Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3117 84.2 1e-11 >seq3117 Length=39173 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||| ||||| ||||| |||||||| || || | |||||| ||||||||||| ||| Sbjct 14538 TACCTTTCCTTTTGCCTCCTCCTTGATCAACATAACGTGCAGTATCATTGAAAACCCTCA 14597 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 ||| ||||| | ||| | || ||| ||||| | | | || | ||||| | || Sbjct 14598 GCATAGGAACAATGCCATTAGATGTTCCATTTGTACCACGGATGTAACTACCTGTTGCTC 14657 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTG 26243 || | |||| | || || ||||| ||||| | || || ||||| || Sbjct 14658 GGATGTTGTGAACTGAAACTCCAATTCCTCCAGCAGACTTGCTTATTATAGCACACTCCT 14717 Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAA 26299 || ||||| | || || | ||||||||| ||||||| | || | |||||| Sbjct 14718 TAAGAGTATCATAGATGCCCTCAATGCTATCATCTTTCATGCATATCAGGAAACAA 14773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252915760997450