Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq2845 98.7 4e-16
seq1579 98.7 4e-16
seq297 98.7 4e-16
>seq2845
Length=54259
Score = 98.7 bits (108), Expect = 4e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 1082 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 1023
Query 50170 CTGCTCTACTCCGC 50183
||||||||||||||
Sbjct 1022 CTGCTCTACTCCGC 1009
>seq1579
Length=164942
Score = 98.7 bits (108), Expect = 4e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 156077 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 156018
Query 50170 CTGCTCTACTCCGC 50183
||||||||||||||
Sbjct 156017 CTGCTCTACTCCGC 156004
>seq297
Length=119073
Score = 98.7 bits (108), Expect = 4e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 2248 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 2307
Query 50170 CTGCTCTACTCCGC 50183
||||||||||||||
Sbjct 2308 CTGCTCTACTCCGC 2321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181516321710132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |