Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4174 140 4e-28
seq4514 138 1e-27
seq70 138 1e-27
seq32078 132 6e-26
seq7765 129 7e-25
seq2510 127 2e-24
seq2656 118 1e-21
>seq4174
Length=33674
Score = 140 bits (154), Expect = 4e-28
Identities = 248/362 (69%), Gaps = 0/362 (0%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
||||| || |||||||| || || || ||| || || ||||| | ||||||||
Sbjct 23305 CCAGGGACTGGAAAGACTCTTCTTGCTAAAGCTATTGCAGGTGAGGCTGGAGTCCCATTT 23246
Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434
|| || | || | ||||| ||||||||||||||||| ||||| | | ||
Sbjct 23245 TTCTCTATTTCGGGATCAGAATTTGTTGAGATGTTTGTTGGTGTCGGTGCTTCACGAGTC 23186
Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATT 175494
|| ||||| || ||| || || ||| ||| |||||||| || |||| || |||
Sbjct 23185 CGTGATCTTTTCAAAAAGGCAAAAGAGAATGCACCTTGTATTGTTTTTGTTGACGAAATT 23126
Query 175495 GATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAA 175554
||||| || || | ||| | | | || | | || |||||| || ||||||||
Sbjct 23125 GATGCTGTTGGGAGACAAAGAGGAACAGGCATTGGGGGAGGAAATGATGAAAGAGAACAG 23066
Query 175555 ACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTT 175614
|| | |||||||| | |||||||||||||| ||||| | | ||||| || | ||
Sbjct 23065 ACTCTAAATCAACTTTTGACCGAGATGGATGGTTTTGAGGGTAATACTGGTATAATTGTA 23006
Query 175615 ATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTT 175674
||||| ||||| ||||| | ||||| | ||| || || ||| | || || ||||||
Sbjct 23005 ATTGCAGCCACCAATCGTGCAGATATATTGGATTCTGCTCTTCTTAGGCCTGGACGTTTT 22946
Query 175675 GA 175676
||
Sbjct 22945 GA 22944
>seq4514
Length=32024
Score = 138 bits (152), Expect = 1e-27
Identities = 223/318 (70%), Gaps = 2/318 (1%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
||||| || || ||||| || || || || || || |||||| | ||| |||||
Sbjct 22124 CCAGGCACTGGGAAGACACTGCTGGCTAAGGCAATTGCTGGTGAAGCTGGTGTTCCATTT 22065
Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433
|| || | |||| | | ||||| ||||||||||||||||| ||||| ||| ||
Sbjct 22064 TTCTCAATT-TCTGGTTCCGAGTTTGTAGAGATGTTTGTTGGTGTTGGTGCTTCAAGAGT 22006
Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493
||| ||||| || | | ||| |||||| |||||| ||||| ||| ||||||||||
Sbjct 22005 TCGTGATCTTTTCAAGAAGGCCAAAGAAAATGCACCATGCATTGTTTTCGTTGATGAGAT 21946
Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACA 175553
|||||| || || | |||| | | | ||| | | |||||| || || |||||
Sbjct 21945 TGATGCTGTTGGAAGGCAAAGAGGAACAGGTATTGGAGGTGGAAATGATGAAAGGGAACA 21886
Query 175554 AACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGT 175613
|||| |||| || || | || ||||||||||||||||| | ||||| || | ||
Sbjct 21885 AACACTTAACCAGCTCTTAACTGAGATGGATGGCTTTGAAGGAAATACTGGTATCATTGT 21826
Query 175614 TATTGCGGCCACTAATCG 175631
||||| || || || ||
Sbjct 21825 CATTGCTGCTACAAACCG 21808
>seq70
Length=129315
Score = 138 bits (152), Expect = 1e-27
Identities = 329/490 (67%), Gaps = 8/490 (2%)
Strand=Plus/Minus
Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGA-TTGTGGATTTTCTCA 175249
|||||||| || |||| | || |||| | |||| | | | |||| || ||||| |
Sbjct 36920 TGATGTTGCTGGTGTTGATGAAGC-AAAGCAGGACTTCATGGAAGTTGTAGAATTTCTGA 36862
Query 175250 AGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGG 175309
|| |||| ||||| | || | ||||| || || ||| | ||||| | |
Sbjct 36861 AGAAACCAGAGAGGTTCACTGCAGTCGGTGCACGAATTCCTAAAGGTGTTCTTCTTGTTG 36802
Query 175310 GTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCC 175369
|| || ||||| || ||||| || || || || ||||| |||||| | ||| |
Sbjct 36801 GTCCTCCGGGTACTGGGAAGACACTGCTGGCTAAGGCAATCGCCGGTGAAGCTGGTGTTC 36742
Query 175370 CATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAA 175428
|||| || || | || | | | ||||| ||||||||||| || || ||||| |
Sbjct 36741 CATTTTTCTCAATT-TCAGGTTCTGAGTTTGTAGAGATGTTTGTCGGCGTTGGTGCTTCA 36683
Query 175429 AGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGAT 175488
|| ||||| || || || | | ||| |||||| |||||| ||||| ||| |||||
Sbjct 36682 AGAGTTCGTGAACTTTTCAAGAAGGCCAAAGAAAATGCACCATGCATTGTTTTCGTTGAT 36623
Query 175489 GAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCCAGCAAATGACGAGA 175546
|| |||||||| || || | |||| | | || || | | | | | |||||| ||||
Sbjct 36622 GAAATTGATGCAGTTGGAAGGCAAAGAGGAGCAGGAATTGGAGG--TGGAAATGATGAGA 36565
Query 175547 GAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCA 175606
|||||||||| |||| || || | || ||||||||||||||||| | |||||
Sbjct 36564 GAGAACAAACGCTTAACCAGCTCTTAACTGAGATGGATGGCTTTGAAGGAAACACTGGTG 36505
Query 175607 TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGG 175666
| | |||||||| || || || || | || || | ||| |||| | || | || |
Sbjct 36504 TCATTGTTATTGCAGCTACAAACCGTGCAGACATTTTAGATTCCGCCTTACTGAGGCCTG 36445
Query 175667 GTCGTTTTGA 175676
| || |||||
Sbjct 36444 GACGATTTGA 36435
>seq32078
Length=1569
Score = 132 bits (146), Expect = 6e-26
Identities = 163/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
|| ||| |||| || || || | | |||||||| | ||||| || ||| | ||
Sbjct 916 GCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGACTGGGCTCTGCGTTGGATCCAC 975
Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115
| ||| ||||||| ||||||||| | | || ||||| || || ||||||||||||
Sbjct 976 TC---GTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTC 1032
Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175
|||||||| || || ||| | || | ||| | ||||||||||| |||||||| || ||
Sbjct 1033 TTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTC 1092
Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|||||| || || || || ||||| || ||||||||||||
Sbjct 1093 ACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 1134
>seq7765
Length=42474
Score = 129 bits (142), Expect = 7e-25
Identities = 162/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
|| ||| |||| || || || | | |||||||| | ||||| || ||| | ||
Sbjct 40267 GCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGACTGGGCTCTGCGTTGGATCCAC 40208
Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115
| ||| ||||||| ||||||||| | | || ||||| || || ||||||||||||
Sbjct 40207 TC---GTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTC 40151
Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175
|||||||| || || ||| | || | ||| | ||||||||||| |||||||| || ||
Sbjct 40150 TTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTC 40091
Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|||||| || || || || ||||| || ||||| ||||||
Sbjct 40090 ACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCAC 40049
>seq2510
Length=43382
Score = 127 bits (140), Expect = 2e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127
||||| ||||||||| | | || ||||| || || |||||||||||||||||||| ||
Sbjct 21079 TCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCC 21138
Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
|||||| | || | ||| | |||||||| || |||||||| || ||| |||||| ||
Sbjct 21139 TTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGGCTAACCTTCTCCAAC 21198
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|| || || ||||| || ||||| ||||||
Sbjct 21199 GAGCTCATCTCCCGTGACGAGGGACTCCAC 21228
>seq2656
Length=42395
Score = 118 bits (130), Expect = 1e-21
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127
|||| |||||||||||| |||| || || || || || || |||||||||||||| ||
Sbjct 41829 TCCTACGCCGAGCGCCTCGTTGCCTTCGCCTGCGTCGAAGGCATCTTCTTCTCCGGCTCC 41770
Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
|||||||| || | ||| | |||||||| || |||||||| ||||| ||||| ||
Sbjct 41769 TTCTGCGCAATCTTCTGGCTCAAGAAGCGCGGACTCATGCCTGGCCTCACGTTCTCCAAC 41710
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|| || || || || || ||||| ||||||
Sbjct 41709 GAGCTCATCTCTCGCGACGAGGGCCTCCAC 41680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596269182463680
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