Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq490 149 5e-31 seq5010 131 1e-25 seq2385 127 2e-24 seq263 127 2e-24 seq220 122 7e-23 >seq490 Length=81643 Score = 149 bits (164), Expect = 5e-31 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || ||||| || || ||||| ||||| |||| |||||| ||| ||||| || Sbjct 59260 TGGAGTGTAGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCGAGCTGC 59201 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| |||| | ||||||||| ||||| ||||| ||||| ||||| || ||| || Sbjct 59200 TTCCCTGCAAATATGAGTCTTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG-AATCTT 59142 Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||||| | || | ||||| || ||| || ||||| || ||||| || ||||| Sbjct 59141 TGCCTTGACGTTGTCAATGGTGTCTGACGATTCAACCTCAAGGGTAATAGTCTTACCAGT 59082 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||||||||||||||| Sbjct 59081 CAAGGTCTTAACAAATATCTGCAT 59058 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | || |||||||| || ||||||||||| || || || | ||||||| | Sbjct 58816 CGAAGCACAAGGTGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGACCA 58757 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||| ||||| ||| | |||| | ||||| ||||| || || ||||| ||| Sbjct 58756 TCCTCCAATTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTG 58697 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | ||| || ||| || || |||||||| || Sbjct 58696 TCCTGGATCTTGGCCTTGACATTGTCAATAGTATCTGAAGACTCAACCTCAAGAGTGATT 58637 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || ||||| || ||||| |||||||| Sbjct 58636 GTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 58602 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||| || || || || |||||||| || || || || | |||||| | Sbjct 59728 CGAAGAACCAGATGCAGGGTTGACTCCTTTTGAATATTGTAGTCTGCTAGGGTGCGCCCA 59669 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || || ||| | || | || || || || || ||||| ||||||||| Sbjct 59668 TCCTCAAGCTGCTTCCCCGCAAAGATGAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTG 59609 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || |||||||| |||||| | || | ||||| ||| ||| || ||||| ||||| Sbjct 59608 TCCTG-AATTTTTGCCTTGACATTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTTAT 59550 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || || ||||||||||| Sbjct 59549 GGTCTTGCCAGTCAGAGTCTTGACGAATATCTGCAT 59514 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || ||||| ||||| ||||||||||||||||| |||| || || Sbjct 59045 ACGGAGGACAAGGTGGAGCGTAGATTCCTTTTGAATGTTATAATCAGCAAGAGTACGTCC 58986 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | |||||||| || || || || |||||||| Sbjct 58985 ATCCTCAAGCTGCTTCCCTGCAAAGATGAGCCTTTGCTGGTCAGGGGGGATGCCCTCTTT 58926 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || | || ||||||| | || | ||||| || || || ||||| || || Sbjct 58925 ATCCTGGATCTTCGCTTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCAAGGGTGAT 58866 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| || || || || ||||| |||||||| Sbjct 58865 AGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCAT 58830 Score = 113 bits (124), Expect = 3e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || || || || || ||||| || || || | ||| || ||| ||||| ||| Sbjct 58576 TGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATCCTCGAGCTGT 58517 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | |||| | |||||| ||||| || |||||||| ||||| || |||||| Sbjct 58516 TTGCCAGCAAAGATCAGACGTTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG-AATTTT 58458 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | |||||| | || | || ||||| || || |||||||| || || ||||| || Sbjct 58457 GGCCTTGACATTATCAATTGTATCAGATGACTCGACCTCAAGAGTGATGGTCTTGCCTGT 58398 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| Sbjct 58397 CAATGTCTTGACGAAGATTTGCAT 58374 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || || ||||| || || ||||||||||| |||| ||||| Sbjct 59501 ACGGAGGACAAGGTGGAGTGTAGATTCCTTCTGGATGTTATAATCAGCAAGTGTGCGTCC 59442 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || || ||| | || | |||||||| ||||| || |||||||| || Sbjct 59441 ATCCTCGAGCTGCTTCCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGGGATACCCTCCTT 59382 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | || || || ||| || ||||| || || Sbjct 59381 GTCCTGGATCTTGGCCTTAACATTGTCGATGGTATCCGATGATTCAACCTCAAGGGTGAT 59322 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || ||||| |||||||| Sbjct 59321 GGTCTTGCCAGTCAGTGTCTTCACAAAGATCTGCAT 59286 >seq5010 Length=51657 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || ||||||||||| |||||||||||||| |||| ||| || | Sbjct 38734 CGGAGCACCAGGTGGAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTACGGCCA 38675 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || |||||||| | || | || ||||||||||| ||||| ||||| ||| Sbjct 38674 TCCTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTG 38615 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| || || | || | || || || || |||||||| || || Sbjct 38614 TCCTGGATTTTAGCCTTAACGTTGTCAATGGTATCCGAGCTCTCGACTTCAAGGGTGATG 38555 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||| | || || || || |||||||| Sbjct 38554 GTTTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 38520 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| || || ||||| || || || |||||||| || || | |||||| Sbjct 38051 ACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCC 37992 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||||||||| || ||| | ||||| || ||||||||||| || || ||||| || Sbjct 37991 ATCCTCGAGTTGTTTACCGGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCCTCCTT 37932 