Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4514 152 2e-31 seq70 143 8e-29 seq4972 118 3e-21 seq4174 107 6e-18 seq422 100 8e-16 seq6053 93.3 1e-13 seq4518 89.7 2e-12 seq229 86.0 2e-11 seq473 84.2 6e-11 >seq4514 Length=32024 Score = 152 bits (168), Expect = 2e-31 Identities = 337/487 (69%), Gaps = 20/487 (4%) Strand=Plus/Plus Query 288873 TAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAG-ATTCGG 288931 ||| || | |||||| || || || | |||||| || || | |||| ||| | | Sbjct 21783 TAAGGCAGAGTCTAAGATGTCTGCACGGTTTGTAGCAGCAATGACAATGATACCAGTA-- 21840 Query 288932 TTTGCTT-AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990 ||| ||| ||| |||||||| ||||| | || |||||||||||||||||||||||| Sbjct 21841 TTTCCTTCAAAGCCATCCATCTCAGTTAAGAGCTGGTTAAGTGTTTGTTCCCTTTCATCA 21900 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 ||| ||||| ||| ||| | | || |||| | |||||||||||||| || ||| Sbjct 21901 TTTCCACCTC--CAAT-ACCTG--TTCCT-CTTTGCCTTCCAACAGCATCAATCTCATCA 21954 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGG 289108 | ||||| | || || | ||||| | | || ||| ||| | || | || | | Sbjct 21955 ACGAAAACAATGCATGGTGCATTTTCTTTGGCCTTCTTGAAAAGA--TCACGAACTCTTG 22012 Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167 | || |||| ||||||| |||| |||||||| || ||| | || | |||| | |||| Sbjct 22013 AAGCACCAACACCAACAAACATCTCTACAAACTCGGAACCAGA-AATTGAGAAAAATGGA 22071 Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227 ||| ||||| || || | |||| | ||||| |||||||| || || || || || || Sbjct 22072 ACACCAGCTTCACCAGCAATTGCCTTAGCCAGCAGTGTCTTCCCAGTGCCTGGGGGACCG 22131 Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287 | | |||||| || || || | | ||| || ||| | | |||| || ||||| Sbjct 22132 ACAAGTAGAACACCTTTAGGAATTCGTGCACCGACAGCGGTGAACCTCTCTGGTTTCTTT 22191 Query 289288 AAAAATTCTACAATTTCC-TCAAGTTCATATTTTGCCTCATC-ACATCCTGCTACATCAG 289345 | |||||| || | |||| | ||| || | || || ||||| ||| || || |||||| Sbjct 22192 AGAAATTCCACCACTTCCATGAAG-TCCTGCTTAGCTTCATCTACA-CCAGCAACATCAT 22249 Query 289346 CAAAAGT 289352 ||| || Sbjct 22250 TAAATGT 22256 >seq70 Length=129315 Score = 143 bits (158), Expect = 8e-29 Identities = 326/477 (68%), Gaps = 20/477 (4%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT-AGATTCG-GTTTGCTT-A 288939 ||||| || || || | |||||| ||||| |||| ||||| | | | |||| ||| | Sbjct 36465 TCTAAAATGTCTGCACGGTTTGTAGCTGC-AATA--ACAATGACACCAGTGTTTCCTTCA 36521 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| ||||| | || ||||| |||||||| || ||||||||| |||| Sbjct 36522 AAGCCATCCATCTCAGTTAAGAGCTGGTTAAGCGTTTGTTCTCTCTCATCATTTCCACCT 36581 Query 289000 CTTGAATCACCCGAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAAA 289057 | ||| | |||||| ||| | ||||| ||||||||||| |||| ||||| Sbjct 36582 CC--AATTCCT------GCTCCTCTTTGCCTTCCAACTGCATCAATTTCATCAACGAAAA 36633 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | || || | ||||| | | || | || | ||| | || | || || |||| Sbjct 36634 CAATGCATGGTGCATTTTCTTTGGCCTTCTTGAAAAGTTCACGAACTCTTGAAGCACCAA 36693 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCT 289176 || ||| |||| |||||||| |||||| | || | |||| | |||| ||| ||| Sbjct 36694 CGCCGACAAACATCTCTACAAACTCAGAACCTGA-AATTGAGAAAAATGGAACACCAGCT 36752 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || || || | |||| | ||||| |||||||| || || || || || || | | ||| Sbjct 36753 TCACCGGCGATTGCCTTAGCCAGCAGTGTCTTCCCAGTACCCGGAGGACCAACAAGAAGA 36812 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCT 289296 || || || || | | ||| || | | | | |||| || |||| | ||||||| Sbjct 36813 ACACCTTTAGGAATTCGTGCACCGACTGCAGTGAACCTCTCTGGTTTCTTCAGAAATTCT 36872 Query 289297 ACAATTTCC-TCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 |||| |||| | ||| || | ||||| |||||| || || |||||| |||| || Sbjct 36873 ACAACTTCCATGAAG-TCCTGCTTTGCTTCATCAACACCAGCAACATCATCAAATGT 36928 >seq4972 Length=30169 Score = 118 bits (130), Expect = 3e-21 Identities = 229/338 (68%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||||||||| ||||||| || ||| ||||| |||||| ||| | | |||||| Sbjct 4899 TTTCTTACGGTGTTATCATATTTAACCATTATGTCCTCCATAGCCTTTACAAGCCGACGC 4840 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || ||||| ||||| || ||||| || || |||||||| ||||| | | ||||||| Sbjct 4839 TGGATATATCCAGTCTCGGAAGTTTTAACTGCAGTATCAATGAGACCTTCCCTACCACCC 4780 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || ||||| ||||| | || | || || || | || | | || |||| || ||| Sbjct 4779 ATCGCATGAAAGAAAAATTCCTGAGGGGTCAGGCCACGAAGATAAGAATTCTCCACAAAA 4720 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| || || || || || || ||||| || | || | | | | Sbjct 4719 CCACGACTTTCAGGTCCATAATCATCTTTTGTGAAGTGAGGTAATGTTCGATCATTGAAA 4660 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 ||| | || ||||| || || ||||| |||||||| |||| || | ||||||| || Sbjct 4659 CCGAAAGGAATACGTTTGCCTTCAACATTCTGCTGCCCCACACAAGCTGTCATCTGAGAT 4600 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 ||||| | ||| || || || || ||| | ||||| Sbjct 4599 ATATTGATGAAACTACCTTTCGAACCTGCAGTAACCAT 4562 >seq4174 Length=33674 Score = 107 bits (118), Expect = 6e-18 Identities = 319/483 (66%), Gaps = 32/483 (7%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTG---CTTA 288939 || |||||||| || | || || ||||| | ||||| ||| | || | || | Sbjct 22974 TCCAATATATCTGCACGATTGGTGGCTGCAATTACAATTATAC---CAGTATTACCCTCA 23030 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || |||| |||||| || || ||||| |||||||||||| ||| Sbjct 23031 AAACCATCCATCTCGGTCAAAAGTTGATTTAGAGTCTGTTCTCTTTCATCATTT---CCT 23087 Query 289000 CTTGAATCACCCGAATCGCT-----CCtttttttACCAACAGCATCAATTTCGTCAATGA 289054 | ||| ||| || |||| | | |||||||||||||||||||||| | Sbjct 23088 C--------CCCCAATGCCTGTTCCTCTTTGTCTCCCAACAGCATCAATTTCGTCAACAA 23139 Query 289055 AAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTC 289114 ||| | ||| || | ||| | | | || || || | || | || || || || | Sbjct 23140 AAACAATACAAGGTGCATTCTCTTTTGCCTTTTTGAAAAGATCACGGACTCGTGAAGCAC 23199 Query 289115 CAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTT 289173 | | ||||||| |||| || |||||||| || | || | | || | |||| || Sbjct 23200 CGACACCAACAAACATCTCAACAAATTCTGATCCCGA-AATAGAGAAAAATGGGACTCCA 23258 Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAAT 289233 || || ||||| | || | || ||||| ||||| || || || || || || | | Sbjct 23259 GCCTCACCTGCAATAGCTTTAGCAAGAAGAGTCTTTCCAGTCCCTGGAGGACCAACAAGG 23318 Query 289234 AGAACTCCCTTTGGTACTTTTGC-CCCA--GCAGACTTATATTTCTCAGGGCTCTTTAAA 289290 ||||| || || || | | || |||| |||| || | | || || |||| ||| Sbjct 23319 AGAACACCTTTAGGAATTCGAGCACCCACTGCAG---TAAACCTTTCTGGTTTCTTCAAA 23375 Query 289291 AATTCTACAATTTCC-TCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAA 289349 || || || | |||| | ||| || | ||||| |||||| ||| || |||||| |||| Sbjct 23376 AACTCCACTACTTCCATGAAG-TCTTGCTTTGCTTCATCAACTCCAGCAACATCATCAAA 23434 Query 289350 AGT 289352 || Sbjct 23435 TGT 23437 >seq422 Length=84726 Score = 100 bits (110), Expect = 8e-16 Identities = 314/471 (67%), Gaps = 23/471 (5%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939 || |||||||| | ||||||||| | || | |||||| | ||| |||| | Sbjct 46150 TCCAATATATCAGGTCTGTTTGTACCAGCAAGTACAACCACCCCAGAGGTGGTTCC---A 46206 Query 288940 AATCCATCCATACTTGTTAAA-ATTTGATT--AAGTGTTTGTTCCCTTTCATCATTTGAA 288996 ||||||||||| || || | ||||| ||||| || |||| |||||||| ||| Sbjct 46207 AATCCATCCAT-CTCCACAAGCAACTGATTTAAAGTGCTT--TCCCGCTCATCATTGGAA 46263 Query 288997 CCTCTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055 ||| || |||| || || || ||||| |||||||| || |||||||| Sbjct 46264 CCTGAGAAACCACCGCG----GCCTCTAGCCCGACCAATTGCATCAATCTCATCAATGAA 46319 Query 289056 AATCACACACGGAGAATTTTGTCTCGCAA-TTGCAAATAATTCTCTTACACGGGATGCTC 289114 || | || |||||| ||| || || ||| || ||||| | || | |||| || Sbjct 46320 TATTATACTAGGAGAACATTGCCTAGCTTCTTGAAACAAATTC-CGCACTCTTGATGGTC 46378 Query 289115 CAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTT 289173 | | ||||||| ||||||| | ||| || ||| | |||| |||| | || | ||| Sbjct 46379 CGACACCAACAAACATTTCCATAAAATCTGAACCAGATA-TTGACAAAAAGGGCACACCA 46437 Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAAT 289233 | ||| ||||| ||| |||| ||||||||||| ||||| ||||| || || | | Sbjct 46438 GATTCTCCTGCAGTTGCTTTCGCAAGAAGTGTCTTCCCTGTACCAGGAGGGCCGACAAGA 46497 Query 289234 AGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAA 289292 ||| | ||||||| | ||||| | | | ||| |||||| | ||| | || | || Sbjct 46498 AGAGC-ACCTTTGGGAATTTTGGCTCCCAACTCTTCATATTTTTTAGGATTTTTCAGGAA 46556 Query 289293 TTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | |||| ||| | ||| | ||||| ||||| || || || || || Sbjct 46557 GTGCACAAACTCCATTATTTCTTGCTTTGCTTCATCGCAGCCAGCAACGTC 46607 >seq6053 Length=26609 Score = 93.3 bits (102), Expect = 1e-13 Identities = 309/468 (66%), Gaps = 17/468 (4%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939 || |||||||| | || |||||| | || | |||||| | ||| |||| | Sbjct 7249 TCCAATATATCAGGTCGGTTTGTACCAGCAAGTACAACTACCCCAGAGGTGGTTCC---A 7305 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 ||||||||||| | | | ||||| | ||| ||||| ||||||||||||||| Sbjct 7306 AATCCATCCATCTCTACGAGCAACTGATTTAATGTACTTTCCCGCTCATCATTTGAACCT 7365 Query 289000 CTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 || |||| || || || || | |||||| |||||||| || |||||||| || Sbjct 7366 GAGAAACCACCACG--TC-CT-CTAGCTCTACCAATTGCATCAATCTCATCAATGAATAT 7421 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 | || |||| | ||||| || | ||| || | | || | || || ||||| Sbjct 7422 TATACTAGGAGCACACTGTCTAGCTTCTTGAAACAAGTTCCGCACTCTGGCTGGTCCAAC 7481 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177 ||||||| ||||||| | ||| |||||| | |||| | || | || | ||| | || Sbjct 7482 ACCAACAAACATTTCCATAAAATCAGAACCAGATA-TCGACAAAAAGGGCACACCAGATT 7540 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | ||||| ||| | || |||||||| || ||||| ||||| || || | | || Sbjct 7541 CTCCTGCAGTTGCTTTGGCTAGAAGTGTTTTTCCTGTACCAGGAGGGCCAACAAGAAGGG 7600 Query 289238 CTCCCTTTGGTACTTTTGC-CCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTC 289295 | || || || | ||| || |||| | ||| ||| || | ||| | || || || | Sbjct 7601 CACCTTTGGGGATTTTGGCTCCCA--ACTCTTCATACTTTTTAGGATTTTTCAAGAAGTG 7658 Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| | ||| | ||| || || || || || || ||||| Sbjct 7659 CACAAACTCCATTATTTCTTGTTTGGCTTCGTCGCAGCCAGCAACATC 7706 >seq4518 Length=32015 Score = 89.7 bits (98), Expect = 2e-12 Identities = 307/468 (66%), Gaps = 17/468 (4%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939 ||||||||||| | |||||| || | || | ||| || | |||| ||| | | Sbjct 19031 TCTAATATATCAGGTCTGTTAGTACCGGCGAGTACTACTACTCCAGATGTGGT---CCCA 19087 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| | | | ||||| || || ||| | ||||||||||| |||| Sbjct 19088 AAACCATCCATCTCTACAAGCAACTGATTTAGAGTGCTTTCACGTTCATCATTTGCACCT 19147 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 || | || | || ||| | ||||| ||||||||||| ||||| || || Sbjct 19148 GAGAAACCTCC---ACGGCCTCTTGCTCGACCAATCGCATCAATTTCATCAATAAATATT 19204 Query 289060 ACACACGGAGAATTTTGTCTCGC-AATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 | || || | | || || || ||| || ||||| | ||| | | || ||||| Sbjct 19205 ATACTGGGTGCACACTGCCTAGCTTCTTGAAACAAATTC-CGTACTCTTGCTGGTCCAAC 19263 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177 ||||||| ||||||| | ||| || ||| |||||| |||| | || | |||| | | Sbjct 19264 ACCAACAAACATTTCCAGAAAATCCGAACCGGATA-TTGACAAAAAGGGCACATCAGACT 19322 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | ||||| ||| | | ||||| ||||| || || ||||| ||||| | | || Sbjct 19323 CACCTGCAGTTGCTTTAGAAAGAAGAGTCTTTCCCGTACCAGGAGGTCCAACAAGAAGGG 19382 Query 289238 CTCCCTTTGGTACTTTTGC-CCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTC 289295 | || || || | ||| || || || ||| ||| || | ||| | ||||| || | Sbjct 19383 CACCTTTAGGAATTTTAGCTCCTAG--TTCTTCATACTTTTTAGGATTTTTTAAGAAGTG 19440 Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| | ||| | ||| || |||||||| || || ||||| Sbjct 19441 CACAAACTCCATTATTTCTTGTTTGGCTTCATCACAACCAGCAACATC 19488 >seq229 Length=142176 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| || | ||| |||||||| || ||||||||| | |||| ||| Sbjct 15712 GCAATTAGACCACATTTCTCACATACATGGACCCTATAAGCATCACTTTGGTCAAATAAT 15653 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 | |||| ||| | | || ||||||| |||||||||||| || ||||| || || Sbjct 15652 CTTTCCTTCAAGAAATGTGCAGCCCCGTGTGCAATCATACAATCTCGTTCCATCTCCCCA 15593 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573 || || | ||| ||||| |||| | || || || || || | ||||| Sbjct 15592 AATCGCAAACCTCCATCACGAGAACGTCCTTCTGCCGGTTGCCTGGTGAG 15543 >seq473 Length=87853 Score = 84.2 bits (92), Expect = 6e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 408951 TAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCGAGTCCCACA 409010 || ||||||||||||||| || |||||||||||||||| |||| ||||||||| ||| | Sbjct 707 TAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGCGGGTTCGAGCCCCGCC 648 Query 409011 TAGAACAttttttt 409024 || ||||||||| Sbjct 647 GGGACCATTTTTTT 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471057900188382