Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq490 87.8 3e-12 >seq490 Length=81643 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| |||| || |||||||| || |||||||| | || || ||| || Sbjct 59058 ATGCAGATATTTGTTAAGACCTTGACTGGTAAGACTATTACCCTTGAGGTTGAATCGTCA 59117 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || || || || || ||||| || || || || Sbjct 59118 GACACCATTGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 59177 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 |||||| | || | ||| || ||||||||||||||| Sbjct 59178 CAAAGACTCATATTTGCAGGGAAGCAGCTCGAAGAT 59213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731503447557600