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| || | || | ||||| ||| ||| || || || || || Sbjct 37931 GTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGAT 37872 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | ||| || || || |||||||| Sbjct 37871 GGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 37836 >seq2385 Length=44452 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||| || || || || |||||||| || || || || | |||||| Sbjct 35092 CGAAGAACCAGATGCAGGGTCGACTCCTTTTGAATATTGTAGTCTGCTAGGGTGCGCCCG 35033 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | || | || ||||| ||||| ||||| ||||||||| Sbjct 35032 TCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCTTTG 34973 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| |||| ||||| | || | ||||| ||| ||| || ||||| || || Sbjct 34972 TCCTG-AATCTTTGCCTTGACGTTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTAAT 34914 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || |||||||| | ||| || ||||| ||||||||| Sbjct 34913 GGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATT 34877 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||||||||| ||||| || || ||||| ||||| || | ||| || | Sbjct 34636 CGGAGGACGAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGCCCA 34577 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||| || ||| | || | || |||||||| || ||||| ||||| || Sbjct 34576 TCTTCCAACTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCCTTA 34517 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| |||| |||||| | || | ||||| || || || ||||| || || Sbjct 34516 TCCTG-AATCTTTGCCTTGACATTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGAT 34458 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||| | || || ||||| |||||||| Sbjct 34457 CGTTTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 34422 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | || || || || || || || ||||| || || || Sbjct 34041 CCTCCACGAAGACGGAGAACAAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 33982 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| |||||||||||||||||| | |||| | ||||| ||||| ||| Sbjct 33981 AGGGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGA 33922 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || |||||| | || ||| | || | || || || || || Sbjct 33921 ATTCCCTCCTTGTCCTG-AATTTTGGCCTTAACATTGTCGATTGTATCGGATGACTCGAC 33863 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || || || || || || || || ||||| || ||||| Sbjct 33862 CTCAAGAGTGATGGTCTTCCCGGTCAATGTCTTTACAAAGATTTGCAT 33815 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || ||||| ||||| ||||| ||||| ||||| || | ||||| ||| || || || Sbjct 34852 TGGAGCGTAGATTCCTTTTGGATGTTGTAATCAGCCAAAGTGCGTCCATCCTCAAGCTGC 34793 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | || | |||||||| ||||| || || ||||| |||||||| | || Sbjct 34792 TTCCCTGCAAAAATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTG 34733 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| | || | ||||| || || || ||||| || || ||||||||||| Sbjct 34732 GCCTTAACATTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATCGTTTTGCCAGTC 34673 Query 29764 AAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| |||||||| Sbjct 34672 AGCGTCTTCACAAAGATCTGCAT 34650 >seq263 Length=97214 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| || || |||||||| || ||||| || || || || | |||||| | Sbjct 77863 CGGAGCACCAAGTGCAGGGTGGATTCCTTCTGAATATTGTAGTCGGCCAAGGTGCGGCCA 77922 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || ||||| | || | || ||||||||||| ||||||||||| ||| Sbjct 77923 TCCTCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATACCCTCCTTG 77982 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| ||| ||| | || | ||||| || || || ||||| ||||| Sbjct 77983 TCCTGGATTTTGGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACCTCAAGGGTTATG 78042 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || || || |||||||| Sbjct 78043 GTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCAT 78077 >seq220 Length=196394 Score = 122 bits (134), Expect = 7e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||| ||| || ||||| ||||| ||||||||||| || || | ||||| Sbjct 148783 ACGAAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTATAGTCTGCCAAAGTGCGCCC 148842 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | ||| ||||| |||||||| || ||||| || Sbjct 148843 ATCCTCCAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGCGGGATCCCCTCCTT 148902 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || || ||| | || | ||||||||| || || || || || || Sbjct 148903 GTCTTGGATCTTCGCCTTCACATTATCAATAGTGTCAGAGCTCTCCACCTCCAGGGTAAT 148962 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || ||||| | ||| || || || || |||||| Sbjct 148963 GGTCTTACCAGTGAGGGTCTTCACGAAGATTTGCATT 148999 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | | ||||||||| || || || ||||| || |||||||| || || || Sbjct 148999 TCCACCCCTAAGCCTCAGCACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCAGC 149058 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||||| ||| ||||| || || ||||| | || | || ||||||||||| || Sbjct 149059 AAGAGTGCGCCCATCCTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGGGG 149118 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || ||||| || ||| || | || ||| | || | ||||| || || | Sbjct 149119 AATGCCTTCCTTGTCCTG-AATCTTCGCCTTTACATTGTCGATGGTGTCTGAGCTCTCAA 149177 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || |||||||| | ||| || ||||| |||||||| Sbjct 149178 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 149226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385030062910326