTGAGCC 42140 Query 48610 -CTGTACGTCTTTGCC---CAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || || | ||| ||||| ||||||||| |||||||| || || | || | Sbjct 42141 AGTGGCCGAGGTCGCCGGAGAGGTCGACTTCTTCCGTCGTCCAGAAAGATGCTACCGCCT 42200 Query 48666 TTTTGTA 48672 | ||||| Sbjct 42201 TCTTGTA 42207 >seq32078 Length=1569 Score = 183 bits (202), Expect = 6e-41 Identities = 400/585 (68%), Gaps = 27/585 (5%) Strand=Plus/Minus Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 ||||||| |||| | || ||||| | |||||| ||||| | ||| | || ||||| Sbjct 1176 TTTGTTGTTCAGGAGGCTG---TAGAGGAGGCAGGCGAAGTCGCAGTGGAGACCCTCGTC 1120 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 ||| ||||||| ||||||||||| ||| |||||||||| |||| || |||||||| Sbjct 1119 ACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCCCCGCTTCTTGAGCCA 1060 Query 48220 GAAAATTGCCGCGAAAG-AGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGA 48278 ||| || | || |||| |||| ||||||||||| ||||| || || || ||| || Sbjct 1059 GAAGATGGA-GCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGA 1001 Query 48279 GCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 | ||| | |||| ||| | | || |||||| || |||||||| ||||||| Sbjct 1000 TGCGCTCGGC-AAAGGAGC-TCGACGAGTG-GATCCAACGCAGAGCCCAGTCGGCCTTCT 944 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395 | || ||| || | || || || || ||||||| || ||| ||| | | || Sbjct 943 TTCCGACGCAGGGGACGGTTTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGAGT 887 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 || | ||||| ||| || | ||||||||| ||||| | ||||| || |||| Sbjct 886 CCTTGATGTAGGTCTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCGA 827 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||||||| ||||||||||| | |||||| || ||||| || | ||| | || Sbjct 826 TCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGCCG 768 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || || ||||| ||| || || || || || || |||||||| ||||| || | | Sbjct 767 GCGAGGTTCTCGAGGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACG 708 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCCCTGTACG---TCTTTGCCCAG 48627 || ||||||||| | | |||| || |||||| || ||| || | || Sbjct 707 AAGCGGCGCTCGTCGGCGTTGAG-GCGGTTGTTCCAG---TGGACGAGATCAGCGGAGAG 652 Query 48628 GTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 ||| || || ||| | ||||||||||| || | || || ||||| Sbjct 651 GTCGACCTCCTCCGCGGTCCAGAAGGAGGCAACCGCCTTCTTGTA 607 >seq7765 Length=42474 Score = 183 bits (202), Expect = 6e-41 Identities = 400/585 (68%), Gaps = 27/585 (5%) Strand=Plus/Plus Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 ||||||| |||| | || ||||| | |||||| ||||| | ||| | || ||||| Sbjct 40007 TTTGTTGTTCAGGAGGCTG---TAGAGGAGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTC 40063 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 ||| ||||||| ||||||||||| ||| |||||||||| |||| || |||||||| Sbjct 40064 ACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCCCCGCTTCTTGAGCCA 40123 Query 48220 GAAAATTGCCGCGAAA-GAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGA 48278 ||| | || || ||| ||||| ||||||||||| ||||| || || || ||| || Sbjct 40124 GAAGA-TGGAGCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGA 40182 Query 48279 GCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 | ||| | |||| ||| | | || |||||| || |||||||| ||||||| Sbjct 40183 TGCGCTCGGC-AAAGGAGC-TCGACGAGTG-GATCCAACGCAGAGCCCAGTCGGCCTTCT 40239 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395 | || ||| || | || || || || ||||||| || ||| ||| | | || Sbjct 40240 TTCCGACGCAGGGGACGGTTTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGAGT 40296 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 || | ||||| ||| || | ||||||||| ||||| | ||||| || |||| Sbjct 40297 CCTTGATGTAGGTCTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCGA 40356 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||||||| ||||||||||| | |||||| || ||||| || | ||| | || Sbjct 40357 TCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGCCG 40415 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || || ||||| ||| || || || || || || |||||||| ||||| || | | Sbjct 40416 GCGAGGTTCTCGAGGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACG 40475 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCCCTGTACG---TCTTTGCCCAG 48627 || ||||||||| | | |||| || |||||| || ||| || | || Sbjct 40476 AAGCGGCGCTCGTCGGCGTTGAG-GCGGTTGTTCCAG---TGGACGAGATCAGCGGAGAG 40531 Query 48628 GTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 ||| || || ||| | ||||||||||| || | || || ||||| Sbjct 40532 GTCGACCTCCTCCGCGGTCCAGAAGGAGGCAACCGCCTTCTTGTA 40576 >seq2510 Length=43382 Score = 176 bits (194), Expect = 8e-39 Identities = 397/587 (68%), Gaps = 31/587 (5%) Strand=Plus/Minus Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 ||||||| |||| | || ||||| | |||||| ||||| | ||| | || ||||| Sbjct 21270 TTTGTTGTTCAGGAGGCTG---TAGAGGAGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTC 21214 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 ||| ||||||| ||||||||||| || |||||||||| || | || |||||||| Sbjct 21213 ACGGGAGATGAGCTCGTTGGAGAAGGTTAGCCCAGGCATGAGGCCTCGCTTCTTGAGCCA 21154 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 ||| || | ||| ||||| ||||||||||| ||||| || || || ||| || Sbjct 21153 GAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGAT 21094 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTC---TGAGATCCAGGAAAGCGCCCAGTCTGCCTT 48336 | ||| | || ||| || | | || |||||| |||||||| || ||||| Sbjct 21093 GCGCTCGGCAAAGGAA-----CTCGACGAGTG-GATCCAACGCAGCGCCCACTCGGCCTT 21040 Query 48337 CTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGC 48393 ||| || ||| || | ||||| || || ||||||| || ||| ||| | | Sbjct 21039 CTTTCCGACGCAGGGGACGGTCTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGA 20983 Query 48394 GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGC 48453 |||| | ||||| ||| || | ||||||||| ||||| | ||||| || || Sbjct 20982 GTCCTTGATGTAGGTCTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGC 20923 Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 ||||||||| ||||||||||| | |||||| || ||||| || | ||| | | Sbjct 20922 GATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGC 20864 Query 48514 CAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAA 48572 | || || ||||| ||| || || || || || || |||||||| ||||| || | Sbjct 20863 CGGCGAGGTTCTCGAGGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGA 20804 Query 48573 GGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCCCTGTACG---TCTTTGCCC 48625 ||| ||||||||| | | |||| || |||||| || ||| || | Sbjct 20803 CGAAGCGGCGCTCGTCGGCGTTGAG-GCGGTTGTTCCAG---TGGACGAGATCAGCGGAG 20748 Query 48626 AGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 ||||| || || ||| | ||||||||||| || | || || ||||| Sbjct 20747 AGGTCGACCTCCTCCGCGGTCCAGAAGGAGGCAACCGCCTTCTTGTA 20701 Score = 98.7 bits (108), Expect = 2e-15 Identities = 242/359 (67%), Gaps = 11/359 (3%) Strand=Plus/Minus Query 48233 AAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAA 48292 || ||||| ||||||||||| ||||| || || || ||| || | ||| | ||| Sbjct 20391 AAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCTCGGC-AAA 20333 Query 48293 GAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGC 48352 | ||| | | || |||||| || |||||||| |||||||| || ||| || Sbjct 20332 GGAGC-TCGACGAGTG-GATCCAACGCAGAGCCCAGTCGGCCTTCTTTCCGACGCAGGGG 20275 Query 48353 ATCGTCTCTATGGCCCGGAAGAG---CTTCTTGCACTCACCTGCGTCCGCAACATAGGTA 48409 | || || || || |||||||| | ||| ||| | | |||| | ||||| Sbjct 20274 ACGGTTTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGAGTCCTTGATGTAGGTC 20218 Query 48410 GTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAG 48469 ||| || | ||||||||| ||||| | ||||| || ||||||||||| |||||| Sbjct 20217 TCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAG 20158 Query 48470 AAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATT 48528 ||||| | |||||| || ||||| || | ||| | || || || ||||| Sbjct 20157 AAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGCCGGCGAGGTTCTCGAG 20099 Query 48529 GACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGT 48587 ||| || || || || || || |||||||| ||||| || | ||| ||||||||| Sbjct 20098 GACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGCGGCGCTCGT 20040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931063703370240