Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq220 102 7e-17
seq5203 89.7 4e-13
seq2385 89.7 4e-13
>seq220
Length=196394
Score = 102 bits (112), Expect = 7e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || |||||||| || | || ||||| || || ||| |||| ||| || |
Sbjct 149226 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTTGAGAGCTCA 149167
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | | ||||| ||||||| ||||| |||||| | ||| ||||||
Sbjct 149166 -GACACCATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCA 149108
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || || || | || ||||| ||||| ||||||| | || | || || |||||
Sbjct 149107 GCAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGGCGCACTCTTGCTGACTACAA 149048
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||| || |||||||| | ||| ||||| | || || | || ||||
Sbjct 149047 CATTCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTTAGGGGTGGAA 148998
>seq5203
Length=29324
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425
||||| |||||| | ||| ||| || || || | |||| ||| ||||||||||||||
Sbjct 19253 GACAAGGAAGGCATACCCCCGGACCAGCAGAGGTTGATTTTTGCAGGTAAACAGCTGGAA 19194
Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485
|||| | | ||| |||| || |||||||| || || ||||| ||| | ||| |||| |
Sbjct 19193 GATGGCCGGACACTGGCAGACTACAACATCCAGAAGGAATCGACGCTCCACCTGGTCCTC 19134
Query 110486 AGACTGCGAGGGGG 110499
|| || || || ||
Sbjct 19133 AGGCTCCGCGGCGG 19120
>seq2385
Length=44452
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||| || || | || |||||||| || ||| | || ||| |
Sbjct 34650 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34709
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| ||||| || ||| | ||| ||| ||
Sbjct 34710 GACACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 34769
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| || |||| ||| || || ||||| ||||||| | || |||| |||||||||
Sbjct 34770 CAAAGGCTCATTTTTGCAGGGAAGCAGCTTGAGGATGGACGCACTTTGGCTGATTACAAC 34829
Query 110453 ATTCAAAAAGAATCTACGTTGCAC 110476
|| ||||| ||||||||| | |||
Sbjct 34830 ATCCAAAAGGAATCTACGCTCCAC 34853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412638900708998
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |