Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq490 87.8 4e-12
>seq490
Length=81643
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || ||||||| | || ||| |||| || | || || || ||||| || | |||
Sbjct 59240 GATGTTGTAATCAGCAAGGGTGCGTCCATCTTCGAGCTGCTTCCCTGCAAATATGAGTCT 59181
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| || || || || || || || || || || || || || || || || |
Sbjct 59180 TTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGACGTTGTCAATGGT 59121
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||||||||||| || || || ||||| || |||||||| || || |||| |||||||||
Sbjct 59120 GTCTGACGATTCAACCTCAAGGGTAATAGTCTTACCAGTCAAGGTCTTAACAAATATCTG 59061
Query 192534 CAT 192536
|||
Sbjct 59060 CAT 59058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983971846496100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |