Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4514 152 2e-31
seq70 143 8e-29
seq4972 118 3e-21
seq4174 107 6e-18
seq422 100 8e-16
seq6053 93.3 1e-13
seq4518 89.7 2e-12
seq229 86.0 2e-11
seq473 84.2 6e-11
>seq4514
Length=32024
Score = 152 bits (168), Expect = 2e-31
Identities = 337/487 (69%), Gaps = 20/487 (4%)
Strand=Plus/Plus
Query 288873 TAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAG-ATTCGG 288931
||| || | |||||| || || || | |||||| || || | |||| ||| | |
Sbjct 21783 TAAGGCAGAGTCTAAGATGTCTGCACGGTTTGTAGCAGCAATGACAATGATACCAGTA-- 21840
Query 288932 TTTGCTT-AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990
||| ||| ||| |||||||| ||||| | || ||||||||||||||||||||||||
Sbjct 21841 TTTCCTTCAAAGCCATCCATCTCAGTTAAGAGCTGGTTAAGTGTTTGTTCCCTTTCATCA 21900
Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050
||| ||||| ||| ||| | | || |||| | |||||||||||||| || |||
Sbjct 21901 TTTCCACCTC--CAAT-ACCTG--TTCCT-CTTTGCCTTCCAACAGCATCAATCTCATCA 21954
Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGG 289108
| ||||| | || || | ||||| | | || ||| ||| | || | || | |
Sbjct 21955 ACGAAAACAATGCATGGTGCATTTTCTTTGGCCTTCTTGAAAAGA--TCACGAACTCTTG 22012
Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167
| || |||| ||||||| |||| |||||||| || ||| | || | |||| | ||||
Sbjct 22013 AAGCACCAACACCAACAAACATCTCTACAAACTCGGAACCAGA-AATTGAGAAAAATGGA 22071
Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227
||| ||||| || || | |||| | ||||| |||||||| || || || || || ||
Sbjct 22072 ACACCAGCTTCACCAGCAATTGCCTTAGCCAGCAGTGTCTTCCCAGTGCCTGGGGGACCG 22131
Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287
| | |||||| || || || | | ||| || ||| | | |||| || |||||
Sbjct 22132 ACAAGTAGAACACCTTTAGGAATTCGTGCACCGACAGCGGTGAACCTCTCTGGTTTCTTT 22191
Query 289288 AAAAATTCTACAATTTCC-TCAAGTTCATATTTTGCCTCATC-ACATCCTGCTACATCAG 289345
| |||||| || | |||| | ||| || | || || ||||| ||| || || ||||||
Sbjct 22192 AGAAATTCCACCACTTCCATGAAG-TCCTGCTTAGCTTCATCTACA-CCAGCAACATCAT 22249
Query 289346 CAAAAGT 289352
||| ||
Sbjct 22250 TAAATGT 22256
>seq70
Length=129315
Score = 143 bits (158), Expect = 8e-29
Identities = 326/477 (68%), Gaps = 20/477 (4%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT-AGATTCG-GTTTGCTT-A 288939
||||| || || || | |||||| ||||| |||| ||||| | | | |||| ||| |
Sbjct 36465 TCTAAAATGTCTGCACGGTTTGTAGCTGC-AATA--ACAATGACACCAGTGTTTCCTTCA 36521
Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
|| |||||||| ||||| | || ||||| |||||||| || ||||||||| ||||
Sbjct 36522 AAGCCATCCATCTCAGTTAAGAGCTGGTTAAGCGTTTGTTCTCTCTCATCATTTCCACCT 36581
Query 289000 CTTGAATCACCCGAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAAA 289057
| ||| | |||||| ||| | ||||| ||||||||||| |||| |||||
Sbjct 36582 CC--AATTCCT------GCTCCTCTTTGCCTTCCAACTGCATCAATTTCATCAACGAAAA 36633
Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117
| || || | ||||| | | || | || | ||| | || | || || ||||
Sbjct 36634 CAATGCATGGTGCATTTTCTTTGGCCTTCTTGAAAAGTTCACGAACTCTTGAAGCACCAA 36693
Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCT 289176
|| ||| |||| |||||||| |||||| | || | |||| | |||| ||| |||
Sbjct 36694 CGCCGACAAACATCTCTACAAACTCAGAACCTGA-AATTGAGAAAAATGGAACACCAGCT 36752
Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236
|| || || | |||| | ||||| |||||||| || || || || || || | | |||
Sbjct 36753 TCACCGGCGATTGCCTTAGCCAGCAGTGTCTTCCCAGTACCCGGAGGACCAACAAGAAGA 36812
Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCT 289296
|| || || || | | ||| || | | | | |||| || |||| | |||||||
Sbjct 36813 ACACCTTTAGGAATTCGTGCACCGACTGCAGTGAACCTCTCTGGTTTCTTCAGAAATTCT 36872
Query 289297 ACAATTTCC-TCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352
|||| |||| | ||| || | ||||| |||||| || || |||||| |||| ||
Sbjct 36873 ACAACTTCCATGAAG-TCCTGCTTTGCTTCATCAACACCAGCAACATCATCAAATGT 36928
>seq4972
Length=30169
Score = 118 bits (130), Expect = 3e-21
Identities = 229/338 (68%), Gaps = 0/338 (0%)
Strand=Plus/Minus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
||||||||||| ||||||| || ||| ||||| |||||| ||| | | ||||||
Sbjct 4899 TTTCTTACGGTGTTATCATATTTAACCATTATGTCCTCCATAGCCTTTACAAGCCGACGC 4840
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|| ||||| ||||| || ||||| || || |||||||| ||||| | | |||||||
Sbjct 4839 TGGATATATCCAGTCTCGGAAGTTTTAACTGCAGTATCAATGAGACCTTCCCTACCACCC 4780
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|| ||||| ||||| | || | || || || | || | | || |||| || |||
Sbjct 4779 ATCGCATGAAAGAAAAATTCCTGAGGGGTCAGGCCACGAAGATAAGAATTCTCCACAAAA 4720
Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778
||||| || || || || || || ||||| || | || | | | |
Sbjct 4719 CCACGACTTTCAGGTCCATAATCATCTTTTGTGAAGTGAGGTAATGTTCGATCATTGAAA 4660
Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838
||| | || ||||| || || ||||| |||||||| |||| || | ||||||| ||
Sbjct 4659 CCGAAAGGAATACGTTTGCCTTCAACATTCTGCTGCCCCACACAAGCTGTCATCTGAGAT 4600
Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876
||||| | ||| || || || || ||| | |||||
Sbjct 4599 ATATTGATGAAACTACCTTTCGAACCTGCAGTAACCAT 4562
>seq4174
Length=33674
Score = 107 bits (118), Expect = 6e-18
Identities = 319/483 (66%), Gaps = 32/483 (7%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTG---CTTA 288939
|| |||||||| || | || || ||||| | ||||| ||| | || | || |
Sbjct 22974 TCCAATATATCTGCACGATTGGTGGCTGCAATTACAATTATAC---CAGTATTACCCTCA 23030
Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
|| |||||||| || |||| |||||| || || ||||| |||||||||||| |||
Sbjct 23031 AAACCATCCATCTCGGTCAAAAGTTGATTTAGAGTCTGTTCTCTTTCATCATTT---CCT 23087
Query 289000 CTTGAATCACCCGAATCGCT-----CCtttttttACCAACAGCATCAATTTCGTCAATGA 289054
| ||| ||| || |||| | | |||||||||||||||||||||| |
Sbjct 23088 C--------CCCCAATGCCTGTTCCTCTTTGTCTCCCAACAGCATCAATTTCGTCAACAA 23139
Query 289055 AAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTC 289114
||| | ||| || | ||| | | | || || || | || | || || || || |
Sbjct 23140 AAACAATACAAGGTGCATTCTCTTTTGCCTTTTTGAAAAGATCACGGACTCGTGAAGCAC 23199
Query 289115 CAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTT 289173
| | ||||||| |||| || |||||||| || | || | | || | |||| ||
Sbjct 23200 CGACACCAACAAACATCTCAACAAATTCTGATCCCGA-AATAGAGAAAAATGGGACTCCA 23258
Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAAT 289233
|| || ||||| | || | || ||||| ||||| || || || || || || | |
Sbjct 23259 GCCTCACCTGCAATAGCTTTAGCAAGAAGAGTCTTTCCAGTCCCTGGAGGACCAACAAGG 23318
Query 289234 AGAACTCCCTTTGGTACTTTTGC-CCCA--GCAGACTTATATTTCTCAGGGCTCTTTAAA 289290
||||| || || || | | || |||| |||| || | | || || |||| |||
Sbjct 23319 AGAACACCTTTAGGAATTCGAGCACCCACTGCAG---TAAACCTTTCTGGTTTCTTCAAA 23375
Query 289291 AATTCTACAATTTCC-TCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAA 289349
|| || || | |||| | ||| || | ||||| |||||| ||| || |||||| ||||
Sbjct 23376 AACTCCACTACTTCCATGAAG-TCTTGCTTTGCTTCATCAACTCCAGCAACATCATCAAA 23434
Query 289350 AGT 289352
||
Sbjct 23435 TGT 23437
>seq422
Length=84726
Score = 100 bits (110), Expect = 8e-16
Identities = 314/471 (67%), Gaps = 23/471 (5%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939
|| |||||||| | ||||||||| | || | |||||| | ||| |||| |
Sbjct 46150 TCCAATATATCAGGTCTGTTTGTACCAGCAAGTACAACCACCCCAGAGGTGGTTCC---A 46206
Query 288940 AATCCATCCATACTTGTTAAA-ATTTGATT--AAGTGTTTGTTCCCTTTCATCATTTGAA 288996
||||||||||| || || | ||||| ||||| || |||| |||||||| |||
Sbjct 46207 AATCCATCCAT-CTCCACAAGCAACTGATTTAAAGTGCTT--TCCCGCTCATCATTGGAA 46263
Query 288997 CCTCTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055
||| || |||| || || || ||||| |||||||| || ||||||||
Sbjct 46264 CCTGAGAAACCACCGCG----GCCTCTAGCCCGACCAATTGCATCAATCTCATCAATGAA 46319
Query 289056 AATCACACACGGAGAATTTTGTCTCGCAA-TTGCAAATAATTCTCTTACACGGGATGCTC 289114
|| | || |||||| ||| || || ||| || ||||| | || | |||| ||
Sbjct 46320 TATTATACTAGGAGAACATTGCCTAGCTTCTTGAAACAAATTC-CGCACTCTTGATGGTC 46378
Query 289115 CAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTT 289173
| | ||||||| ||||||| | ||| || ||| | |||| |||| | || | |||
Sbjct 46379 CGACACCAACAAACATTTCCATAAAATCTGAACCAGATA-TTGACAAAAAGGGCACACCA 46437
Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAAT 289233
| ||| ||||| ||| |||| ||||||||||| ||||| ||||| || || | |
Sbjct 46438 GATTCTCCTGCAGTTGCTTTCGCAAGAAGTGTCTTCCCTGTACCAGGAGGGCCGACAAGA 46497
Query 289234 AGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAA 289292
||| | ||||||| | ||||| | | | ||| |||||| | ||| | || | ||
Sbjct 46498 AGAGC-ACCTTTGGGAATTTTGGCTCCCAACTCTTCATATTTTTTAGGATTTTTCAGGAA 46556
Query 289293 TTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
| |||| ||| | ||| | ||||| ||||| || || || || ||
Sbjct 46557 GTGCACAAACTCCATTATTTCTTGCTTTGCTTCATCGCAGCCAGCAACGTC 46607
>seq6053
Length=26609
Score = 93.3 bits (102), Expect = 1e-13
Identities = 309/468 (66%), Gaps = 17/468 (4%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939
|| |||||||| | || |||||| | || | |||||| | ||| |||| |
Sbjct 7249 TCCAATATATCAGGTCGGTTTGTACCAGCAAGTACAACTACCCCAGAGGTGGTTCC---A 7305
Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
||||||||||| | | | ||||| | ||| ||||| |||||||||||||||
Sbjct 7306 AATCCATCCATCTCTACGAGCAACTGATTTAATGTACTTTCCCGCTCATCATTTGAACCT 7365
Query 289000 CTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058
|| |||| || || || || | |||||| |||||||| || |||||||| ||
Sbjct 7366 GAGAAACCACCACG--TC-CT-CTAGCTCTACCAATTGCATCAATCTCATCAATGAATAT 7421
Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118
| || |||| | ||||| || | ||| || | | || | || || |||||
Sbjct 7422 TATACTAGGAGCACACTGTCTAGCTTCTTGAAACAAGTTCCGCACTCTGGCTGGTCCAAC 7481
Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177
||||||| ||||||| | ||| |||||| | |||| | || | || | ||| | ||
Sbjct 7482 ACCAACAAACATTTCCATAAAATCAGAACCAGATA-TCGACAAAAAGGGCACACCAGATT 7540
Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237
| ||||| ||| | || |||||||| || ||||| ||||| || || | | ||
Sbjct 7541 CTCCTGCAGTTGCTTTGGCTAGAAGTGTTTTTCCTGTACCAGGAGGGCCAACAAGAAGGG 7600
Query 289238 CTCCCTTTGGTACTTTTGC-CCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTC 289295
| || || || | ||| || |||| | ||| ||| || | ||| | || || || |
Sbjct 7601 CACCTTTGGGGATTTTGGCTCCCA--ACTCTTCATACTTTTTAGGATTTTTCAAGAAGTG 7658
Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|||| ||| | ||| | ||| || || || || || || |||||
Sbjct 7659 CACAAACTCCATTATTTCTTGTTTGGCTTCGTCGCAGCCAGCAACATC 7706
>seq4518
Length=32015
Score = 89.7 bits (98), Expect = 2e-12
Identities = 307/468 (66%), Gaps = 17/468 (4%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939
||||||||||| | |||||| || | || | ||| || | |||| ||| | |
Sbjct 19031 TCTAATATATCAGGTCTGTTAGTACCGGCGAGTACTACTACTCCAGATGTGGT---CCCA 19087
Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
|| |||||||| | | | ||||| || || ||| | ||||||||||| ||||
Sbjct 19088 AAACCATCCATCTCTACAAGCAACTGATTTAGAGTGCTTTCACGTTCATCATTTGCACCT 19147
Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059
|| | || | || ||| | ||||| ||||||||||| ||||| || ||
Sbjct 19148 GAGAAACCTCC---ACGGCCTCTTGCTCGACCAATCGCATCAATTTCATCAATAAATATT 19204
Query 289060 ACACACGGAGAATTTTGTCTCGC-AATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118
| || || | | || || || ||| || ||||| | ||| | | || |||||
Sbjct 19205 ATACTGGGTGCACACTGCCTAGCTTCTTGAAACAAATTC-CGTACTCTTGCTGGTCCAAC 19263
Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177
||||||| ||||||| | ||| || ||| |||||| |||| | || | |||| | |
Sbjct 19264 ACCAACAAACATTTCCAGAAAATCCGAACCGGATA-TTGACAAAAAGGGCACATCAGACT 19322
Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237
| ||||| ||| | | ||||| ||||| || || ||||| ||||| | | ||
Sbjct 19323 CACCTGCAGTTGCTTTAGAAAGAAGAGTCTTTCCCGTACCAGGAGGTCCAACAAGAAGGG 19382
Query 289238 CTCCCTTTGGTACTTTTGC-CCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTC 289295
| || || || | ||| || || || ||| ||| || | ||| | ||||| || |
Sbjct 19383 CACCTTTAGGAATTTTAGCTCCTAG--TTCTTCATACTTTTTAGGATTTTTTAAGAAGTG 19440
Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|||| ||| | ||| | ||| || |||||||| || || |||||
Sbjct 19441 CACAAACTCCATTATTTCTTGTTTGGCTTCATCACAACCAGCAACATC 19488
>seq229
Length=142176
Score = 86.0 bits (94), Expect = 2e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463
|| || |||||||| || | ||| |||||||| || ||||||||| | |||| |||
Sbjct 15712 GCAATTAGACCACATTTCTCACATACATGGACCCTATAAGCATCACTTTGGTCAAATAAT 15653
Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523
| |||| ||| | | || ||||||| |||||||||||| || ||||| || ||
Sbjct 15652 CTTTCCTTCAAGAAATGTGCAGCCCCGTGTGCAATCATACAATCTCGTTCCATCTCCCCA 15593
Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573
|| || | ||| ||||| |||| | || || || || || | |||||
Sbjct 15592 AATCGCAAACCTCCATCACGAGAACGTCCTTCTGCCGGTTGCCTGGTGAG 15543
>seq473
Length=87853
Score = 84.2 bits (92), Expect = 6e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 408951 TAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCGAGTCCCACA 409010
|| ||||||||||||||| || |||||||||||||||| |||| ||||||||| ||| |
Sbjct 707 TAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGCGGGTTCGAGCCCCGCC 648
Query 409011 TAGAACAttttttt 409024
|| |||||||||
Sbjct 647 GGGACCATTTTTTT 634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471057900188382
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |