Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2656 197 3e-45
seq32078 183 6e-41
seq7765 183 6e-41
seq2510 176 8e-39
>seq2656
Length=42395
Score = 197 bits (218), Expect = 3e-45
Identities = 558/847 (66%), Gaps = 29/847 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || || ||||| |||||||| |||||||||| || ||| ||| |||
Sbjct 41377 CTGGTACTCGCCAACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGATATGAGCTC 41436
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGC---CCATCTGTTCCAG 47955
||| || ||| || || || | ||| | | | || | | | | ||||
Sbjct 41437 CATCCAGTCGAACGGATTTGGGACGCCATAGAT---TTTGCTGCAATCGAGCGCTCCCAG 41493
Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
||| |||| || ||| |||||||||||| ||| || |||||| |||| ||
Sbjct 41494 CAGCCGATCGGCTACGAACTCGATGTATTGACTCATCAGCTCCCCGTTCATCCCTACAAG 41553
Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
| ||| |||| ||| | || |||||| ||| || | || || || || ||
Sbjct 41554 CGCCACAGGCAGAGCGTCGCAGACGAACTCCCGCTCAATGTCGACCGCCTCTTTGACGAT 41613
Query 48076 CTGCTTAACGCGGGACTCTGAGGGT---TTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132
||| | |||| ||| |||||| ||| | || ||||| | |||
Sbjct 41614 GGATCTAATCCT---CTCTTCGGGCAACTTGTTGTTGAGGAGGCTG---TAGAGAAGGCA 41667
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
||| ||||| | ||| | ||| ||||| || ||||||| |||||||||| ||| ||
Sbjct 41668 GGCGAAGTCGCAGTGGAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAACGTGAGGCC 41727
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
|||||||| || | || ||||||||||| ||||| ||| ||||| |||||||||||
Sbjct 41728 AGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATTGCGCAGAAGGAGCCGGAGAAGAAGAT 41787
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
||| || || ||||| || ||| | ||| || | ||| | | | | |||
Sbjct 41788 GCCTTCGACGCAGGCGAAGGCAACGAGGCGCTCGGCGTAGGAATCCGAC--GAACG-GAT 41844
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
|||| | ||||||||| |||||||| || ||| || | ||||| || ||||||||
Sbjct 41845 CCAGCGGACCGCCCAGTCGGCCTTCTTGCCGACGCAGGGGACGGTCTCGATCGCCCGGAA 41904
Query 48373 GA---GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429
|| | |||| ||| | | |||| | ||| | ||| || | ||||||
Sbjct 41905 GAGGCGGGTCTT---CTCGTCCGGGTCCTTGATATAAGACTCGAGGAGGAGGGAGTACAT 41961
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
||| ||||| | ||||| || || |||||||||||||||||||| | ||||| |
Sbjct 41962 CTCGGAGTGGATGTTCTCGATGGCAATCTGGAACCCGTAGAAGGCGCGCGCCTCCGGGAG 42021
Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
|||||| || | ||| | | || ||||| || || || || || || ||
Sbjct 42022 CTGCACGTCGTTCATGAACCGGGCGGCGAGGTTCTCGAGAACGATGCCGTCGGAGGCGGC 42081
Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609
|||||||| ||||| || | ||| ||||| |||| || || || | | | ||||
Sbjct 42082 GAAGAAGGCGAGGACGTGGGAGATGAAGTGGCGATCGTCGTCCGTCAG-GGAGTTGAGCC 42140
Query 48610 -CTGTACGTCTTTGCC---CAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| || | ||| ||||| ||||||||| |||||||| || || | || |
Sbjct 42141 AGTGGCCGAGGTCGCCGGAGAGGTCGACTTCTTCCGTCGTCCAGAAAGATGCTACCGCCT 42200
Query 48666 TTTTGTA 48672
| |||||
Sbjct 42201 TCTTGTA 42207
>seq32078
Length=1569
Score = 183 bits (202), Expect = 6e-41
Identities = 400/585 (68%), Gaps = 27/585 (5%)
Strand=Plus/Minus
Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159
||||||| |||| | || ||||| | |||||| ||||| | ||| | || |||||
Sbjct 1176 TTTGTTGTTCAGGAGGCTG---TAGAGGAGGCAGGCGAAGTCGCAGTGGAGACCCTCGTC 1120
Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219
||| ||||||| ||||||||||| ||| |||||||||| |||| || ||||||||
Sbjct 1119 ACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCCCCGCTTCTTGAGCCA 1060
Query 48220 GAAAATTGCCGCGAAAG-AGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGA 48278
||| || | || |||| |||| ||||||||||| ||||| || || || ||| ||
Sbjct 1059 GAAGATGGA-GCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGA 1001
Query 48279 GCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338
| ||| | |||| ||| | | || |||||| || |||||||| |||||||
Sbjct 1000 TGCGCTCGGC-AAAGGAGC-TCGACGAGTG-GATCCAACGCAGAGCCCAGTCGGCCTTCT 944
Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395
| || ||| || | || || || || ||||||| || ||| ||| | | ||
Sbjct 943 TTCCGACGCAGGGGACGGTTTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGAGT 887
Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455
|| | ||||| ||| || | ||||||||| ||||| | ||||| || ||||
Sbjct 886 CCTTGATGTAGGTCTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCGA 827
Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515
||||||| ||||||||||| | |||||| || ||||| || | ||| | ||
Sbjct 826 TCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGCCG 768
Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574
|| || ||||| ||| || || || || || || |||||||| ||||| || | |
Sbjct 767 GCGAGGTTCTCGAGGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACG 708
Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCCCTGTACG---TCTTTGCCCAG 48627
|| ||||||||| | | |||| || |||||| || ||| || | ||
Sbjct 707 AAGCGGCGCTCGTCGGCGTTGAG-GCGGTTGTTCCAG---TGGACGAGATCAGCGGAGAG 652
Query 48628 GTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672
||| || || ||| | ||||||||||| || | || || |||||
Sbjct 651 GTCGACCTCCTCCGCGGTCCAGAAGGAGGCAACCGCCTTCTTGTA 607
>seq7765
Length=42474
Score = 183 bits (202), Expect = 6e-41
Identities = 400/585 (68%), Gaps = 27/585 (5%)
Strand=Plus/Plus
Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159
||||||| |||| | || ||||| | |||||| ||||| | ||| | || |||||
Sbjct 40007 TTTGTTGTTCAGGAGGCTG---TAGAGGAGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTC 40063
Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219
||| ||||||| ||||||||||| ||| |||||||||| |||| || ||||||||
Sbjct 40064 ACGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCAGGCATGAGGCCCCGCTTCTTGAGCCA 40123
Query 48220 GAAAATTGCCGCGAAA-GAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGA 48278
||| | || || ||| ||||| ||||||||||| ||||| || || || ||| ||
Sbjct 40124 GAAGA-TGGAGCAAAAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGA 40182
Query 48279 GCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338
| ||| | |||| ||| | | || |||||| || |||||||| |||||||
Sbjct 40183 TGCGCTCGGC-AAAGGAGC-TCGACGAGTG-GATCCAACGCAGAGCCCAGTCGGCCTTCT 40239
Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395
| || ||| || | || || || || ||||||| || ||| ||| | | ||
Sbjct 40240 TTCCGACGCAGGGGACGGTTTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGAGT 40296
Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455
|| | ||||| ||| || | ||||||||| ||||| | ||||| || ||||
Sbjct 40297 CCTTGATGTAGGTCTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCGA 40356
Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515
||||||| ||||||||||| | |||||| || ||||| || | ||| | ||
Sbjct 40357 TCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGCCG 40415
Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574
|| || ||||| ||| || || || || || || |||||||| ||||| || | |
Sbjct 40416 GCGAGGTTCTCGAGGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACG 40475
Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCCCTGTACG---TCTTTGCCCAG 48627
|| ||||||||| | | |||| || |||||| || ||| || | ||
Sbjct 40476 AAGCGGCGCTCGTCGGCGTTGAG-GCGGTTGTTCCAG---TGGACGAGATCAGCGGAGAG 40531
Query 48628 GTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672
||| || || ||| | ||||||||||| || | || || |||||
Sbjct 40532 GTCGACCTCCTCCGCGGTCCAGAAGGAGGCAACCGCCTTCTTGTA 40576
>seq2510
Length=43382
Score = 176 bits (194), Expect = 8e-39
Identities = 397/587 (68%), Gaps = 31/587 (5%)
Strand=Plus/Minus
Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159
||||||| |||| | || ||||| | |||||| ||||| | ||| | || |||||
Sbjct 21270 TTTGTTGTTCAGGAGGCTG---TAGAGGAGGCAGGCGAAGTCGCAGTGGAGTCCCTCGTC 21214
Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219
||| ||||||| ||||||||||| || |||||||||| || | || ||||||||
Sbjct 21213 ACGGGAGATGAGCTCGTTGGAGAAGGTTAGCCCAGGCATGAGGCCTCGCTTCTTGAGCCA 21154
Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279
||| || | ||| ||||| ||||||||||| ||||| || || || ||| ||
Sbjct 21153 GAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGAT 21094
Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTC---TGAGATCCAGGAAAGCGCCCAGTCTGCCTT 48336
| ||| | || ||| || | | || |||||| |||||||| || |||||
Sbjct 21093 GCGCTCGGCAAAGGAA-----CTCGACGAGTG-GATCCAACGCAGCGCCCACTCGGCCTT 21040
Query 48337 CTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGC 48393
||| || ||| || | ||||| || || ||||||| || ||| ||| | |
Sbjct 21039 CTTTCCGACGCAGGGGACGGTCTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGA 20983
Query 48394 GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGC 48453
|||| | ||||| ||| || | ||||||||| ||||| | ||||| || ||
Sbjct 20982 GTCCTTGATGTAGGTCTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGC 20923
Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513
||||||||| ||||||||||| | |||||| || ||||| || | ||| | |
Sbjct 20922 GATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGC 20864
Query 48514 CAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAA 48572
| || || ||||| ||| || || || || || || |||||||| ||||| || |
Sbjct 20863 CGGCGAGGTTCTCGAGGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGA 20804
Query 48573 GGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCCCTGTACG---TCTTTGCCC 48625
||| ||||||||| | | |||| || |||||| || ||| || |
Sbjct 20803 CGAAGCGGCGCTCGTCGGCGTTGAG-GCGGTTGTTCCAG---TGGACGAGATCAGCGGAG 20748
Query 48626 AGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672
||||| || || ||| | ||||||||||| || | || || |||||
Sbjct 20747 AGGTCGACCTCCTCCGCGGTCCAGAAGGAGGCAACCGCCTTCTTGTA 20701
Score = 98.7 bits (108), Expect = 2e-15
Identities = 242/359 (67%), Gaps = 11/359 (3%)
Strand=Plus/Minus
Query 48233 AAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAA 48292
|| ||||| ||||||||||| ||||| || || || ||| || | ||| | |||
Sbjct 20391 AAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCTCGGC-AAA 20333
Query 48293 GAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGC 48352
| ||| | | || |||||| || |||||||| |||||||| || ||| ||
Sbjct 20332 GGAGC-TCGACGAGTG-GATCCAACGCAGAGCCCAGTCGGCCTTCTTTCCGACGCAGGGG 20275
Query 48353 ATCGTCTCTATGGCCCGGAAGAG---CTTCTTGCACTCACCTGCGTCCGCAACATAGGTA 48409
| || || || || |||||||| | ||| ||| | | |||| | |||||
Sbjct 20274 ACGGTTTCGATCGCGCGGAAGAGGCGCGACTT---CTCCTCGGAGTCCTTGATGTAGGTC 20218
Query 48410 GTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAG 48469
||| || | ||||||||| ||||| | ||||| || ||||||||||| ||||||
Sbjct 20217 TCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAG 20158
Query 48470 AAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATT 48528
||||| | |||||| || ||||| || | ||| | || || || |||||
Sbjct 20157 AAGGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGC-GGCCGGCGAGGTTCTCGAG 20099
Query 48529 GACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGT 48587
||| || || || || || || |||||||| ||||| || | ||| |||||||||
Sbjct 20098 GACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGCGGCGCTCGT 20040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931063703370240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |